- Transcript 'Cisavi.CG.ENS81.R156...' >
- Transcript 'KH2012:KH.C1.1077.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1077.v2.A.nonSL3-1
Possible name(s)
CALU; RCN2; SDF4
Gene model
Location
KhC1 [3,781,484 / 3,786,576]
Amino acid sequence
Length: 383
>KH.C1.1077.v2.A.nonSL3-1
KKYIVLAMYAVKVLFYVLLISFYLEICHCKSILMVKEKKKAKEDGDENQVDVIPVDGEHN
ANRLPDVEIAPPKHLDAMKFGRDGNLNSNYHKEVFLGEEVKKFENGEYELKEQKNQLIKM
FKLIDENGDGSLDEAELSKWVLHKTKEHFSEAKQENEQKFKELDTDNDGNVTWNEYLTEF
LSRKNYSRVEVAEKLRNKVKIEVDAKVRDEVDDVHDKWLQATSLKIMQNHQNASNDGDSN
MSVSEFLDFQHPETGREMLEYLVQDFLHDMDVDGDEVLTIQEYISVGSDVDVDTQDDDWA
KERRNEFRNVIDQNKDGKVTKEELKRYLDPMSEAMAQQEARQLIGFGDENFDMKLSLKEL
LENSEYYTGSKLYNYARSVHDDL
Nucleotide sequence
Length: 1,601
>KH2012:KH.C1.1077.v2.A.nonSL3-1
AAGAAATATATTGTACTCGCAATGTATGCAGTAAAAGTGCTTTTTTATGTTCTTCTTATT
TCATTTTATTTGGAAATATGTCACTGCAAGTCAATTTTAATGGTGAAAGAAAAAAAGAAA
GCCAAAGAAGATGGCGATGAAAATCAAGTGGATGTTATACCAGTTGACGGAGAGCACAAT
GCAAATAGGTTGCCAGATGTTGAAATTGCTCCACCAAAGCATTTAGACGCAATGAAATTT
GGACGAGATGGGAACTTAAACTCAAACTACCATAAAGAAGTCTTTTTGGGGGAAGAAGTG
AAAAAGTTTGAAAATGGCGAATATGAGTTGAAAGAACAGAAGAACCAATTAATAAAAATG
TTTAAGCTAATTGATGAAAATGGCGATGGTAGTCTTGATGAAGCTGAACTATCAAAGTGG
GTACTGCACAAAACAAAAGAACATTTTAGTGAAGCAAAACAAGAGAATGAGCAAAAGTTT
AAGGAGCTAGATACAGATAATGATGGAAACGTTACATGGAATGAATACCTCACAGAGTTT
CTTAGCAGAAAAAATTACAGCAGGGTTGAAGTTGCTGAGAAACTACGAAACAAAGTGAAG
ATTGAAGTTGATGCAAAAGTCCGGGATGAAGTGGATGATGTTCACGACAAGTGGTTACAG
GCAACTTCATTAAAAATAATGCAAAATCATCAGAATGCATCGAACGATGGGGATTCAAAC
ATGAGTGTGAGTGAATTTCTAGATTTTCAACATCCAGAAACAGGAAGGGAGATGCTTGAA
TATCTTGTGCAGGACTTTCTACACGACATGGACGTCGATGGTGATGAAGTGTTGACGATC
CAGGAATACATCTCTGTTGGATCAGATGTTGATGTTGATACACAGGATGATGATTGGGCA
AAAGAAAGAAGGAATGAGTTCAGGAATGTCATTGATCAAAATAAAGATGGGAAAGTTACA
AAAGAAGAACTAAAAAGATACCTTGATCCAATGAGTGAAGCAATGGCTCAACAAGAAGCT
AGGCAGTTGATTGGTTTTGGTGACGAAAACTTTGATATGAAACTGTCACTTAAAGAATTG
CTTGAAAATAGTGAATACTACACTGGAAGTAAACTGTACAATTATGCACGTAGTGTTCAT
GATGACCTGTGACGTTCTTATTTAAAGTACATTGTGTTTTAAAGCATTTCTTTAAACTGG
CACATACTCTTATTATGAAGTAAAGCTTATAAACTTCACATTTCTCTTTACTGTCCATGT
GATATCCTATCTGTATTTACTTTCCTGAAGTGAGGTTTTTTAACATGTGTAAAAGTTTTT
GAGAGCTTAATTGGATACATATTTTTGCAATATATTTCTTTTTTTAATAAAAAGTTGTAT
TTTTAGTGCAGTAAACATACCAATATTTTTACTTTAAGCTTTCTGTATACTGAAGGAGCA
GTAACCGTCGTTATAATGCAATATTACTGTGCTTCTTGTATTTCTTTGATGCCATTAGAA
TGTATTTTTAATTCAGATTAATATGTATGTTGAAATATATTTTTAGTTCAGATTTATATG
CATGTATGTAGAAAATAGTAATACATTGCCTGTATATTTTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[111-284] 2.23E-16 - T[234-377] 2.02E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[112-147] 12.589 - T[151-186] 9.66 - T[263-293] 6.563 - T[309-334] 9.492 |
| Pfam |
EF_hand_dom (IPR002048) - T[115-178] 4.3E-11 - T[310-326] 1.4E-4 |
| SMART |
EF_hand_dom (IPR002048) - T[116-144] 0.05 - T[155-184] 59.0 - T[262-290] 11.0 - T[306-331] 9.6 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[125-137] . - T[164-176] . - T[312-324] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RCN3_HUMAN | 27.597 % | 101 | 2.42E-24 |
| CAB45_HUMAN | 40 % | 244 | 5.7E-78 |
| RCN2_HUMAN | 31.229 % | 131 | 3.42E-35 |