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TRANSCRIPT CARD

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  1. Clone 'cima823495'
  2. Transcript 'Haaura.CG.MTP2014.S5...'
  3. Transcript 'Phfumi.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.C1.296.v1....'
  5. Transcript 'KH2012:KH.C11.119.v5...'

Transcript Model

Transcript Id

KH2012:KH.C11.119.v5.B.SL3-3

Possible name(s)

BRD2; BRD4; CECR2

Location

KhC11 [3,113,339 / 3,119,552]

Sequences

Amino acid sequence

Length: 917

>KH.C11.119.v5.B.SL3-3
KTKSTVSTENKIKQKLQSETSASPHPDISDHEYAVMQKRPMDLSTIEDKLKQQKYSSVKD
FKEDITLMFNNCRLYNGPDSAKKMRLASKSKDLSKGKESKGRGRGRSLSRSSLKESSAPT
PPKPKNIRKKPPPKRKLRGATTKWTTKDESDNSDHDAESDSGNSDARNNGNVEKEAATRG
RGKYRRASKTKLRSKNHDSDSSEPSSVSVNGKKVVPEVETAVESNDRLTGNENVASPLKS
PLSKDSDKNSELNVKSSSADPSEKITESNPADVDSSSSSSRGSSRSQSLEKFEKLEEDAK
SKPQVMWSLDYLASQARVLEEQCKKTESSSAPPATGYSHHVPAVPTTIPGGRTTQQNHRP
PLEDRSRSQTERDNPYLARKASQDVYQDAKMSSSPNQITRRPSLPAQSEKHNTCPIPAVV
HANNNTHKITPNQTSNEPNHPSMSYKHPTSVNQTVDINNRRHSLSNYSQPDNSPTIHTKP
YNKSPPDCPATQPEKKSYSQPPQYSSSNTMSAQQGGQKVGATSQKSYPINTPTNTRASHE
PQHPPPPKQPTKQHSQNPPTPDNSVRLQKPPSKNDTQQGRMQSYEQATPAMHRSSQYHDQ
QNFYPQEKQVSAERSGGGYYRNSASHYQEDNHAVAAAATMLFQNPTMANLGLPPWSLSQT
QTSHNRSQPSSTSTTAKSSAMTGASHHESGNHRQPHHSTQICQSSSVSTSSHAQSNRHSS
NAHRMSNKSRHQSTTSDTVGSTAANTVKYRATTAHTNNNHCPPASVATASQSGSNTTRHD
TATNEHFQQHKSYGDYRSYRIPPTPAPTPLSRESHTPGYSPQQHNGLLSATAGPTNNTSL
LHQDLTASATLRALQQQHKGDRPSPHAAASMLHYAAAVQQSQGAVAAANEQYNRLAASGN
NLCENTGSVAQWRHHCK

