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  1. Transcript 'KH2012:KH.C1.1230.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1230.v1.A.nonSL2-1

Possible name(s)

KH.C1.1230

Location

KhC1 [3,205,045 / 3,215,293]

Sequences

Amino acid sequence

Length: 813

>KH.C1.1230.v1.A.nonSL2-1
ENLFIEKHHKYYSNLLNPGIWTLGVHKESKFCEKMEEYYDDDRDEYAGLMDFGSTYYCKV
CDISCSGQSALDTHYAGKKHNKILRKKGLAVMDLSSNSFKTITTNVLENREESTAQQNFH
SLAKEEPVIGLEYVVEYRRKDGDGAITFFCELCNVASDSNIVYDHVCSTKHRVKYMKQHH
FDRYKAVTGYPNYIKQSNSTLSEKAFFHAKIIMGLYGGPEVIASVQVRENENGKIGQQPC
DIVVPFKKPIPINGIDDINLSQKEQELREKEEELNRREELLQQRKQVDPLALLNQSIYDK
IVKKIPGVVPKPGTNEFLPPVSHDVVHEPSHEQFHEKPPNVHEKPWFEHEDRAGPAVKNF
HGPPMNDFHGPPMNNFHGPPMNNFHEMHHPHDHRPRFMNRPRHNFPQNGPNMGRFPFYAP
PPRRNFFPHGPRPPREFFHHERDMRYHGPPRPMRPPPPHFLRGPHPHDFLPRDYDPVSHE
LQVSREREEHQNRLVIDYLLSTFDDHGLEREIILQMNNVERKQLYLLVVERKNYKDNLAR
MRDNMRQMGTVLSKPEEEKREKMENLLVQVKREIRDLVTTTMSKYKDPLQPSTSRRRSPS
IERHESRSRKRSPSIDRYDPCNSPRRGSPRRHRETRNSVSPDRYRTKDSRKYRRSPERGR
RYRKYSDCDLERGSRDRTPPRRSRERYNDRERPRRDERDSPEDRRGFPQDDVPLKRHRSN
SIIDVNTKSGVTDALEKIKMALQNQPAVQAALAVWSGKADSSKSTDYESKSQIEDRSNIR
KEQNEYEFRENVDFEQPKNRDRPRKLQHDNYRW

