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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C14.88.v1....'
  2. Transcript 'KH2012:KH.C1.1025.v2...'

Transcript Model

Transcript Id

KH2012:KH.C1.1025.v2.R.ND1-1

Possible name(s)

NFX1; NFXL1; ZNFX1

Location

KhC1 [7,322,468 / 7,336,184]

Sequences

Amino acid sequence

Length: 1,076

>KH.C1.1025.v2.R.ND1-1
DNLSRRYSHHHHGSQSEQYHQDVPVAEFYGGPHSGYIPHEVNYDGNYHQHNLYYGSPAGF
TNPPTYFGPHYGMTGGSSTFPMVNMPHGFEPNYYTEDATVGYPETNSFQRTTLMDNASAA
GKSRRFSRQRNVKEAGASGEVNMQFADEHSSSKNNKEKRSHSSKQPIRFSHQKVNGVENP
NRQKKDSSNKKSEARAKHENKLSEEKATKRISSKESKKSEVMKVDKRDQASVLHEQLTSG
TYECMVCCDHVRPPQAVWSCGTCYNVFHMGCIKKWARSPAARIEESGWRCPGCQNVTPKI
PASYYCFCGKQKEPEYRKGEMPHSCGELCGKARKNNPDCKHPCNILCHPGPCPQCPATIM
KRCRCGRVTSRVRCSQQKNFMCSEKCGKKKKCGRHFCEKVCHAGKCEDCDVIVKQSCYCG
GSVREVNCGSNEHNKQPLDKDEGCYSCANVCGKTLLCGNHKCEDLCHPGACKPCPLLPSL
LKVCPCTQTKLSDMKGEDGTEIRRKICTDPVPTCGKICNKPTSCGGEEIHLCKLPCHHGP
CLPCVDGESTIKCRCGKSEKEVPCSEFVKMETYICDRRCNKKRKCGKHKCGQMCCLDTEH
ACMQICGRKLTCGNHRCDETCHRGACHTCYNVSFDELRCYCNDKVIFPPIPCGMKPPECN
NECTRMHPCTHPIRHSCHTEENCPPCVELVKKTCNCGRTVRGNIMCHITNVSCGAPCSKM
LACGHKCQRPCHKGACCEDGEPCKQPCSIMRVECIHPCANPCHYGGPCPNTLCQATVTVK
CECGRREEQVECSAGGAVYQSMSSAAFATKSNDAINIDKMLQTRGLQCDEECSIAARNKR
FAEALRISDAEYGSKLKQQYSDFLMNMAKTDLAFIRTVEKDLINLVESAVHELAEAFQCK
SESLDEEPNRNVVATATKNVSKQPTPLLSDFIMEQVTTEKTYASAKSVQPKGRVLSSVKL
VSLRSAKSSEATGRPGIFNRKPSTGGATASTFKPSSTRYEVPRSSLHRLTPASDGRNNRP
RFPQVTSQDAVRPSVSRPEVKPSVKKYAPPHQRVTPAAGSSSTDKSNVIDYFDMTD