Nucleotide sequence

Length: 2,755

>KH2012:KH.C11.119.v5.B.SL3-3
AAAAACCAAATCTACAGTTTCTACTGAAAACAAAATTAAACAAAAGCTTCAAAGTGAAAC
TTCTGCCAGTCCTCATCCAGATATAAGTGACCATGAGTATGCTGTTATGCAAAAGAGGCC
AATGGATCTGTCCACAATTGAAGATAAACTAAAGCAGCAGAAATACAGCTCAGTTAAAGA
TTTCAAAGAAGACATCACTCTCATGTTTAACAATTGTCGGCTTTACAATGGCCCCGACAG
TGCAAAGAAGATGCGACTCGCATCCAAATCCAAGGATTTATCGAAAGGAAAAGAGAGCAA
GGGAAGAGGAAGAGGGAGATCACTGTCGAGAAGTTCTCTCAAAGAGTCCTCTGCTCCTAC
TCCTCCTAAACCAAAGAACATCCGAAAGAAACCACCTCCGAAGAGAAAGCTGAGAGGAGC
AACTACGAAGTGGACGACCAAGGATGAGAGTGATAACTCCGATCATGATGCGGAGAGTGA
CTCTGGAAACTCGGATGCGAGGAACAATGGGAATGTGGAGAAGGAAGCAGCTACGAGGGG
AAGGGGGAAGTACAGAAGAGCGTCAAAGACCAAACTCCGCTCAAAAAATCATGATTCCGA
TTCTTCTGAACCAAGTTCTGTTTCTGTTAATGGAAAAAAAGTTGTACCGGAAGTGGAAAC
AGCAGTTGAAAGCAATGATAGACTTACTGGTAATGAGAACGTTGCTTCACCTCTTAAATC
CCCATTGAGTAAAGATTCAGATAAAAATTCGGAGTTAAATGTGAAGTCCTCTTCCGCTGA
CCCCTCAGAGAAGATTACTGAGTCAAATCCTGCAGATGTTGATTCTTCTTCCTCATCTTC
AAGAGGTTCCTCTCGATCTCAATCTCTAGAGAAGTTTGAAAAATTGGAAGAAGATGCCAA
ATCTAAACCTCAAGTGATGTGGTCACTTGATTACTTAGCGTCCCAGGCTCGTGTGCTGGA
AGAACAATGCAAAAAAACTGAGTCCAGTTCAGCACCCCCTGCAACTGGTTATTCCCACCA
TGTACCAGCGGTACCTACAACCATACCAGGTGGCCGTACAACACAGCAAAACCACCGGCC
ACCTTTGGAAGACCGATCACGGTCCCAAACAGAGCGCGACAACCCCTACTTAGCGAGAAA
GGCATCTCAGGACGTTTACCAAGATGCAAAGATGTCTTCATCACCAAACCAAATTACTCG
CCGGCCAAGTTTACCCGCTCAATCGGAGAAGCATAACACATGCCCAATTCCTGCAGTAGT
TCATGCAAACAACAATACCCATAAAATTACTCCAAACCAAACCTCAAACGAACCAAATCA
TCCGTCCATGTCATATAAACACCCAACGAGTGTGAACCAAACTGTTGACATAAACAATCG
ACGGCATTCGTTATCAAACTACTCACAGCCTGATAATAGTCCAACAATTCACACTAAACC
TTACAATAAATCCCCTCCCGACTGCCCTGCCACTCAACCCGAGAAAAAATCCTATTCTCA
ACCCCCCCAATACTCTAGCAGTAACACCATGTCCGCACAACAGGGGGGTCAGAAAGTCGG
GGCTACGAGCCAAAAATCGTACCCCATAAACACCCCTACAAACACCCGTGCCTCCCATGA
GCCCCAACACCCCCCACCCCCTAAACAACCCACAAAACAACACTCCCAAAACCCCCCAAC
CCCAGATAACAGTGTAAGATTGCAAAAACCGCCGTCGAAAAATGACACCCAACAGGGTAG
AATGCAATCTTATGAACAAGCCACCCCTGCCATGCACAGATCCAGTCAATATCATGATCA
ACAGAACTTCTACCCTCAAGAAAAACAAGTCTCTGCTGAGAGATCTGGTGGTGGCTACTA
TAGAAACTCAGCTAGTCACTACCAAGAAGACAACCACGCTGTAGCAGCCGCAGCAACCAT
GTTGTTTCAAAACCCCACCATGGCAAACCTGGGGCTTCCACCTTGGTCATTATCTCAAAC
ACAAACCAGTCATAACCGGTCTCAACCGAGCTCTACCAGCACCACTGCCAAGTCAAGTGC
CATGACAGGTGCCTCCCACCATGAGAGTGGTAACCACCGGCAACCGCATCACTCCACACA
GATCTGTCAATCTTCCTCCGTTTCCACCTCAAGTCACGCACAGTCCAATCGTCATTCATC
TAACGCTCACCGAATGAGCAACAAGTCACGGCACCAGTCCACGACCTCCGACACCGTTGG
CTCCACGGCTGCTAACACTGTCAAGTACCGTGCCACCACTGCCCACACCAATAATAACCA
CTGTCCACCAGCAAGCGTGGCAACTGCCAGTCAATCTGGTTCAAATACAACTAGACATGA
TACAGCTACAAATGAACATTTCCAGCAGCATAAGAGTTATGGGGACTACAGAAGTTACCG
TATTCCCCCAACTCCCGCACCCACCCCACTGAGTCGTGAATCCCACACCCCTGGCTACTC
TCCTCAGCAACATAATGGCTTGCTCTCAGCTACTGCAGGGCCCACCAACAACACCTCCCT
GCTACACCAGGATCTCACAGCTTCTGCTACATTAAGAGCGTTGCAACAACAACATAAAGG
TGACCGTCCTTCCCCACACGCAGCGGCAAGCATGTTACATTACGCAGCTGCAGTACAACA
GTCTCAAGGTGCCGTTGCCGCTGCCAACGAACAATATAATCGTCTTGCTGCATCAGGTAA
TAACTTATGTGAAAATACAGGCTCCGTTGCTCAGTGGCGCCATCATTGTAAGTAA

InterProScan

SMART
Bromodomain (IPR001487) - T[1-97] 1.3E-4
Gene3D
Bromodomain-like_sf (IPR036427) - T[5-102] 6.8E-20
Pfam
Bromodomain (IPR001487) - T[11-80] 3.1E-17
PRINTS
Bromodomain (IPR001487) - T[30-46] 1.4E-9 - T[46-64] 1.4E-9 - T[64-83] 1.4E-9
SUPERFAMILY
Bromodomain-like_sf (IPR036427) - T[31-80] 3.66E-18
ProSiteProfiles
Bromodomain (IPR001487) - T[32-83] 15.01

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value