- Transcript 'KH2012:KH.C1.1043.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1043.v2.A.SL2-1
Possible name(s)
MTF1; ZNF143; ZNF76
Gene model
Location
KhC1 [6,348,279 / 6,354,063]
Amino acid sequence
Length: 461
>KH.C1.1043.v2.A.SL2-1
VFMTFSPSVDVCMPQENDIDGATLTFTSTDNHMKKEIKRFKCLYTGCKRVYTTAGNLKSH
QKTHRGEYYFICDQDGCGKAFLTSYSLKVHVRVHTKERPYRCSDQDCEKSFNTLYRLKAH
QRIHNGKTFNCSSEGCTKFFTTLSDLKKHYRTHTGERPFKCNIPECSKSFTVSHHLKSHI
RTHTGEKPFVCEEGGCTKAYAAQHSLKQHKSKDHSNNDMIAPTQQVNFDLDKAAEMLLGA
ADSLSQADLVGDILASSSNQLSCSQPPTQHNAPVENYQNPVVNNHHQPRDLCCHQPSNDQ
HKEENENLEQEEISTLTQAAMKVLSENKFQGVPIVIIKKETREVCHCPCKADGGTASVPE
TSSRVIVVDNVSNIPDQQTLNPDMNEVQSHYTMPGSSMQETYYNPAAQPVNNFQMSDLTV
EQATNPYPYKVHKEHETAESVFRDSNDAMMEMFESLPDMQN
Nucleotide sequence
Length: 2,801
>KH2012:KH.C1.1043.v2.A.SL2-1
GTGTTTATGACATTTTCTCCATCTGTGGATGTCTGTATGCCCCAAGAGAATGATATTGAT
GGTGCTACTCTCACTTTTACCAGCACCGACAACCACATGAAGAAAGAAATCAAGAGATTT
AAGTGCCTCTACACCGGTTGCAAGCGTGTTTACACCACAGCTGGCAACTTGAAGTCACAT
CAGAAGACACATAGAGGTGAATACTACTTCATCTGTGATCAGGATGGTTGTGGGAAAGCG
TTTCTTACTAGCTACAGTTTAAAAGTCCACGTACGTGTTCATACGAAGGAACGACCTTAC
CGATGTAGTGACCAAGATTGTGAAAAGTCATTTAACACATTATACAGGTTAAAGGCTCAC
CAGAGAATCCACAACGGGAAAACTTTCAACTGTAGTTCGGAAGGCTGCACAAAATTCTTT
ACTACACTAAGTGATTTGAAAAAACATTACCGAACCCACACAGGGGAGAGACCATTCAAA
TGTAACATTCCAGAATGTTCCAAATCTTTCACAGTGAGCCACCACCTAAAGTCACATATA
CGAACACACACAGGTGAAAAGCCATTTGTCTGTGAGGAAGGAGGATGTACGAAAGCATAT
GCAGCACAACACAGCTTGAAGCAACATAAGTCAAAAGATCATTCCAATAATGATATGATA
GCTCCAACACAACAAGTTAATTTTGACTTGGATAAAGCAGCTGAGATGTTGCTTGGTGCA
GCAGATTCACTCAGTCAAGCTGATCTTGTAGGTGACATATTAGCATCATCATCAAACCAG
TTAAGCTGCAGCCAGCCACCAACACAACATAACGCTCCAGTTGAAAATTACCAAAACCCT
GTAGTCAATAATCACCATCAACCAAGAGACCTATGCTGTCATCAACCATCTAATGATCAA
CATAAGGAAGAGAACGAAAACTTGGAACAAGAAGAAATTTCCACTCTAACTCAAGCTGCA
ATGAAAGTGCTATCAGAAAACAAGTTCCAGGGTGTTCCTATAGTCATCATTAAAAAAGAA
ACACGAGAAGTTTGTCACTGTCCTTGTAAAGCTGACGGCGGTACCGCAAGCGTGCCCGAA
ACCTCTTCCAGGGTTATAGTAGTTGATAATGTTAGTAATATACCTGACCAACAGACTCTT
AACCCTGACATGAATGAGGTGCAGAGTCATTACACCATGCCAGGCTCATCCATGCAAGAG
ACTTATTACAACCCTGCCGCGCAACCTGTCAACAACTTCCAAATGTCGGACTTAACAGTT
GAACAAGCCACGAACCCCTATCCCTACAAAGTACACAAGGAGCATGAAACGGCTGAAAGT
GTCTTCAGAGATTCTAACGATGCAATGATGGAAATGTTTGAATCCCTACCTGACATGCAG
AACTGAAACCTTGTTGTGATAACAACAACTCCCTCCAGTGCGTAACACTTGGTTGTGGTA
