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  1. Transcript 'KH2012:KH.S1764.3.v1...' > 
  2. Transcript 'KH2012:KH.C1.1176.v1...' > 
  3. Clone 'cign038h11' > 
  4. Clone 'cilv014i06' > 
  5. Transcript 'KH2012:KH.C11.220.v1...'

Transcript Model

Transcript Id

KH2012:KH.C11.220.v1.A.SL1-1

Possible name(s)

BMI1; COMMD3-BMI1; PCGF2

Gene model

KH2012:KH.C11.220

Location

KhC11 [3,308,601 / 3,314,247]

Sequences

Amino acid sequence

Length: 1,198

>KH.C11.220.v1.A.SL1-1
VFVIVHYAVIMNRSVKLRVRDLHPHVTCHLCNGYFIDATTIIECLHSFCRTCIVRYLENR
RSCPVCRVQVHKTRPLLNIRSDQTLQDIVYKLVPGLRSDEMKRRRRFWGENPESKKDFAI
WRELSPEELGDADQFDVATFSSKVTLVLENLKRRNKKADDLRQWSEIASSLSKRYLRTSQ
DLTVNHLHKFLRAKLNEPISTEIVMLCGENVLPPTYTLADVRDTFSPVDHLLHLTYCIFV
PRSLKRKPPPQRVTEKVDVEAKSRKTVAKKSSFRKKSATPHLKAFFNSQISPPTTEKQQR
PFLKPISDYRKQDEIESLREAEEQKLIEWAAARDTRAKLPLFEKLQLTTVQRAAAIKRAA
LYKLANQKKAKEKQEYINSAASSSVQKLPQKKLDSQNEQTKLKSTKNEYKVTSQVPKGTN
SPRRNIKQGSNEQFPSTGRWLNKQNNNRTRPTRVKCYSVLNIPVDEAVRSKPPTPVVDPL
CPPVVLKRSSADPDNEAPPTKMKPFVQRTANNEVPMLNLSEHGNNKVAPKQQQFQRNRRK
PIHPTHHASAGRTDSPGTVLLQKIDTSKTQFSTTPTRPISREPDRQQPGFDTIRIQSPNN
GKFILLSTEGMERGHSQSHPAGLSMKLHSQMQQNRSSNDPRKLDNQGTMLNTANQDSQNK
SQLQTRINSQAHRAALDAVRNTMGKVLLQAERPRQMPLKRPILPKGVSKPIHTGVGSIPI
RLPTNQTRNIFQNEQVIYPMNKTVASSAASTSQSKAPIRTQPKPSPKSLSNNELEQLKKL
REQQDFLNKLTEAAAINQLANRKKSSTDNSPQTSNQSPSTFRIKQHLSSQDNNRGRPPVL
QADARVIPSPRFSQPSPAPRFQKPITQKPFERINSTSTRGRFQNSAPVSSPSLNRNSFPM
RPTPQPNSNSHVNKQAQFTRLASGVQINSRPQQPSAKTLLLQSRAQDRPVGITPAEMQQR
RQQYKTNPSTSIANNGRYNQQFGSRPPRFQQQQQQHPLPVPRQFMLPKSNTNPRQQTFQL
RSSPNASMNRHPIATNQRTRQVPSIIRRSFEKMNPRPKSVTPTNRGQIQARSNLHSRQAH
VRVRSTSHEVLAPTATPPAGTKSPWSSRGYPLPAVPTAHPSEYATQHEIHKPPLAHQQPS
SNNFARASTSIKTNALPLSDMQPLELTAKKNTNSTKQTIDDGAGQSNSDQPLCLVMKK

