- Molecular Tool 'Tbx2/3 mRNA injection' >
- Transcript 'KH2012:KH.C1.1168.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1168.v1.A.nonSL3-1
Possible name(s)
DAW1; NOL10; WDR5B
Gene model
Location
KhC1 [6,596,643 / 6,605,115]
Amino acid sequence
Length: 705
>KH.C1.1168.v1.A.nonSL3-1
KIIMQVSNPNNIKIYNLSSGKSLPEFITDKKKRSLQKKDVDLRRRIELIQDFGMPTVSTT
VKMSPDGQYIFATGTYKPRVRCYDVNHLSVKFERCLDSEAVAFDILSEDYSKLVFLLSNR
TIELHTQQGRHYSVRMPKFGRDLCYHPANCDLMLVGAGSEIYRLNLDQGRFLKSYATSSP
ELNCVTINPEHHLVVVGGVDGRVECWDPRSRQAVGVLDCSTSLQHCVTDDVVPKVTCLKY
KGPLNLAVGTSTGQVMLYDIRSNRPYVVKDHRYELPINSIAFNDDNGIVISSDSRAVKLW
KENTGEAVTAVEMESDINNMYVVDNSGLFFLANESPKIHSYFIPMLGPAPKWCSFLDNIT
EEMEENPVQEIYDDYKFLTQKEVQTLGLSNLVGTSLLRAYMHGYFIDIRLYHKAMAVANP
FAYKEYRKRKIEERVEEARANRVHVKKLPKVNRHLADRLMTRAADEELKSGKKKKMKREA
ANLLDDPRFKSMFEDPNFQVDEESEEFKLLNPVVSKQFEKTKAKEEKLAQFPKIQEDSDG
DHGSHDESDDFASSDEEDKKWVKEAKKSKQKSKSAPQRPLVDKQQQKKMSKPQIFHLKDD
VDPGKPFTLQDLDKLGCEEANQKREAKKSATLEERVRESEKKGGISRLVHSDLTSGGKQA
TFRMNKVTKESVRKDLEKEHRDERRRIRRPASKLKTAKRKNSFFK
Nucleotide sequence
Length: 2,890
>KH2012:KH.C1.1168.v1.A.nonSL3-1
AGAGTGTTTTGGTTTTGTTTAGATAGGTTTTAGCTTAAAATGGGTTTTGGTAGTCTCTGA
ACCTAAAAAATCATTATGCAGGTATCAAATCCAAACAATATTAAAATCTACAATTTGAGC
AGCGGAAAGTCCTTACCTGAGTTCATCACTGATAAGAAGAAACGATCACTCCAGAAGAAA
GATGTTGATCTCAGGAGAAGAATTGAACTTATTCAAGATTTTGGGATGCCTACTGTCAGT
ACCACTGTAAAGATGTCTCCAGATGGGCAATATATCTTTGCTACAGGAACGTACAAACCC
AGAGTAAGGTGCTATGATGTCAATCATTTATCAGTTAAGTTTGAAAGATGTCTGGATTCT
GAAGCTGTTGCGTTTGATATTTTATCGGAAGATTATTCCAAGCTTGTGTTTTTACTGAGT
AATCGAACAATTGAACTGCACACACAGCAAGGGAGGCACTACAGTGTACGGATGCCAAAG
TTTGGCCGGGATTTGTGTTACCACCCAGCTAATTGTGACCTTATGCTTGTTGGTGCCGGA
TCTGAGATTTACCGTTTGAATCTTGACCAAGGAAGGTTCTTAAAATCTTATGCAACCAGT
TCACCTGAATTGAATTGCGTAACAATCAACCCTGAGCATCATCTAGTGGTGGTTGGTGGG
GTGGATGGAAGAGTCGAATGTTGGGATCCAAGATCAAGACAAGCAGTTGGTGTCTTGGAT
TGTAGCACTTCACTACAACATTGTGTGACAGATGATGTTGTTCCAAAAGTAACTTGCTTG
AAATATAAAGGACCACTCAACTTGGCTGTTGGAACAAGTACTGGACAGGTGATGTTATAC
GACATACGTAGCAACCGACCATATGTGGTGAAGGACCACAGATATGAACTTCCAATTAAC
TCTATTGCGTTTAATGACGATAATGGAATTGTAATCTCATCAGATTCGAGAGCTGTTAAA
CTATGGAAAGAAAATACGGGTGAAGCTGTTACTGCCGTAGAAATGGAGTCGGATATCAAC
AACATGTATGTGGTCGATAACTCAGGTCTCTTCTTTCTTGCAAACGAAAGCCCAAAGATT
CATTCCTACTTTATTCCTATGCTTGGACCAGCACCCAAATGGTGTTCATTCTTGGACAAT
ATAACAGAAGAAATGGAAGAGAATCCTGTCCAAGAAATTTACGATGATTACAAATTCCTT
