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  1. Transcript 'KH2012:KH.C1.1049.v1...'

Transcript Model

Transcript Id

KH2012:KH.C1.1049.v1.A.ND1-1

Possible name(s)

CLDN14; CLDN18; CLDN19

Location

KhC1 [3,527,163 / 3,536,847]

Sequences

Amino acid sequence

Length: 230

>KH.C1.1049.v1.A.ND1-1
QRFKMECQMICFVVGFLATTGCVFCTFWNEWAVSSPSASAPVLGPIWAFSGLWSECMQYS
TGQYQCNGFGMMKLPSYILAIRAMMCIALSLSVIGCFVTLIGMECSKLLDGNLSAKRNLM
RISGVLFLVAGVLTLASVSWYTGVVVEDFFSVFTQDNMIIYEMGAALYLGFVSSALALLT
AILCFCMPGPKPEDEDSPPYKYTPTGYTVREPYETKVQIPKSKDKYSEYV

Nucleotide sequence

Length: 991

>KH2012:KH.C1.1049.v1.A.ND1-1
TTAGGATCTGAAGTACAAAGGTAGCAACGCTTTAAAATGGAATGTCAAATGATTTGTTTC
GTGGTAGGATTCCTCGCAACCACAGGCTGTGTTTTCTGTACCTTCTGGAACGAATGGGCC
GTGTCAAGCCCGTCCGCAAGTGCCCCTGTGCTCGGCCCCATCTGGGCGTTCTCCGGTCTC
TGGTCTGAATGTATGCAGTACAGCACTGGACAGTATCAATGCAACGGTTTTGGAATGATG
AAACTGCCAAGTTACATTCTCGCAATACGGGCAATGATGTGCATCGCGCTCTCACTATCG
GTGATTGGCTGCTTTGTTACTTTAATCGGTATGGAATGTTCGAAATTATTGGACGGCAAT
CTTTCTGCGAAGCGGAATCTTATGCGCATTTCTGGAGTTTTATTTCTTGTTGCTGGAGTT
CTAACTCTTGCATCGGTGTCATGGTACACTGGAGTTGTGGTTGAGGATTTCTTTTCCGTT
TTCACGCAAGATAATATGATCATATACGAAATGGGTGCGGCGCTGTATCTTGGATTCGTC
AGCAGTGCACTAGCTCTTCTAACAGCAATACTCTGCTTCTGCATGCCTGGACCTAAACCG
GAAGATGAGGATTCGCCCCCTTACAAATATACGCCAACAGGTTACACTGTGCGGGAGCCT
TACGAAACCAAAGTACAAATCCCAAAATCCAAGGACAAATATTCCGAATATGTTTGATCA
AAATGGCCGAAAAGGAAATAAACAAATATCAACTAAACTCAGTCTATATGGAAAGAAACT
AAAGCTATGTACGTTTGGTTTCCTAAACTTTATATTATTCGGTTATAACACTTTGTGTGC
GTCATTTTGCCTTTGTATATTTCATTGCAAGAAATGTTTTCGCTATTTTCGATACGTTTA
ATTTTGGAAGCGATATATACAGTTTCTATTTCTAAGTTTATTCAATAAAATGCATGCAGC
GACTGCGTGATCGTGCTGTTTTTTTAAAAAA

InterProScan

PANTHER
Claudin (IPR006187) - T[4-230] 4.4E-126
Pfam
PMP22/EMP/MP20/Claudin (IPR004031) - T[5-183] 6.3E-22
ProSitePatterns
Claudin_CS (IPR017974) - T[51-66] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CLD19_HUMAN 32.579 % 113 5.45E-31
CLD18_HUMAN 28.372 % 102 2.0E-26
CLD14_HUMAN 35.165 % 103 6.78E-27