ACACGGTGAACCTGGAACAACATCCCAACTTCTCTGCTTCCAAATTTCCTGCCACTTCAG
CCAGTTAAACAGCAACAGCATTATTTCCAAACATTTTCACTTTCCTTATAAATGGCAATA
AAGTACCAAACACATTCTTCTTCTTTTCTTGTTTTTCTTTACTTTAACCAATCTCTTGTT
CTTTTGAAAATTTACAAATACCATGATAATAGAACCACCTGCAACTTCAAGGTATCACTT
CCTCCCTCCCTCTCGTACGACCTAAAGCTTTGTCTTCCAGGACAAGATACTTATTCTTCA
TAACCTGAAGTAGAATACCTCCGTTAAGAGGTGAACATGTAGTAGAATTTTCTTGCACTT
TATCATACCAATTAAAGTGCCTCTACTGTAACCTCTTATAGATGAAGTTAAAAACAAATA
TTTCACATTCTTACAAATATTTTTCACAAAACTTGGTGCTATAGAAATATTGAAATAATT
TCACAGCTTTTGTCAGTATCGTTTTCGTATCACAACAGCTGTAGGATTTATTCAGAAATT
TTAATTTTTTTCGCAAATTCGTTAACAAAAAATCCTATTTATCTAAACAAAGCTTTTCAC
AGCAATTTTATTTATAACACGAAAATAATACTATCTAAGGTATTTTGATACTACCACATA
TCACACCGCATTCTAAACAACAGCTTTCATCATCAAACAGAGCTGAAATTTCTTAAATCA
TTTAAAATTATGTTGATACTGTTCATGTGCCATTTTCCATATTTTCACGCTAGAACACCA
TGTGTTTAATCTATACACGGTTCGTTGTTTGCCTCCTCCATTTTTTCACATACTAAATTA
GACTTCTATCCAATTGTTACACAACTTTTGACCAACAAATGTTAATAATCTAGATCAAAT
TTTTGAAAATTAGCTGATACCAATCAAATGTTTGAAAATTAGCTGATACTAATTGTTTAG
AAAAACATTGCGTATTGTGTTGCTTTAATACTATTGAAAAGTGAGAATTTGAATTTGTGT
AATGCACCAAAATAATTATTGGTTTTCAACGCCCCATTTTTATCAAAATTTATTATAAAA
TTATTTTCGTTTTCACTCTTATTTTACAGGTACATCGACTGTGGAAGTAAAGACTTATAT
AAACAATTAATGCACATTTTCTGTTCTTTTGTAAAACTATGGATATGCCTACATCCAAAT
TTTCATGAACATAACCTGTTCAACTTTATTACACCTTTGAGTTCCATATTTTACATTTTT
TATTGCACAATTTTAAACTACAAATATTCTTTGTACAGCGTCACCAGCTCTGCTTCATGC
ATCAGTGTCATTAAAGTTGTAGTTTGGGTTTTCTATTGCAA
| PANTHER |
Metal_TF1 (IPR029796) - T[1-319] 2.0E-201 - T[319-460] 2.0E-201 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[36-81] 4.82E-8 - T[80-135] 1.15E-13 - T[140-196] 1.24E-20 - T[187-215] 9.73E-5 |
| SMART |
Znf_C2H2_type (IPR013087) - T[40-64] 0.0016 - T[70-94] 9.5E-4 - T[100-124] 7.8E-4 - T[129-153] 0.0065 - T[159-183] 0.013 - T[189-214] 0.25 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[40-69] 11.219 - T[70-99] 14.877 - T[100-129] 12.695 - T[129-158] 15.417 - T[159-188] 16.747 - T[189-219] 9.452 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[42-64] . - T[72-94] . - T[102-124] . - T[131-153] . - T[161-183] . - T[191-214] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF1_HUMAN | 60.268 % | 301 | 1.6E-94 |
| ZN143_HUMAN | 49.711 % | 186 | 1.45E-52 |
| ZNF76_HUMAN | 48.555 % | 181 | 4.48E-51 |
