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  1. Transcript 'KH2012:KH.C1.1049.v1...'
  2. Transcript 'Cisavi.CG.ENS81.R19....'
  3. Transcript 'Boleac.CG.SB_v3.S24....'
  4. Transcript 'Boleac.CG.SB_v3.S826...'
  5. Transcript 'KH2012:KH.C1.1049.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1049.v1.A.SL4-1

Possible name(s)

CLDN14; CLDN18; CLDN19

Location

KhC1 [3,527,163 / 3,536,843]

Sequences

Amino acid sequence

Length: 230

>KH.C1.1049.v1.A.SL4-1
QRFKMECQMICFVVGFLATTGCVFCTFWNEWAVSSPSASAPVLGPIWAFSGLWSECMQYS
TGQYQCNGFGMMKLPSYILAIRAMMCIALSLSVIGCFVTLIGMECSKLLDGNLSAKRNLM
RISGVLFLVAGVLTLASVSWYTGVVVEDFFSVFTQDNMIIYEMGAALYLGFVSSALALLT
AILCFCMPGPKPEDEDSPPYKYTPTGYTVREPYETKVQIPKSKDKYSEYV

Nucleotide sequence

Length: 987

>KH2012:KH.C1.1049.v1.A.SL4-1
GATCTGAAGTACAAAGGTAGCAACGCTTTAAAATGGAATGTCAAATGATTTGTTTCGTGG
TAGGATTCCTCGCAACCACAGGCTGTGTTTTCTGTACCTTCTGGAACGAATGGGCCGTGT
CAAGCCCGTCCGCAAGTGCCCCTGTGCTCGGCCCCATCTGGGCGTTCTCCGGTCTCTGGT
CTGAATGTATGCAGTACAGCACTGGACAGTATCAATGCAACGGTTTTGGAATGATGAAAC
TGCCAAGTTACATTCTCGCAATACGGGCAATGATGTGCATCGCGCTCTCACTATCGGTGA
TTGGCTGCTTTGTTACTTTAATCGGTATGGAATGTTCGAAATTATTGGACGGCAATCTTT
CTGCGAAGCGGAATCTTATGCGCATTTCTGGAGTTTTATTTCTTGTTGCTGGAGTTCTAA
CTCTTGCATCGGTGTCATGGTACACTGGAGTTGTGGTTGAGGATTTCTTTTCCGTTTTCA
CGCAAGATAATATGATCATATACGAAATGGGTGCGGCGCTGTATCTTGGATTCGTCAGCA
GTGCACTAGCTCTTCTAACAGCAATACTCTGCTTCTGCATGCCTGGACCTAAACCGGAAG
ATGAGGATTCGCCCCCTTACAAATATACGCCAACAGGTTACACTGTGCGGGAGCCTTACG
AAACCAAAGTACAAATCCCAAAATCCAAGGACAAATATTCCGAATATGTTTGATCAAAAT
GGCCGAAAAGGAAATAAACAAATATCAACTAAACTCAGTCTATATGGAAAGAAACTAAAG
CTATGTACGTTTGGTTTCCTAAACTTTATATTATTCGGTTATAACACTTTGTGTGCGTCA
TTTTGCCTTTGTATATTTCATTGCAAGAAATGTTTTCGCTATTTTCGATACGTTTAATTT
TGGAAGCGATATATACAGTTTCTATTTCTAAGTTTATTCAATAAAATGCATGCAGCGACT
GCGTGATCGTGCTGTTTTTTTAAAAAA

InterProScan

PANTHER
Claudin (IPR006187) - T[4-230] 4.4E-126
Pfam
PMP22/EMP/MP20/Claudin (IPR004031) - T[5-183] 6.3E-22
ProSitePatterns
Claudin_CS (IPR017974) - T[51-66] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLD19_HUMAN 32.579 % 113 5.45E-31
CLD18_HUMAN 28.372 % 102 2.0E-26
CLD14_HUMAN 35.165 % 103 6.78E-27