- Transcript 'KH2012:KH.C1.1056.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1056.v1.A.ND1-1
Possible name(s)
GRB10; GRB14; GRB7
Gene model
Location
KhC1 [4,551,891 / 4,562,542]
Amino acid sequence
Length: 543
>KH.C1.1056.v1.A.ND1-1
DAAILHESSESIPSEDENHHSSKSSFFDKHFLKSLPVAILSRRKLFGSHSDLALSPTHGP
VRPPHSVPNNSTTNSNIHSHRKVDRISCKAQRINTKQMIWSVWVTDISSWKEVDLPHSST
AALLIHTLLTKLKRKIDLSSWSIIEQNSDSMIERYVEDYEIIDEIWKNQESDSISRFCLN
KTPSKYTILLSPDLCLPNGMLTFPGNSSEECPSTVRRLQMQHILTKTALELCGWLHVREV
GHRTWKKLYCVLRNSGLYYSNKTTSKEPQHLVSIAEVHSAQVWFPINNKKPTSSAPYPHC
FCLKPRKFKNGSIIRWFCVESTHTMSAWISGLRLTMNGSRFYESYLSARRQSQSNLVRSS
SDRTINRHDFAAMDFRGETGRVIHDPKEVAMLELEQQSSWRRRLINRTITGQASDRNIVG
SSAPTKQVAFFARAIHQTQTWFYGKITREEATEELHRNGNVDGLFLVRDSHTIPGGIVVT
LCHNQKSRHIPITQIERNGQNFYTADNGETRFVDMIQLVDFHRLNKGSLPCLLLHECSHS
QMS
Nucleotide sequence
Length: 2,118
>KH2012:KH.C1.1056.v1.A.ND1-1
AGATGCAGCAATCTTACATGAGAGCAGTGAATCCATTCCAAGTGAAGATGAAAATCATCA
TTCAAGCAAATCAAGTTTTTTTGACAAACATTTCCTTAAGTCTCTGCCGGTAGCAATATT
ATCTAGAAGAAAGTTATTTGGTTCACACTCTGATCTTGCCTTATCTCCAACTCATGGCCC
TGTTCGTCCTCCACATTCCGTCCCCAACAATTCAACAACAAACTCGAACATACACTCCCA
TAGAAAAGTTGATCGAATTTCTTGCAAGGCTCAAAGAATCAACACAAAACAGATGATTTG
GAGCGTGTGGGTCACAGATATCTCATCATGGAAGGAAGTTGATTTGCCTCATTCCTCCAC
TGCTGCTCTGTTGATCCACACTTTGCTTACAAAACTAAAGCGCAAAATTGATTTATCATC
CTGGTCTATTATAGAACAGAATAGTGACTCAATGATAGAGAGATACGTTGAAGATTATGA
AATTATTGATGAAATCTGGAAAAACCAAGAATCTGATAGTATTTCAAGATTTTGTTTGAA
TAAGACTCCATCCAAGTACACTATATTGCTTAGCCCTGATCTTTGTCTTCCAAATGGAAT
GCTTACTTTTCCTGGCAATTCATCAGAAGAGTGTCCAAGCACAGTTCGTAGATTACAGAT
GCAACACATATTAACTAAAACTGCACTTGAGTTATGTGGTTGGTTGCATGTACGTGAGGT
TGGTCACAGAACATGGAAGAAACTTTATTGTGTTCTGCGGAATTCAGGCCTTTATTACAG
TAACAAAACCACAAGCAAGGAACCACAGCACTTGGTATCTATTGCTGAAGTACATTCTGC
TCAAGTGTGGTTTCCCATTAACAATAAAAAACCAACCAGTAGTGCTCCTTATCCGCATTG
CTTCTGTCTCAAGCCTCGCAAGTTTAAGAATGGATCAATCATTAGATGGTTTTGTGTTGA
ATCAACCCACACCATGTCAGCATGGATAAGCGGACTAAGACTTACTATGAATGGAAGTCG
GTTTTATGAATCTTACCTGAGTGCACGAAGACAATCTCAATCTAATCTTGTTCGAAGTTC
