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- Transcript 'KH2012:KH.C1.1077.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1077.v1.A.nonSL2-1
Possible name(s)
CALU; RCN2; SDF4
Gene model
Location
KhC1 [3,781,481 / 3,786,576]
Amino acid sequence
Length: 372
>KH.C1.1077.v1.A.nonSL2-1
SKKYIVLAMYAVKVLFYVLLISFYLEICHCKSILMVKEKKKAKEDGDENQVDVIPVDGEH
NANRLPDVEIAPPKHLDAMKFGRDGNLNSNYHKEVFLGEEVKKFENGEYELKEQKNQLIK
MFKLIDENGDGSLDEAELSKWVLHKTKEHFSEAKQENEQKFKELDTDNDGNVTWNEYLTE
FLSRKNYSRVEVAEKLRNKVKIEVDAKVRDEVDDVHDKWLQASNDGDSNMSVSEFLDFQH
PETGREMLEYLVQDFLHDMDVDGDEVLTIQEYISVGSDVDVDTQDDDWAKERRNEFRNVI
DQNKDGKVTKEELKRYLDPMSEAMAQQEARQLIGFGDENFDMKLSLKELLENSEYYTGSK
LYNYARSVHDDL
Nucleotide sequence
Length: 1,568
>KH2012:KH.C1.1077.v1.A.nonSL2-1
AGTAAGAAATATATTGTACTCGCAATGTATGCAGTAAAAGTGCTTTTTTATGTTCTTCTT
ATTTCATTTTATTTGGAAATATGTCACTGCAAGTCAATTTTAATGGTGAAAGAAAAAAAG
AAAGCCAAAGAAGATGGCGATGAAAATCAAGTGGATGTTATACCAGTTGACGGAGAGCAC
AATGCAAATAGGTTGCCAGATGTTGAAATTGCTCCACCAAAGCATTTAGACGCAATGAAA
TTTGGACGAGATGGGAACTTAAACTCAAACTACCATAAAGAAGTCTTTTTGGGGGAAGAA
GTGAAAAAGTTTGAAAATGGCGAATATGAGTTGAAAGAACAGAAGAACCAATTAATAAAA
ATGTTTAAGCTAATTGATGAAAATGGCGATGGTAGTCTTGATGAAGCTGAACTATCAAAG
TGGGTACTGCACAAAACAAAAGAACATTTTAGTGAAGCAAAACAAGAGAATGAGCAAAAG
TTTAAGGAGCTAGATACAGATAATGATGGAAACGTTACATGGAATGAATACCTCACAGAG
TTTCTTAGCAGAAAAAATTACAGCAGGGTTGAAGTTGCTGAGAAACTACGAAACAAAGTG
AAGATTGAAGTTGATGCAAAAGTCCGGGATGAAGTGGATGATGTTCACGACAAGTGGTTA
CAGGCATCGAACGATGGGGATTCAAACATGAGTGTGAGTGAATTTCTAGATTTTCAACAT
CCAGAAACAGGAAGGGAGATGCTTGAATATCTTGTGCAGGACTTTCTACACGACATGGAC
GTCGATGGTGATGAAGTGTTGACGATCCAGGAATACATCTCTGTTGGATCAGATGTTGAT
GTTGATACACAGGATGATGATTGGGCAAAAGAAAGAAGGAATGAGTTCAGGAATGTCATT
GATCAAAATAAAGATGGGAAAGTTACAAAAGAAGAACTAAAAAGATACCTTGATCCAATG
AGTGAAGCAATGGCTCAACAAGAAGCTAGGCAGTTGATTGGTTTTGGTGACGAAAACTTT
GATATGAAACTGTCACTTAAAGAATTGCTTGAAAATAGTGAATACTACACTGGAAGTAAA
CTGTACAATTATGCACGTAGTGTTCATGATGACCTGTGACGTTCTTATTTAAAGTACATT
GTGTTTTAAAGCATTTCTTTAAACTGGCACATACTCTTATTATGAAGTAAAGCTTATAAA
CTTCACATTTCTCTTTACTGTCCATGTGATATCCTATCTGTATTTACTTTCCTGAAGTGA
GGTTTTTTAACATGTGTAAAAGTTTTTGAGAGCTTAATTGGATACATATTTTTGCAATAT
ATTTCTTTTTTTAATAAAAAGTTGTATTTTTAGTGCAGTAAACATACCAATATTTTTACT
TTAAGCTTTCTGTATACTGAAGGAGCAGTAACCGTCGTTATAATGCAATATTACTGTGCT
TCTTGTATTTCTTTGATGCCATTAGAATGTATTTTTAATTCAGATTAATATGTATGTTGA
AATATATTTTTAGTTCAGATTTATATGCATGTATGTAGAAAATAGTAATACATTGCCTGT
ATATTTTA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[111-179] 3.87E-14 - T[211-366] 1.06E-19 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[113-148] 12.589 - T[152-187] 9.66 - T[210-245] 5.475 - T[252-282] 6.563 - T[298-323] 9.492 |
| Pfam |
EF_hand_dom (IPR002048) - T[116-179] 4.1E-11 - T[299-315] 1.3E-4 |
| SMART |
EF_hand_dom (IPR002048) - T[117-145] 0.05 - T[156-185] 59.0 - T[251-279] 11.0 - T[295-320] 9.6 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[126-138] . - T[165-177] . - T[301-313] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RCN3_HUMAN | 28.716 % | 105 | 6.24E-26 |
| CAB45_HUMAN | 41.424 % | 248 | 7.36E-80 |
| RCN2_HUMAN | 31.293 % | 125 | 4.8E-33 |