Nucleotide sequence

Length: 3,731

>KH2012:KH.C11.220.v1.A.SL1-1
CTTTTCCCGTAGTTCTAATAATAGCGACTGTCATTTCCCAAATCCAAATTAAGTCTTTGT
GATTGTTCATTATGCCGTCATAATGAACCGAAGTGTAAAATTGCGTGTGCGTGACCTGCA
CCCGCATGTCACGTGTCATTTGTGCAATGGATATTTCATAGACGCAACAACGATCATTGA
ATGTCTACATTCGTTTTGTCGAACATGCATTGTTCGTTACTTGGAGAACCGTCGTTCTTG
CCCAGTATGCAGAGTACAAGTCCACAAAACTCGACCCTTATTAAACATAAGAAGCGACCA
GACTTTACAAGATATTGTCTACAAGCTTGTACCAGGGCTTCGTAGTGATGAGATGAAACG
ACGCAGGCGGTTTTGGGGTGAAAACCCAGAGTCTAAAAAAGATTTCGCAATTTGGCGCGA
ACTTTCACCCGAAGAACTGGGAGACGCTGACCAATTCGACGTCGCCACGTTTTCGTCAAA
AGTCACGTTGGTATTGGAGAATCTGAAAAGGCGAAACAAGAAAGCAGACGATCTACGACA
GTGGAGCGAGATCGCATCCAGTTTAAGCAAAAGATATTTAAGAACATCCCAAGACCTAAC
TGTCAATCACCTGCATAAGTTCCTAAGAGCAAAACTGAACGAACCTATTTCCACTGAGAT
CGTGATGCTATGTGGTGAAAACGTTCTGCCGCCGACTTACACGTTAGCCGATGTAAGAGA
CACTTTTTCACCAGTGGACCACCTTCTACACCTGACATACTGTATTTTCGTGCCACGATC
TTTAAAAAGAAAACCCCCTCCGCAGCGTGTGACGGAAAAAGTCGACGTCGAGGCAAAAAG
TCGAAAAACTGTCGCTAAGAAATCGTCGTTCAGGAAAAAATCGGCAACGCCGCATCTAAA
GGCTTTTTTCAACAGCCAAATCTCACCACCAACCACCGAAAAACAGCAACGACCGTTCCT
GAAACCAATATCAGACTATCGGAAACAGGACGAAATTGAAAGTCTTCGGGAAGCGGAGGA
ACAAAAGCTGATTGAGTGGGCAGCGGCACGAGACACGAGAGCCAAGCTGCCATTATTTGA
AAAACTCCAGCTAACAACTGTACAGCGGGCCGCTGCGATAAAGCGAGCTGCTTTGTACAA
GCTAGCAAACCAAAAGAAGGCGAAAGAAAAACAGGAATACATTAACTCAGCAGCCTCGTC
CAGCGTTCAAAAACTTCCACAGAAAAAACTAGACTCTCAAAACGAGCAAACGAAACTGAA
ATCAACTAAGAACGAGTACAAAGTGACATCGCAAGTACCAAAAGGAACAAATTCCCCGAG
ACGTAATATCAAACAAGGAAGTAATGAACAGTTTCCTTCCACGGGCCGGTGGCTGAACAA
ACAGAACAATAATCGGACACGACCTACAAGAGTCAAATGTTACTCCGTACTAAACATTCC
CGTCGACGAAGCTGTAAGAAGTAAACCCCCTACCCCTGTTGTTGACCCACTATGTCCGCC
CGTTGTGTTAAAGCGCAGTTCGGCCGATCCCGACAACGAAGCACCGCCGACCAAGATGAA
GCCCTTTGTACAACGTACAGCGAACAACGAAGTCCCAATGTTGAATTTAAGCGAGCATGG
GAATAATAAAGTCGCGCCCAAGCAACAGCAGTTCCAGCGTAATCGTAGAAAACCAATACA
CCCTACACACCACGCTAGCGCGGGACGTACTGATTCACCCGGCACCGTTTTGCTACAAAA
AATCGACACCAGCAAGACCCAGTTTTCAACTACCCCGACACGTCCTATATCTCGTGAGCC
GGACCGCCAGCAGCCAGGCTTCGATACCATACGCATACAGTCACCAAACAATGGGAAATT
TATTCTCCTTTCAACAGAGGGCATGGAGAGGGGTCACAGCCAGTCTCATCCAGCCGGTCT
TTCGATGAAGTTACATTCCCAGATGCAGCAAAATAGGTCGTCAAATGATCCACGTAAGTT
GGATAACCAAGGCACAATGTTAAACACAGCAAACCAAGACAGCCAGAACAAAAGTCAACT
