Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C11.26.v1.A.SL3-1

Possible name(s)

UPP1; UPP2

Gene model

KH2012:KH.C11.26

Location

KhC11 [3,424,818 / 3,428,896]

Sequences

Amino acid sequence

Length: 338

>KH.C11.26.v1.A.SL3-1
YFTRFCKISFHTRLFFFKFLKVVRTFIMMAGCNSTFRLANPHLSDKETLYHLGISTDDNL
QQRFGDVKYVCLGGKNKRMENFANLLYRDLGYPDNSEVDDASKPKEERKLVDITGSAGRY
SMFKVGPVLSANHGIGPASLSVVLHELLKLIHFSHCSDVSFIRIGTSGGLGLDPGTVVIT
DTAYNGLLQPHHAQVACGKEIHYPSFTNPDLRNGLLKCALTVTNQCVIGNTLSANDFYEE
QARLDGAVCSFSEEEKNAFIRRAHDECGVKNMEMESTCFTAMCLRAGVKCGVICVALVDR
LVRDNVTGVKGTGVGTDNKLKEWELLPQVICAKYIKEN

Nucleotide sequence

Length: 1,613

>KH2012:KH.C11.26.v1.A.SL3-1
GTATTTTACCAGGTTTTGTAAAATATCGTTTCATACAAGACTATTTTTTTTTAAGTTTCT
GAAGGTCGTTAGAACGTTCATTATGATGGCTGGATGTAATTCAACGTTTCGGTTAGCTAA
TCCCCACCTCTCGGATAAGGAAACGCTCTATCACCTTGGAATTTCAACTGATGATAATTT
ACAACAGCGTTTCGGCGACGTTAAGTATGTTTGCCTGGGAGGCAAAAACAAACGAATGGA
AAATTTCGCGAACTTGTTATATCGTGATCTTGGCTATCCAGACAATAGCGAGGTAGATGA
CGCATCTAAACCTAAAGAGGAAAGAAAATTGGTCGATATAACTGGATCCGCCGGTAGATA
TTCTATGTTTAAAGTTGGTCCCGTTTTATCTGCAAACCACGGAATTGGACCAGCGTCCCT
TTCTGTTGTTTTACATGAGTTGCTGAAGCTGATCCACTTCTCACACTGCAGTGACGTGTC
GTTTATAAGGATTGGAACTTCAGGGGGCTTGGGGTTAGATCCGGGAACAGTCGTAATAAC
AGACACAGCCTACAACGGTTTATTGCAGCCTCATCATGCACAGGTGGCATGTGGAAAAGA
AATTCACTACCCGAGTTTTACCAACCCAGATTTAAGAAACGGTTTGCTAAAGTGTGCCCT
GACCGTTACAAATCAATGTGTTATAGGAAACACTTTATCCGCAAACGACTTTTATGAAGA
GCAAGCGAGATTGGACGGTGCGGTTTGCAGCTTCAGCGAAGAAGAAAAAAATGCATTTAT
TCGAAGAGCCCATGACGAATGTGGAGTTAAAAATATGGAAATGGAAAGTACATGTTTTAC
AGCAATGTGTTTAAGAGCGGGTGTGAAATGTGGCGTCATTTGCGTAGCCTTGGTTGATCG
TTTAGTGAGGGACAACGTCACAGGCGTCAAAGGAACAGGAGTGGGAACAGACAACAAGCT
AAAGGAGTGGGAGTTATTGCCACAAGTTATATGCGCTAAGTACATCAAGGAAAATTAAGA
TGATTAAAAAAAGTAGTGTTTTGTGGTCTTTTTACACAGGGCAAACGGTAAAAGTATAAG
TTTCACAAAAGATTACAGGAATGGAATAAATATTTGTATATTTTTGTTAGACAAAAATTG
TTGCGTGGTGTATAGCGTGTAGGGTTTAGTATATTCACTATATATGTATTGTTATGCTTT
GTGTATTCGCTTTGCAGAAAATAAAATATAATTCTATGGGGTAAGATGGATACCGTTAGC
ACATAATATCCAATATTTGTGAATCGGGTTTTGAACTATTAACAACGCTTTTTTTGAGTC
GTGAAGATACTGTTATATAATTCTGTAAATCTTACCCCAACGCGATGTACAAATTACAAG
CAAAACTGTATAGTGAACCACTGGTGTAATTATAAAATACCGCTGTAATTTTGAAATCAT
ATTTCCTGTATACTGCATACACAAGTAGCTAAATATGGCTTGCTTACCAAATAACTATTT
TTTTCTTTCTGATATTTCAATTTTTTGATACTTTTAAATTTACACGTATATGCAAAAACT
ATCACAAATTATTTCACACTGCTATAAATAAAATTATTCAACTGTAGAAAAAA

InterProScan

TIGRFAM	Uridine_phosphorylase_euk (IPR010059) - T[44-337] 1.5E-89
SUPERFAMILY	Nucleoside_phosphorylase_sf (IPR035994) - T[50-306] 4.3E-33
Pfam	Nucleoside_phosphorylase_d (IPR000845) - T[100-296] 8.8E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UPP1_HUMAN	39.672 %	224	1.11E-71
UPP2_HUMAN	40.924 %	230	7.56E-74