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TRANSCRIPT CARD

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  1. Clone 'cima815828' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Clone 'cien141007' > 
  4. Transcript 'KH2012:KH.C1.1116.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1116.v1.A.SL1-1

Possible name(s)

HAND1; HAND2; SCX

Gene model

KH2012:KH.C1.1116

Location

KhC1 [7,464,419 / 7,466,215]

Sequences

Amino acid sequence

Length: 299

>KH.C1.1116.v1.A.SL1-1
LNMTTVVMRTMTQDDSNPTPSYNEQHQCWNVADSQFGEVFNERPRFECFATENPHMVAGP
NLQHWEGSGGSYYDQDSPGSSVEEPYESSRPSHPYYHFEPQPNYMEANGFTLLQQYVSNV
SHTEQQEEPSYQTRVRTNLRKRERNLNINKAFDDLRDRIPNLPSDTKISKIKVLRLASDY
IRHLSKVLVKKTPSQEYETDNHDQFNEEISTKRKCDFEIDPDVIAVKRRKTDWSRINDEI
ARHQSVNQIKTNDENEHLAPYFHQADQNNLTTPPLAGELDTFFPSTEYFTNFEHRNESY

Nucleotide sequence

Length: 1,125

>KH2012:KH.C1.1116.v1.A.SL1-1
CAACACAGTAGCTTAACATGACAACAGTAGTTATGCGCACGATGACGCAAGATGACTCGA
ACCCGACACCTTCGTACAACGAGCAACATCAATGCTGGAACGTGGCGGATTCACAATTCG
GTGAAGTTTTCAATGAAAGACCGCGCTTTGAATGCTTTGCAACCGAAAACCCACACATGG
TAGCAGGGCCTAACTTACAACATTGGGAGGGTAGCGGGGGTTCTTATTACGACCAAGACT
CTCCGGGGTCGTCGGTTGAAGAGCCGTATGAGTCGTCGCGTCCGAGTCACCCGTATTATC
ACTTCGAACCTCAACCGAATTACATGGAAGCAAATGGGTTTACTTTACTCCAGCAATATG
TGTCTAACGTTAGCCATACAGAGCAGCAAGAAGAACCAAGTTATCAAACAAGGGTTCGAA
CAAACCTCAGGAAAAGAGAAAGGAATTTAAACATCAACAAAGCATTCGACGATCTGCGCG
ATAGAATTCCAAATCTTCCATCTGATACGAAAATATCGAAGATCAAAGTTTTGAGACTGG
CTTCAGATTACATAAGACATCTTAGTAAAGTTTTGGTGAAGAAAACCCCGTCACAGGAAT
ATGAAACTGATAATCATGATCAATTTAACGAGGAAATTTCAACGAAACGTAAATGTGACT
TCGAGATAGATCCTGACGTCATTGCAGTCAAGAGAAGAAAAACTGACTGGAGTAGAATTA
ACGATGAAATTGCACGCCACCAATCTGTCAATCAAATCAAGACCAACGACGAAAATGAAC
ATTTAGCCCCCTACTTCCACCAAGCGGATCAAAATAACCTAACTACACCACCGCTAGCTG
GAGAGCTTGATACATTCTTTCCTTCAACAGAATATTTCACAAATTTTGAACATCGCAACG
AAAGTTATTAAGAGTGTTTTAAAACAAAAATAAACTTTTTTGTTTTAAGTTTAAATTTTC
AAGTTTTCACCATTGCCGTGTACCCGCTATAGCATTACTAGCGCCGCATATACTGTCAGT
ACCTTGTGTTTCTTCAATTAAACTTGCGCGGAACATATGTTTACATTGTCAGCCGAATGT
TTTCCTGTATTTTGTTTTAACCCTTGTCAAATACATTTTTTACAC

InterProScan

Gene3D
HLH_DNA-bd_sf (IPR036638) - T[130-195] 3.6E-19
SUPERFAMILY
HLH_DNA-bd_sf (IPR036638) - T[131-190] 7.07E-15
CDD
bHLH_dom (IPR011598) - T[132-188] 1.83002E-14
ProSiteProfiles
bHLH_dom (IPR011598) - T[132-184] 14.608
Pfam
bHLH_dom (IPR011598) - T[134-184] 2.3E-11
SMART
bHLH_dom (IPR011598) - T[138-190] 3.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value