- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Molecular Tool 'cilv08p18-MO (Hamada's MO)' >
- Transcript 'KH2012:KH.C1.1067.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1067.v1.A.SL1-1
Possible name(s)
HPCA; HPCAL1; NCS1
Gene model
Location
KhC1 [1,035,607 / 1,043,555]
Amino acid sequence
Length: 220
>KH.C1.1067.v1.A.SL1-1
VFFFTDLLRFVSFTSGRRNSTRSNKMGKSGSKLSAEDAQTLQTTTHFDKKEIQKWYRDFM
KDCPNGYLKKEEFQKVYQQFFPKGNPSKFANFVFNVFDSDKDGFITFKEFISALSVTSRG
NLDEKLDWAFNLYDLDHDGFITREEMLNIVDAIYSMVGNAMDLPEDENTPEKRVNKIFCQ
MDQNKDGKLTKDEFREGSKCDPYIVKALSAGLGGAESCPS
Nucleotide sequence
Length: 1,030
>KH2012:KH.C1.1067.v1.A.SL1-1
GTGATCTTTGTAGGTCTTCTTTTTTACAGACCTCTTACGCTTTGTGAGTTTTACTTCAGG
CAGAAGAAACTCAACAAGGAGTAACAAAATGGGAAAGAGCGGCAGCAAACTGAGCGCAGA
GGACGCGCAGACGTTGCAGACCACAACTCACTTTGACAAGAAAGAAATACAGAAATGGTA
TCGAGACTTTATGAAGGATTGTCCCAACGGTTACTTGAAGAAGGAGGAATTTCAAAAGGT
TTACCAGCAGTTCTTTCCCAAAGGAAATCCGTCAAAATTTGCAAATTTCGTTTTTAACGT
TTTCGACTCTGACAAGGACGGCTTCATTACGTTCAAAGAATTTATTTCTGCCCTTTCCGT
GACGTCACGAGGAAACCTGGACGAAAAGTTAGATTGGGCTTTCAATCTTTACGATCTTGA
TCATGACGGTTTTATTACAAGAGAAGAGATGTTAAACATAGTAGATGCCATCTACTCCAT
GGTGGGAAACGCTATGGACTTGCCGGAGGATGAGAACACACCTGAGAAGAGGGTTAACAA
AATATTCTGTCAGATGGACCAGAACAAGGATGGCAAATTGACGAAAGATGAATTCCGAGA
AGGCTCGAAATGCGATCCCTATATCGTGAAGGCGTTGTCTGCTGGACTAGGAGGGGCGGA
AAGCTGCCCGTCGTGAATTGATTTTAGAAAGTTTGCCAATGTAATTAAGCATGTTACCCA
AACAGAACCGATGTACTATTATTTTATCAGACAGAACTTGTTATTCATTTTTTTGCCATT
GTACCCGGTAAACTTTATTTTGTGTTTTAACAAGCCTAATAATCTTACCACGCGCAGTGT
TGATTTTAAATTTAAGTTTTACACTTGCCGTCTCAGTGGTCAAATTAAACAGGCTGTATG
AGATGTAACTCCCAACACAATACCACTAGAACATTACATAATGCTGTATACATTTCTGGT
GCTTTTTATCGTTTTACCCTCTGGTGTTCTTGGTATGAAAGAATTAAACAGTTGCCTAAA
CACACGAAAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[26-208] 1.17E-51 |
| Pfam |
EF_hand_dom (IPR002048) - T[65-113] 2.7E-7 - T[124-196] 3.6E-15 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[65-83] 5.42 - T[85-120] 13.342 - T[121-156] 13.704 - T[169-204] 11.612 |
| SMART |
EF_hand_dom (IPR002048) - T[89-117] 0.0038 - T[125-153] 1.2E-5 - T[173-201] 0.024 |
| CDD |
EF_hand_dom (IPR002048) - T[92-150] 1.44227E-15 - T[125-197] 5.49057E-14 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[98-110] . - T[134-146] . - T[182-194] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HPCA_HUMAN | 56.842 % | 225 | 2.03E-75 |
| NCALD_HUMAN | 57.923 % | 225 | 1.93E-75 |
| NCS1_HUMAN | 67.391 % | 261 | 1.03E-89 |