Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C11.26.v1.A.SL4-1

Possible name(s)

UPP1; UPP2

Gene model

KH2012:KH.C11.26

Location

KhC11 [3,424,818 / 3,428,884]

Sequences

Amino acid sequence

Length: 334

>KH.C11.26.v1.A.SL4-1
FCKISFHTRLFFFKFLKVVRTFIMMAGCNSTFRLANPHLSDKETLYHLGISTDDNLQQRF
GDVKYVCLGGKNKRMENFANLLYRDLGYPDNSEVDDASKPKEERKLVDITGSAGRYSMFK
VGPVLSANHGIGPASLSVVLHELLKLIHFSHCSDVSFIRIGTSGGLGLDPGTVVITDTAY
NGLLQPHHAQVACGKEIHYPSFTNPDLRNGLLKCALTVTNQCVIGNTLSANDFYEEQARL
DGAVCSFSEEEKNAFIRRAHDECGVKNMEMESTCFTAMCLRAGVKCGVICVALVDRLVRD
NVTGVKGTGVGTDNKLKEWELLPQVICAKYIKEN

Nucleotide sequence

Length: 1,601

>KH2012:KH.C11.26.v1.A.SL4-1
GTTTTGTAAAATATCGTTTCATACAAGACTATTTTTTTTTAAGTTTCTGAAGGTCGTTAG
AACGTTCATTATGATGGCTGGATGTAATTCAACGTTTCGGTTAGCTAATCCCCACCTCTC
GGATAAGGAAACGCTCTATCACCTTGGAATTTCAACTGATGATAATTTACAACAGCGTTT
CGGCGACGTTAAGTATGTTTGCCTGGGAGGCAAAAACAAACGAATGGAAAATTTCGCGAA
CTTGTTATATCGTGATCTTGGCTATCCAGACAATAGCGAGGTAGATGACGCATCTAAACC
TAAAGAGGAAAGAAAATTGGTCGATATAACTGGATCCGCCGGTAGATATTCTATGTTTAA
AGTTGGTCCCGTTTTATCTGCAAACCACGGAATTGGACCAGCGTCCCTTTCTGTTGTTTT
ACATGAGTTGCTGAAGCTGATCCACTTCTCACACTGCAGTGACGTGTCGTTTATAAGGAT
TGGAACTTCAGGGGGCTTGGGGTTAGATCCGGGAACAGTCGTAATAACAGACACAGCCTA
CAACGGTTTATTGCAGCCTCATCATGCACAGGTGGCATGTGGAAAAGAAATTCACTACCC
GAGTTTTACCAACCCAGATTTAAGAAACGGTTTGCTAAAGTGTGCCCTGACCGTTACAAA
TCAATGTGTTATAGGAAACACTTTATCCGCAAACGACTTTTATGAAGAGCAAGCGAGATT
GGACGGTGCGGTTTGCAGCTTCAGCGAAGAAGAAAAAAATGCATTTATTCGAAGAGCCCA
TGACGAATGTGGAGTTAAAAATATGGAAATGGAAAGTACATGTTTTACAGCAATGTGTTT
AAGAGCGGGTGTGAAATGTGGCGTCATTTGCGTAGCCTTGGTTGATCGTTTAGTGAGGGA
CAACGTCACAGGCGTCAAAGGAACAGGAGTGGGAACAGACAACAAGCTAAAGGAGTGGGA
GTTATTGCCACAAGTTATATGCGCTAAGTACATCAAGGAAAATTAAGATGATTAAAAAAA
GTAGTGTTTTGTGGTCTTTTTACACAGGGCAAACGGTAAAAGTATAAGTTTCACAAAAGA
TTACAGGAATGGAATAAATATTTGTATATTTTTGTTAGACAAAAATTGTTGCGTGGTGTA
TAGCGTGTAGGGTTTAGTATATTCACTATATATGTATTGTTATGCTTTGTGTATTCGCTT
TGCAGAAAATAAAATATAATTCTATGGGGTAAGATGGATACCGTTAGCACATAATATCCA
ATATTTGTGAATCGGGTTTTGAACTATTAACAACGCTTTTTTTGAGTCGTGAAGATACTG
TTATATAATTCTGTAAATCTTACCCCAACGCGATGTACAAATTACAAGCAAAACTGTATA
GTGAACCACTGGTGTAATTATAAAATACCGCTGTAATTTTGAAATCATATTTCCTGTATA
CTGCATACACAAGTAGCTAAATATGGCTTGCTTACCAAATAACTATTTTTTTCTTTCTGA
TATTTCAATTTTTTGATACTTTTAAATTTACACGTATATGCAAAAACTATCACAAATTAT
TTCACACTGCTATAAATAAAATTATTCAACTGTAGAAAAAA

InterProScan

TIGRFAM	Uridine_phosphorylase_euk (IPR010059) - T[40-333] 1.4E-89
SUPERFAMILY	Nucleoside_phosphorylase_sf (IPR035994) - T[46-302] 4.15E-33
Pfam	Nucleoside_phosphorylase_d (IPR000845) - T[96-292] 8.3E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UPP1_HUMAN	39.672 %	224	1.12E-71
UPP2_HUMAN	40.924 %	230	8.06E-74