AAGTGATCGAACAATTAATAGGCACGACTTTGCTGCGATGGATTTCCGTGGTGAAACGGG
AAGAGTAATTCATGATCCAAAAGAAGTTGCAATGTTGGAGTTGGAACAACAATCATCATG
GCGACGTCGATTAATCAATCGAACCATCACTGGACAAGCCTCCGATCGAAACATTGTTGG
AAGTTCTGCACCGACCAAGCAAGTTGCATTCTTTGCGCGAGCTATTCATCAAACACAAAC
ATGGTTCTATGGGAAAATAACAAGAGAAGAAGCAACAGAGGAATTACATAGGAATGGAAA
TGTTGACGGACTTTTTCTGGTACGTGACAGTCACACAATTCCTGGTGGTATCGTTGTTAC
TTTGTGCCACAACCAAAAATCTAGACACATACCCATTACACAGATTGAGCGAAACGGACA
GAACTTTTACACTGCTGACAACGGCGAGACTCGCTTTGTGGATATGATCCAGTTGGTTGA
TTTTCACCGATTAAACAAAGGGTCACTCCCATGTTTGCTACTTCATGAGTGTTCACATAG
TCAAATGTCATAGGTGCTTAAAACTTGTATGCAACAGATGCTCAGGAACTTTTGCATCAG
GATATTCATTATAAGTCTCTTTTTACTTTATTCGTTATACCTTGAGATCAAGTATTAAAC
ATATCAATTTTTTGAACATTATTATTTGATTTACAGACTTTCCAATCACTTTATGGGTAT
AAGTGCGGTGCTATTTTTGTTTTATTATTGGTGTTGTATTTTGCGAGTCATTTATAAATG
AAATACTGCCTTATTTATTCAGTACAAGCAATCCACTGTTTTCCTTCTGTCAACAGTAGT
GATTTTATAATTGTAACTTTTATTCAGAGCCTTTCACTTTTCCTAATGTGTTGAAACCAA
TTTAAATTGTGATTTAAAGTTCGATGAGTGTTTTGTTATTTTTTTGAATAAAAGCTTGCC
AGTCTAGCGAATACAACACAACAAGATGGTAATTTTAATGCACAATTAGGTTTTTTATTT
CACTAAATGCATGGACTC
| PANTHER |
Grb7 (IPR035032) - T[24-538] 6.8E-96 |
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[90-187] 8.27E-8 |
| Gene3D |
PH-like_dom_sf (IPR011993) - T[188-350] 5.7E-36 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[228-337] 10.895 |
| SMART |
PH_domain (IPR001849) - T[229-339] 3.0E-10 |
| Pfam |
PH_domain (IPR001849) - T[230-334] 1.7E-10 |
| Pfam |
BPS-dom (IPR015042) - T[371-407] 4.6E-9 |
| Gene3D |
SH2_dom_sf (IPR036860) - T[425-541] 1.2E-27 |
| SUPERFAMILY |
SH2_dom_sf (IPR036860) - T[434-538] 3.23E-25 |
| SMART |
SH2 (IPR000980) - T[439-528] 3.1E-21 |
| ProSiteProfiles |
SH2 (IPR000980) - T[441-537] 17.716 |
| Pfam |
SH2 (IPR000980) - T[441-522] 5.2E-14 |
| PRINTS |
SH2 (IPR000980) - T[441-455] 3.7E-5 - T[462-472] 3.7E-5 - T[511-525] 3.7E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRB14_HUMAN | 34.459 % | 269 | 1.68E-83 |
| GRB10_HUMAN | 36.215 % | 277 | 5.5E-86 |
| GRB7_HUMAN | 33.553 % | 258 | 3.32E-79 |