CCAAACCCGAATAAACTCTCAAGCGCATAGAGCGGCCCTAGACGCGGTCAGAAACACGAT
GGGGAAAGTTCTATTACAAGCAGAACGACCGAGGCAAATGCCACTAAAAAGGCCTATCCT
TCCTAAAGGCGTATCCAAACCTATACACACAGGCGTGGGTTCCATACCGATTCGCTTGCC
TACAAATCAAACTCGTAACATCTTTCAAAACGAGCAGGTTATCTACCCAATGAACAAAAC
TGTCGCCTCATCGGCGGCAAGTACCAGTCAAAGTAAAGCTCCAATTAGAACGCAACCAAA
ACCGTCCCCGAAATCTTTAAGCAACAACGAGTTGGAGCAACTGAAGAAGCTTCGGGAACA
GCAGGACTTTTTAAACAAGCTTACCGAGGCCGCAGCCATCAACCAATTAGCGAACCGCAA
AAAGTCATCGACTGACAACTCCCCCCAGACGAGCAACCAATCCCCTTCAACGTTCCGAAT
AAAGCAACACTTGTCCAGTCAGGACAACAACAGAGGGCGGCCCCCCGTTTTGCAAGCAGA
TGCACGCGTTATACCGAGTCCTCGTTTCAGCCAACCAAGTCCGGCTCCTCGGTTCCAAAA
ACCCATCACTCAAAAGCCGTTCGAAAGAATCAATTCCACGTCAACTAGAGGACGATTTCA
GAATAGCGCACCAGTTTCAAGTCCATCTTTAAACCGAAACTCCTTTCCGATGCGCCCAAC
ACCCCAACCAAATAGTAATTCCCATGTAAATAAACAGGCACAGTTCACTCGCCTTGCCAG
CGGCGTCCAAATAAACTCCAGACCACAGCAGCCATCAGCTAAAACTTTACTTCTCCAATC
CCGAGCACAAGATCGACCGGTCGGAATAACACCAGCAGAAATGCAGCAAAGACGACAGCA
ATACAAAACCAACCCTTCAACAAGTATAGCAAATAATGGCCGCTACAATCAACAATTCGG
CTCAAGACCTCCGCGTTTTCAACAACAACAACAGCAACACCCCCTCCCAGTTCCGCGCCA
GTTTATGCTCCCAAAATCAAACACAAATCCCCGCCAACAAACTTTCCAGCTTCGTTCGAG
CCCAAACGCTTCAATGAATCGTCACCCCATCGCAACAAACCAAAGAACGCGACAGGTACC
CAGTATAATACGACGTTCGTTCGAAAAAATGAATCCGCGTCCAAAATCAGTTACACCAAC
AAACCGCGGCCAAATACAAGCGCGTAGCAACTTACACTCGCGCCAAGCTCACGTTAGAGT
ACGCTCAACTTCACATGAAGTTCTTGCGCCAACTGCAACACCGCCTGCAGGTACAAAAAG
CCCGTGGTCTTCCCGCGGCTACCCTCTCCCCGCTGTCCCGACCGCGCACCCCTCTGAGTA
CGCCACCCAGCATGAAATCCACAAGCCCCCACTAGCCCACCAGCAACCAAGTAGCAATAA
CTTCGCCCGGGCTTCAACGTCAATCAAAACAAACGCTCTACCACTATCTGATATGCAACC
ACTTGAACTTACAGCGAAAAAAAACACGAATTCTACCAAGCAAACGATCGACGACGGTGC
TGGCCAATCTAACAGCGACCAACCGTTATGTTTAGTGATGAAGAAATAACTCAAACCATA
TCATTATTTTTTAAATAATAAAAAGTGTTTTCATACTAGCCATTATTACAAATTATTAAA
TTCGTTCATAT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[11-117] 4.4E-27
ProSiteProfiles
Znf_RING (IPR001841) - T[28-67] 12.253
SMART
Znf_RING (IPR001841) - T[28-66] 1.1E-5
ProSitePatterns
Znf_RING_CS (IPR017907) - T[44-53] .
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[166-238] 6.72E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PCGF3_HUMAN 36.325 % 146 1.91E-39
PCGF2_HUMAN 46.083 % 199 1.62E-56
BMI1_HUMAN 48.165 % 205 8.79E-59