Nucleotide sequence

Length: 2,616

>KH2012:KH.C1.1230.v1.A.nonSL2-1
AGAGAATTTGTTTATTGAAAAGCATCACAAGTACTATTCAAACCTACTAAACCCTGGAAT
TTGGACGCTTGGAGTTCATAAAGAATCTAAATTTTGCGAGAAGATGGAAGAATACTATGA
CGATGACAGAGATGAGTATGCTGGGTTAATGGACTTTGGATCCACATATTATTGCAAGGT
TTGTGATATTTCTTGCTCTGGACAAAGTGCATTGGACACACATTATGCTGGGAAAAAGCA
CAACAAGATTTTGCGTAAAAAGGGTCTTGCTGTCATGGACTTGTCCAGCAATAGTTTCAA
AACCATCACAACTAATGTTTTGGAAAACAGAGAAGAATCGACTGCGCAACAAAACTTTCA
TAGTCTTGCAAAGGAAGAACCAGTTATTGGCCTTGAATATGTAGTTGAATATAGGAGAAA
GGATGGGGACGGTGCAATAACTTTCTTCTGCGAGTTGTGTAATGTTGCGAGTGATTCTAA
CATTGTCTACGACCATGTGTGCAGTACAAAACATCGGGTCAAGTACATGAAACAACATCA
TTTTGATCGATACAAAGCTGTCACTGGGTATCCTAACTACATCAAGCAAAGTAATTCAAC
GCTTAGTGAAAAAGCATTCTTCCATGCCAAGATTATAATGGGTTTATATGGCGGGCCAGA
GGTGATTGCTTCTGTACAAGTTCGAGAGAACGAAAACGGCAAAATTGGACAGCAACCATG
TGACATTGTCGTGCCTTTCAAAAAGCCTATCCCTATAAATGGTATTGATGATATAAATCT
GTCTCAAAAAGAACAAGAACTCCGGGAAAAGGAAGAAGAGTTAAACAGGAGAGAGGAATT
GTTGCAACAGCGCAAGCAGGTGGATCCACTTGCTTTGCTAAATCAAAGTATTTATGATAA
AATAGTAAAGAAGATTCCTGGAGTGGTCCCAAAACCTGGGACTAATGAATTTCTTCCACC
TGTTTCCCATGATGTGGTCCATGAACCTTCTCATGAGCAGTTTCATGAAAAACCGCCAAA
CGTTCATGAAAAACCTTGGTTCGAGCATGAAGATCGAGCAGGACCTGCCGTGAAAAATTT
TCATGGGCCTCCTATGAATGATTTTCATGGCCCTCCCATGAATAATTTTCATGGCCCTCC
CATGAATAATTTTCATGAAATGCATCATCCTCATGATCACCGCCCACGTTTCATGAACAG
ACCACGTCACAATTTTCCACAAAATGGACCAAATATGGGTCGATTTCCATTTTACGCACC
ACCACCACGACGAAATTTTTTCCCTCATGGCCCCCGTCCGCCTCGTGAGTTTTTCCATCA
TGAGCGTGATATGCGATATCACGGGCCACCTCGACCAATGAGACCACCTCCACCTCATTT
CTTACGTGGACCACATCCACATGATTTTCTACCTCGTGATTATGATCCTGTATCACATGA
ACTACAGGTTTCACGGGAAAGAGAAGAACATCAAAACAGGCTGGTAATTGATTACTTGTT
AAGTACGTTTGATGACCATGGGTTGGAGAGAGAAATAATTCTCCAAATGAATAACGTGGA
ACGAAAACAGCTTTATCTGCTTGTTGTGGAAAGAAAGAACTATAAAGACAATTTGGCACG
GATGAGAGACAACATGCGTCAAATGGGAACTGTCCTATCTAAACCAGAAGAAGAGAAAAG
AGAAAAAATGGAAAATTTATTGGTCCAGGTAAAACGAGAGATACGAGATCTGGTTACCAC
CACTATGTCCAAGTATAAGGATCCTTTGCAACCTAGCACAAGCAGAAGACGATCACCATC
CATAGAGAGACATGAAAGTAGAAGCAGAAAACGTTCTCCTTCAATAGATAGATATGATCC
TTGTAACTCTCCAAGGCGAGGTAGTCCAAGACGCCATCGTGAAACTCGAAACAGCGTTTC
ACCTGATCGTTATAGAACTAAAGATAGTCGGAAGTACAGAAGATCTCCTGAGCGTGGTAG
GCGATATAGAAAATACTCTGATTGTGATTTGGAACGTGGTTCACGTGATAGGACTCCACC
CAGAAGGTCACGGGAGCGTTATAATGATCGTGAGAGACCACGTCGTGATGAAAGAGATTC
CCCAGAGGACCGTAGAGGCTTCCCCCAAGATGATGTTCCGCTAAAGCGTCACAGATCTAA
CAGTATAATTGATGTGAACACAAAGTCCGGTGTCACTGATGCTCTAGAAAAGATAAAAAT
GGCGCTTCAAAATCAACCAGCTGTGCAAGCTGCTCTTGCAGTCTGGTCTGGTAAAGCAGA
CAGCAGTAAAAGCACAGATTATGAAAGTAAATCGCAAATAGAAGATCGTTCAAACATAAG
AAAAGAACAAAATGAATATGAATTTCGTGAAAATGTGGACTTTGAGCAACCTAAGAATCG
GGATAGGCCCAGGAAATTACAGCATGACAATTATCGCTGGTAATTTTCATCATGTTCTTT
TTTTAACCATCTGTTATTTATGTTTAACTGTATCTGCTACAAATACATACCAATTTTCTG
TTGCTTTATTGTGGCGTTTTGTGGGATACAAATTTTGATCTGTTAGAATGGGACTTTTTA
TTGAGGAATTGTCAACATTAAAACACTAATATTGTA

InterProScan

SMART
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[53-87] 4.0E-8 - T[145-178] 0.53
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[54-87] 4.66E-9
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[58-80] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value