ACACAGAAAGAAGTGCAAACATTAGGGTTATCCAATCTTGTTGGCACATCATTATTACGA
GCATACATGCACGGTTACTTCATTGATATTCGACTTTACCATAAAGCAATGGCTGTTGCG
AACCCGTTCGCTTACAAGGAGTATCGAAAACGAAAAATAGAAGAAAGGGTTGAAGAGGCA
AGAGCTAACAGAGTTCATGTTAAGAAACTTCCAAAAGTAAATCGCCACCTAGCGGACAGA
TTGATGACACGAGCAGCTGATGAAGAATTAAAGAGTGGAAAGAAGAAAAAAATGAAGAGG
GAAGCAGCGAACCTTCTTGATGATCCTCGCTTCAAATCCATGTTTGAGGATCCAAACTTC
CAAGTTGACGAAGAATCCGAAGAATTCAAGCTCCTCAATCCTGTCGTTTCAAAACAATTC
GAGAAAACAAAAGCTAAGGAAGAAAAACTTGCTCAGTTTCCCAAAATACAGGAGGATAGT
GATGGTGATCACGGGAGTCATGATGAGAGTGATGACTTTGCATCATCTGATGAGGAAGAT
AAAAAATGGGTGAAAGAGGCGAAAAAGTCCAAGCAAAAGAGTAAATCTGCTCCTCAGCGA
CCTCTTGTGGACAAGCAGCAGCAAAAGAAAATGAGTAAACCACAAATCTTCCACCTCAAA
GATGACGTTGATCCAGGAAAACCTTTCACTCTCCAAGATCTTGATAAATTGGGATGTGAG
GAAGCGAACCAGAAACGTGAAGCCAAAAAAAGTGCAACGCTTGAGGAGCGAGTGAGAGAA
AGTGAGAAAAAAGGAGGAATCTCTCGTCTCGTACATTCTGACCTCACTTCCGGTGGAAAG
CAAGCGACTTTCCGCATGAACAAAGTAACCAAGGAATCGGTTCGTAAAGATCTAGAAAAG
GAACACAGAGACGAACGTAGAAGGATACGAAGACCAGCCTCAAAACTAAAAACAGCAAAA
CGGAAAAATTCGTTTTTTAAATGAAATTCCGTTCCTGGCAATTCAGAGGCTGTGAGCAAT
ACGTGACCACTTAAAGATCCGGATAAATCTGGTTCCATCCGGTTTACCAACTAACTGCTA
CGTGGTTCGTCGAGATCTCGTCTTATTTTTTCTCTAATAAAAAACTCTACCAGCTATTTA
GGTCAACAGGATAGCTATGGAAACAAATTTGACTTCGAATAACATAATTTACGTCTGTAT
TTGTTTGCAGAAAGCGGCAGTTTCGTATTATTCCCCACGAACTGTTCAATTGTGGGGTCA
TCGCCACGAGAATTGCTGCTTTATTTATTTGTACCACAATTAAGTTCGTCGTGGGGTGAC
CGTCACCAGCTCAGTTTGACTTGTAAAGCACTCCTAGAACATCACGTTGCATTAGCACTA
CAGTTAGTTGCGTAAAAGATTTAGGTCTTCACTGCTTCGTCATTCTGCAACTTATTAATA
GAGTTTTAATGAAAAAGGGTCGTTTTGTGCGAGCGTTAAAAACACTATATCATAGTTGGT
AACCTATATATTCACATACGTAGAAATGGTTTTGAGCTGAAGTTTATGGTCGAGCACTTA
TAGATCAGCTCGCATATGTCTTGAGAGTATTTAGGAAAAAAATTAATACGTTTGTATTTG
AAAACTTGATATATGGCAGTTTCTCTTTTCAGTGATTTCCTTTTTATTTTGAAAAACAGC
CGAAGTGTCG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[35-231] 5.8E-14 - T[234-384] 2.6E-9 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[41-339] 1.54E-32 |
| SMART |
WD40_repeat (IPR001680) - T[45-84] 110.0 - T[168-207] 0.016 - T[216-259] 240.0 - T[261-301] 0.51 |
| Pfam |
WD40_repeat (IPR001680) - T[172-207] 0.079 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[175-310] 11.155 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[175-216] 9.472 |
| Pfam |
NUC153 (IPR012580) - T[486-513] 3.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NOL10_HUMAN | 50.986 % | 698 | 0 |