- Transcript 'KH2012:KH.C11.160.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.160.v1.A.SL2-1
Possible name(s)
GJC1; GJC2; GJD3
Gene model
Location
KhC11 [4,828,279 / 4,831,103]
Amino acid sequence
Length: 441
>KH.C11.160.v1.A.SL2-1
EMAWHIIHSLLEQVRLHSTFPGKLWIIMMFIFRIVVVARIGDMVYHDEQSHFVCNTLSPG
CSNVCFNAFSPISQLRFWSLMVLVVSSPGVLFCIYASHKIYHAYVKFPLAEEEGAPKSRT
WDTASEIDRGSEYGRPIANGKRRKGDSPPAFTAHPTAPPLYVVKRLNSKNNEKLDKNGKP
EISRRVKSGNYDAPVRKRHRRHGNDEEKDLMEKRKGSTTDNNYTSNDDVRIGRKWRYVDH
PSRQQTYPIYSDSRGRKVEYISVGGKPNYYDEIKANKQNKIMLENPQLYRAYWWHVVIRT
VLEIGFLVGQYYLYGWFVPELFECKRWPCPKTVDCFVSRPMEKTCLLWLMFGLGAIACVL
SIGEFWALGWERFKYACCCRGHKMTYEEKRRRLALLQASSAHPPKQPEGNKDEIIVMHGG
GGMTGALSLDSLSSDTTVESV
Nucleotide sequence
Length: 1,470
>KH2012:KH.C11.160.v1.A.SL2-1
ATATAGTATTTACTCAACTATAGGCACCAATCGTTGTGAGAAATGGCGTGGCATATTATC
CACAGTTTGCTTGAACAAGTTCGACTTCATTCTACTTTCCCAGGGAAGCTATGGATTATA
ATGATGTTCATATTCCGTATCGTGGTTGTGGCAAGGATAGGAGATATGGTCTATCACGAT
GAACAGTCCCACTTCGTTTGCAACACGTTATCACCCGGTTGTTCGAACGTTTGTTTCAAC
GCATTTAGCCCGATATCTCAACTACGTTTCTGGTCATTGATGGTTTTGGTCGTATCTTCA
CCAGGGGTTTTATTCTGCATCTACGCAAGCCACAAGATATACCACGCTTATGTTAAGTTC
CCCCTCGCCGAGGAAGAAGGAGCGCCCAAGAGTCGCACTTGGGACACGGCTTCGGAAATT
GACCGCGGGTCTGAATACGGTCGTCCAATCGCGAACGGAAAAAGGAGGAAAGGCGATTCT
CCCCCTGCGTTCACCGCCCACCCCACCGCCCCACCTCTTTACGTTGTTAAGCGCCTAAAC
TCGAAAAATAATGAAAAACTTGACAAGAACGGAAAACCCGAAATTTCTCGCCGCGTCAAG
AGCGGGAACTATGACGCACCCGTTCGAAAACGTCACCGTCGTCATGGCAACGACGAAGAG
AAAGATTTGATGGAGAAACGAAAGGGATCAACGACTGACAACAACTATACGTCTAATGAT
GACGTCAGAATAGGAAGAAAATGGCGCTACGTTGATCACCCTTCCCGGCAACAAACGTAC
CCGATATATTCGGACAGCAGAGGGCGCAAGGTGGAGTACATATCGGTGGGGGGAAAACCC
AACTATTATGACGAAATAAAAGCGAACAAACAAAACAAGATAATGTTGGAGAACCCGCAG
CTTTATAGAGCGTATTGGTGGCACGTGGTCATTCGAACTGTCCTAGAGATTGGGTTCTTG
GTTGGTCAGTATTATTTGTACGGTTGGTTCGTACCTGAATTGTTTGAATGCAAGAGATGG
CCTTGCCCCAAAACCGTGGATTGCTTCGTGTCAAGGCCGATGGAGAAAACTTGTCTTTTG
TGGCTCATGTTTGGTTTGGGTGCCATTGCTTGTGTGTTAAGCATTGGGGAGTTCTGGGCA
CTTGGTTGGGAAAGGTTCAAGTATGCTTGCTGTTGCCGTGGACACAAGATGACGTATGAA
GAGAAGAGACGACGACTCGCCTTGCTACAAGCGTCCTCTGCCCACCCACCAAAACAACCG
GAGGGAAACAAGGATGAGATCATAGTGATGCATGGCGGTGGTGGAATGACCGGAGCTCTC
AGCCTGGACAGTCTAAGCAGCGACACGACCGTTGAGAGCGTGTGACGTCACTGATGACGT
CATAGGAAGAACCCATCGCGTAGCCACGTAGACGGATGCAAGGCGTTCGAAGCTTNAATA
GGCCNAGCCTCTTATATTACTANCANCTCT
| Gene3D |
Connexin_N_sf (IPR038359) - T[2-136] 8.2E-38 - T[244-378] 6.6E-33 |
| PANTHER |
Connexin (IPR000500) - T[2-382] 1.7E-115 |
| Pfam |
Connexin_N (IPR013092) - T[4-370] 1.7E-79 |
| PRINTS |
Connexin (IPR000500) - T[21-45] 1.6E-17 - T[52-74] 1.6E-17 - T[77-97] 1.6E-17 |
| SMART |
Connexin_N (IPR013092) - T[43-76] 1.4E-11 |
| SMART |
Connexin_CCC (IPR019570) - T[302-368] 4.6E-36 |
| ProSitePatterns |
Connexin_CS (IPR017990) - T[324-340] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CXG1_HUMAN | 49.495 % | 123 | 2.51E-31 |
| CXG2_HUMAN | 46.078 % | 120 | 5.26E-30 |
| CXD3_HUMAN | 46.875 % | 108 | 8.14E-27 |