- Transcript 'KH2012:KH.C11.210.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.210.v2.A.SL2-1
Possible name(s)
ACTN2; ACTN4
Gene model
Location
KhC11 [4,007,146 / 4,023,014]
Amino acid sequence
Length: 873
>KH.C11.210.v2.A.SL2-1
EGLLDPAWERQQRKTFTAWCNSHLRKAGTQIEHIEEDFRNGLKLMLLLEVISGEQLPKPD
RGKMRFHKIANVNKALEFIASKGVRLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISV
EESSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKDGLAFCALIHRHRPDLIDYDKLRKDDP
LTNLQTAFEVAEKHLDIPQMLDAQDIFEMAKPDERSIMTYVAAFYHAFSGNDKAETAANR
ILKVLGLNQENERLMDEYERLASDLLEWIERMKPWLEDRTTDNTMEGVQRKLDDFRDYRV
KQKPPKTEEKGHLEAAYNTLQTKLRLSNRPAFMPSEGKLVQDIANAWKGLEGAEKGYEEW
LLAEMRRLERLDHLAKKFYHKAGIHQKWSRGQEEALASEDYKVCTFQEVKALMKKHEAFE
SDLAAHQDRVEQIAAIGQELNDLDYHDARTINDSCAAICNEWDRLGDATQKRRTALENIE
QILDSIEQQHLEFAKRAAPFNNWLDGAKEDLEDMFIVHSIDEIKGLIEAHVSFKDTLPQA
QKEEESISALVQNIKKIQRQYGLPEQVCVNTYSTISEEELREKWRTVCDMVPVRDASLQT
ELSKQKRHELLRNEFAQIANELYPWITKITKDTNRISMEMVGSLEEVKNSLVEFQQKMVA
QVPKLEALEKKHQEMQDELVFDNILTPHTMEAIHTAWEHLKTTIALTINEVENQILMRDA
KGLTQEQMNEFRSSFNHFDRDQNGTLHPENFRGCLIMAGLDVTPDTVQGEAEFQRIMALV
DPSGTNNVTFQSFIDFMTRESTDSDTAEQVVESFRILAGDKPYITAQELRNELPPDQAEY
CISRMSRYSAGDAPGDALDYESFSTALYGESDL
Nucleotide sequence
Length: 3,141
>KH2012:KH.C11.210.v2.A.SL2-1
AGAAGGACTCCTCGACCCAGCGTGGGAGAGACAGCAACGGAAGACCTTCACAGCCTGGTG
CAACTCCCACCTTAGGAAGGCTGGCACACAGATTGAGCATATCGAGGAGGATTTTCGTAA
CGGACTGAAACTCATGTTGTTATTGGAGGTGATATCCGGGGAACAACTGCCAAAACCTGA
CCGTGGTAAAATGAGGTTCCACAAGATTGCCAACGTTAACAAAGCTCTGGAGTTTATTGC
AAGCAAAGGAGTTCGCTTGGTGTCTATTGGTGCAGAAGAAATCGTGGACGGGAATGCAAA
GATGACACTGGGTATGATCTGGACCATTATCCTCAGATTCGCTATCCAAGATATCTCAGT
GGAAGAATCTTCTGCCAAAGAAGGATTATTGTTGTGGTGTCAACGTAAAACTGCCCCATA
CAAGAATGTTAACGTGCAGAACTTCCATATGAGCTGGAAAGATGGTTTGGCTTTCTGTGC
CCTTATTCACAGGCATAGACCAGATCTTATCGACTATGATAAACTACGAAAGGACGACCC
ATTGACCAATCTGCAAACAGCGTTTGAAGTCGCAGAGAAACATCTTGACATCCCACAGAT
GTTGGACGCTCAAGACATTTTCGAAATGGCGAAACCAGATGAGCGTTCTATCATGACTTA
CGTTGCCGCATTCTATCATGCGTTCTCTGGCAACGATAAGGCCGAAACTGCAGCAAACAG
GATCTTGAAGGTTCTTGGTTTGAACCAGGAGAATGAAAGATTGATGGATGAGTATGAGAG
ACTTGCATCTGATTTGCTGGAGTGGATTGAAAGAATGAAGCCGTGGCTTGAAGACCGTAC
CACGGACAACACCATGGAAGGCGTGCAAAGAAAACTTGACGACTTCAGAGATTACAGAGT
GAAGCAGAAACCACCAAAGACTGAAGAGAAAGGTCATTTGGAGGCAGCATACAACACTCT
GCAGACGAAGCTTCGTCTCAGCAATCGACCAGCGTTCATGCCATCGGAGGGCAAGTTGGT
ACAAGATATCGCGAATGCATGGAAAGGATTGGAAGGAGCAGAGAAAGGATATGAAGAGTG
GCTGCTTGCTGAGATGAGAAGGTTAGAGCGACTTGACCATCTTGCCAAGAAGTTTTACCA
CAAAGCTGGAATTCATCAGAAGTGGTCTCGTGGTCAGGAAGAAGCTCTCGCATCAGAGGA
TTATAAAGTTTGCACCTTCCAAGAAGTCAAGGCTTTGATGAAAAAACATGAAGCGTTTGA
AAGTGATTTGGCTGCCCATCAAGACAGAGTTGAACAAATTGCTGCTATTGGTCAAGAACT
CAATGATCTTGACTACCACGATGCTCGTACCATCAATGATAGTTGTGCAGCCATCTGTAA
TGAATGGGATCGACTTGGTGATGCAACTCAAAAGCGAAGAACTGCTCTTGAGAACATCGA
GCAAATCTTGGATTCCATTGAGCAGCAACATCTGGAGTTTGCCAAAAGAGCCGCTCCCTT
CAACAACTGGTTGGATGGAGCAAAGGAAGACTTGGAAGATATGTTTATCGTGCATTCTAT
TGACGAGATTAAGGGCTTGATTGAAGCTCATGTCTCGTTCAAAGACACGCTTCCACAAGC
