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  1. Transcript 'KH2012:KH.C1.1061.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1061.v1.A.ND1-1

Possible name(s)

KH.C1.1061

Gene model

KH2012:KH.C1.1061

Location

KhC1 [3,070,290 / 3,074,755]

Sequences

Amino acid sequence

Length: 351

>KH.C1.1061.v1.A.ND1-1
SFGTPTWPRYGRGLTSTHDGKAVAVCHLNEVCVYSLKGEVIQRFGNEYFSCCWGITCNND
GNYVITESKRGVVYVVDACGRVLREIGARNIEKNRKPSIKPTKQQPGQDPRTFTNQVKLS
APRYVATNYKNQIIVTDTGQKKPFVLNYDGKVCLEIGGSVAPGCQLCKGDISPSIQDHDV
TEASSEYSIFDQPLDASTEHIIPQKRGRLHRCFSYVIRKLTRKSRKRRDTVQNIADFTTP
IVKENTRSSYPREVLPSIQDSNDDEISFRTCEECGVVDPRGVCIDDQNNILIADKAQHRV
SLFTPKGEFMRHVLTYADDVFEPRILCVINHKTLAVADGTLKIKLFNFNAV

Nucleotide sequence

Length: 1,471

>KH2012:KH.C1.1061.v1.A.ND1-1
CTCGTTCGGAACACCAACATGGCCGAGATATGGTCGAGGGTTAACTTCAACTCATGATGG
AAAAGCAGTTGCTGTTTGTCATTTAAATGAAGTTTGTGTGTACAGTTTAAAAGGAGAAGT
TATACAAAGATTCGGGAACGAATATTTCTCTTGTTGTTGGGGAATAACATGCAATAACGA
CGGTAACTATGTCATTACGGAAAGTAAACGTGGTGTGGTTTACGTGGTCGACGCTTGCGG
TCGTGTTTTACGGGAAATCGGTGCAAGAAATATAGAGAAAAATCGAAAACCGAGTATTAA
ACCCACAAAACAGCAGCCAGGGCAAGATCCACGAACATTCACAAACCAAGTAAAGTTGTC
AGCACCACGTTACGTTGCGACGAATTATAAAAACCAGATCATTGTCACTGACACTGGACA
GAAGAAACCGTTCGTTCTGAATTACGATGGAAAAGTTTGTTTAGAAATAGGCGGTTCAGT
GGCTCCAGGCTGCCAGCTCTGTAAAGGAGATATATCTCCTTCAATTCAAGACCATGACGT
AACCGAAGCATCTTCTGAATATTCAATATTCGACCAACCGCTAGATGCCAGCACGGAGCA
TATAATACCGCAAAAACGTGGAAGGTTACACAGATGCTTTTCGTACGTGATTCGTAAACT
TACGCGAAAGTCAAGGAAAAGAAGGGATACGGTCCAAAACATAGCAGACTTTACTACACC
GATAGTAAAAGAGAACACTAGATCGTCATATCCCCGCGAAGTTTTACCTTCCATCCAGGA
CTCCAACGACGACGAAATAAGTTTCCGCACATGCGAAGAGTGCGGTGTGGTGGACCCGCG
TGGTGTTTGCATTGACGATCAGAACAACATCTTAATTGCCGACAAAGCGCAGCACAGAGT
ATCCCTATTTACACCGAAAGGCGAATTTATGCGCCATGTGCTGACATACGCAGACGACGT
ATTCGAACCTCGAATCTTATGCGTTATAAACCACAAAACGTTAGCTGTTGCCGACGGAAC
TTTAAAAATTAAACTGTTTAATTTTAATGCTGTGTAACATACGTTGCCAGGTGATTTGTG
ACCCAGTAAAACGCAAGTATTTTCTGACAGAAAGTCCCAAAATTCTAAAACTTAGGTATA
AAGAGAACCAGTATTATGGCAAAACACACACAGTAAAAAGTCCTGTACTACCTTGAATTG
TTTTATACACCTTCTGGAAATAACTGCCATACAATTTAAACATTTCTTGTCAACGACTAT
ACTTGCTTATCCACACATTAAGCCTATAGGTATAATACAATAACCTGTGAAACTATTTTG
TAAATTTGATTAAAAATTCAAACAGCCACAACATCAAAATACAATTTACAAAATATTTAC
GGTTTTGAAATTTTATCTTTTTTCTGTCTGCATTTCGTTTCTAATTTTTTTACTGTTTTC
TGCCAACATAATAAAAGACACGACAAGGTTA

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[1-171] 1.3E-18 - T[268-350] 4.1E-10
ProSiteProfiles
NHL_repeat_subgr (IPR013017) - T[38-79] 8.018 - T[119-149] 6.147 - T[279-306] 10.753 - T[323-349] 4.194
Pfam
NHL_repeat (IPR001258) - T[278-301] 3.2E-4

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value