ACAGAAGGAAGAGGAAAGCATCAGCGCTCTTGTACAGAACATTAAGAAGATACAGCGACA
ATATGGCTTGCCTGAACAAGTCTGTGTCAACACGTACTCAACTATTTCCGAAGAGGAACT
TCGAGAAAAGTGGAGGACAGTGTGTGACATGGTCCCTGTGCGTGACGCTTCACTACAAAC
TGAACTAAGCAAACAGAAACGCCACGAACTGCTAAGAAACGAATTCGCTCAGATCGCCAA
CGAACTTTATCCATGGATTACTAAGATCACAAAGGACACCAACCGTATCTCAATGGAAAT
GGTTGGCTCACTGGAAGAAGTAAAGAATAGTCTCGTTGAGTTCCAACAGAAGATGGTCGC
TCAAGTTCCTAAACTTGAAGCTTTGGAGAAGAAACACCAGGAAATGCAAGACGAGTTAGT
GTTTGATAACATATTAACCCCACATACCATGGAAGCGATCCACACAGCGTGGGAACATCT
TAAAACAACAATCGCGCTCACAATTAACGAGGTTGAGAACCAAATCCTCATGCGCGATGC
CAAGGGATTGACACAAGAACAAATGAACGAGTTCCGATCTTCATTCAACCATTTCGACCG
GGACCAAAACGGCACGCTACACCCCGAAAATTTCCGTGGCTGCCTTATTATGGCAGGCCT
TGATGTGACACCGGACACGGTGCAGGGTGAAGCCGAGTTCCAACGTATCATGGCACTTGT
TGATCCAAGTGGAACAAACAACGTTACTTTCCAAAGTTTCATTGACTTCATGACCCGTGA
AAGCACGGATTCTGACACGGCCGAACAAGTTGTCGAATCTTTCCGTATTCTCGCCGGTGA
CAAGCCTTACATCACTGCCCAAGAGTTGAGAAACGAGTTGCCACCCGATCAGGCCGAGTA
TTGCATCAGTCGTATGTCTCGTTACAGCGCAGGGGATGCACCAGGCGATGCACTCGACTA
CGAAAGCTTCTCTACCGCCCTCTATGGGGAGTCTGATCTTTAAACCGCGCAAGCGATATT
TTATTTCTATATCAATGGACACAACAGCAAACAATTATGTTTTGCTGCCCCCCCACATAA
TGAAATCAGATTTTTATTAGCAGTATATATAATCAGTTTAGTTTGTGTACTATACTCTAA
TTCTTGTGAACTTCCAAAGCCTGAAATAATCGGCCGCGTAATGACGTAATCAAATAAATA
ATCTGCCATCCAGTTTTAGCCACGTATGTGCTAGTGGTATTAACATGATGCCACAAAGTA
GTGTTAACGCTCGCGATCGCTTCAATGGCAGCCAATATAATTTACAACTCATGCTCTTGC
TTACATGGCTGCAATAATTAACCACAAACGCACCGACCTGCCCCATTACTCCGCTCGTTT
CTGGGTGACTTTTACTTTAAATACAACTCCAATACTTTTTTCACCAAACATCCTTTTTTC
AATTTGACCTTTACTAAAAATAGAGTGCTTTTTAATGGACGAATTTATTACAAGTTGTCC
AACTAATGCCTTCCTTTCACC
| Gene3D |
CH_dom_sf (IPR036872) - T[4-118] 8.0E-44 - T[119-238] 6.6E-52 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[4-228] 7.66E-85 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[10-114] 17.204 - T[123-226] 17.247 |
| Pfam |
CH-domain (IPR001715) - T[11-114] 2.2E-23 - T[124-229] 5.1E-28 |
| ProSitePatterns |
Actinin_actin-bd_CS (IPR001589) - T[12-21] . - T[86-110] . |
| CDD |
CH-domain (IPR001715) - T[12-114] 5.05618E-22 - T[124-228] 2.11253E-27 |
| SMART |
CH-domain (IPR001715) - T[12-112] 2.5E-23 - T[125-224] 7.3E-26 |
| Pfam |
Spectrin_repeat (IPR002017) - T[254-362] 1.0E-11 - T[374-478] 6.9E-22 - T[489-599] 1.9E-11 - T[612-712] 3.5E-8 |
| SMART |
Spectrin/alpha-actinin (IPR018159) - T[256-362] 1.1 - T[376-477] 2.3E-21 - T[491-599] 3.3E-4 - T[613-712] 4.2 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[712-864] 1.78E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[726-761] 12.031 - T[768-803] 8.99 |
| CDD |
EF_hand_dom (IPR002048) - T[730-798] 3.86995E-9 |
| SMART |
EF_hand_dom (IPR002048) - T[730-758] 0.75 - T[772-800] 0.98 |
| Pfam |
EF-hand_Ca_insen (IPR014837) - T[803-869] 1.7E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTN2_HUMAN | 68.119 % | 1237 | 0 |
| ACTN1_HUMAN | 67.164 % | 1215 | 0 |
| ACTN4_HUMAN | 66.935 % | 1206 | 0 |