Nucleotide sequence

Length: 3,762

>KH2012:KH.C1.1025.v2.R.ND1-1
GATAATCTAAGTAGAAGATATTCCCATCATCATCATGGATCCCAAAGTGAGCAATACCAC
CAAGATGTACCAGTAGCTGAGTTTTATGGTGGACCTCATTCAGGTTACATCCCTCATGAA
GTTAACTATGATGGGAATTACCATCAGCATAACTTGTATTATGGATCACCTGCTGGTTTC
ACCAATCCACCAACGTATTTTGGTCCCCATTATGGTATGACTGGAGGAAGTAGCACTTTC
CCAATGGTTAACATGCCGCATGGATTTGAACCAAACTACTACACGGAAGATGCAACTGTA
GGTTATCCAGAAACTAATTCATTCCAAAGAACAACATTAATGGATAATGCTTCAGCAGCT
GGAAAATCGCGTCGTTTTAGTCGTCAACGCAACGTAAAGGAAGCTGGCGCAAGTGGAGAA
GTCAATATGCAATTCGCTGACGAACATTCATCATCGAAAAACAACAAAGAGAAAAGATCA
CATTCTTCTAAGCAACCAATACGATTTAGCCACCAGAAAGTTAATGGAGTTGAAAATCCA
AACCGACAAAAAAAAGACTCGAGCAATAAAAAGTCTGAGGCAAGAGCAAAGCATGAAAAC
AAGTTGTCTGAGGAAAAGGCAACAAAAAGAATTTCTTCCAAAGAAAGTAAAAAATCTGAA
GTTATGAAAGTTGATAAAAGAGACCAAGCTTCGGTTCTGCATGAGCAATTAACGTCCGGC
ACTTATGAATGTATGGTGTGTTGCGATCATGTGCGACCACCGCAGGCAGTATGGAGCTGT
GGGACGTGCTACAATGTTTTTCACATGGGATGTATTAAGAAATGGGCAAGATCTCCTGCA
GCCAGAATCGAAGAATCTGGTTGGAGATGCCCTGGTTGTCAAAACGTGACACCCAAGATA
CCTGCGTCATATTATTGCTTTTGTGGTAAACAGAAAGAGCCGGAATATCGAAAAGGTGAA
ATGCCGCACTCGTGTGGCGAGTTGTGCGGAAAAGCGAGAAAGAATAATCCCGACTGTAAG
CACCCGTGCAATATCTTGTGTCACCCTGGTCCCTGTCCCCAGTGTCCGGCCACTATAATG
AAGAGATGCAGATGCGGTCGCGTAACCTCGCGTGTCAGGTGCAGCCAACAGAAGAATTTT
ATGTGTTCGGAGAAGTGTGGAAAGAAGAAGAAATGTGGTCGTCATTTTTGTGAAAAAGTT
TGTCACGCGGGAAAATGCGAGGACTGTGATGTCATAGTTAAACAAAGTTGTTACTGTGGT
GGAAGTGTAAGGGAAGTTAACTGTGGTTCAAATGAACATAACAAGCAACCACTTGATAAA
GATGAAGGTTGTTACTCGTGTGCGAATGTGTGTGGCAAAACTCTGCTATGCGGCAACCAC
AAATGTGAAGATTTGTGTCATCCTGGTGCTTGTAAACCATGCCCACTACTCCCATCACTA
CTTAAAGTTTGTCCTTGTACACAGACCAAGTTGTCCGATATGAAGGGGGAAGATGGGACG
GAGATTAGGAGGAAAATATGTACGGATCCTGTCCCTACGTGTGGCAAGATATGCAACAAA
CCTACATCATGTGGGGGTGAGGAGATTCACTTGTGTAAACTGCCGTGTCATCATGGACCC
TGTTTACCATGTGTGGACGGGGAGAGCACCATTAAGTGCAGGTGTGGCAAGTCAGAGAAG
GAAGTTCCATGCAGTGAGTTTGTGAAGATGGAAACTTATATTTGTGACAGGAGATGTAAT
AAGAAGCGAAAATGTGGAAAACATAAATGTGGTCAGATGTGTTGTTTGGACACTGAGCAT
GCGTGTATGCAAATATGTGGACGCAAGCTTACATGCGGCAACCATCGTTGTGACGAGACT
TGTCACCGTGGTGCGTGCCATACTTGTTATAATGTAAGCTTTGATGAGCTGAGGTGTTAC
TGCAACGATAAAGTTATTTTCCCCCCAATTCCATGTGGAATGAAACCACCAGAGTGTAAT
AATGAATGCACAAGGATGCACCCATGCACACATCCAATTCGGCACTCGTGCCATACGGAA
GAGAATTGTCCTCCTTGTGTTGAACTAGTGAAGAAAACTTGCAACTGTGGTCGTACTGTA
CGTGGTAACATTATGTGCCATATCACCAATGTATCATGCGGTGCTCCGTGCTCGAAGATG
CTCGCCTGCGGACATAAGTGTCAGCGGCCTTGTCACAAAGGTGCATGCTGTGAAGATGGT
GAACCATGCAAACAACCTTGTAGTATAATGCGTGTTGAATGCATACACCCATGTGCCAAC
CCTTGTCATTATGGTGGCCCATGCCCTAATACTCTATGCCAAGCCACGGTAACCGTGAAA
TGTGAATGTGGCAGACGTGAAGAGCAGGTGGAATGCTCAGCGGGTGGCGCTGTTTATCAG
AGCATGAGTTCGGCAGCTTTTGCTACCAAATCTAACGACGCAATTAACATTGATAAAATG
CTACAGACCAGGGGTTTACAATGCGATGAGGAATGCAGTATCGCTGCAAGAAACAAACGA
TTTGCTGAAGCCCTTCGGATATCAGATGCTGAGTATGGTTCGAAATTAAAGCAACAATAT
TCAGATTTCCTTATGAACATGGCTAAAACTGACCTTGCTTTTATACGAACTGTGGAAAAA
GACTTGATAAACCTGGTTGAATCAGCTGTGCACGAGTTAGCTGAGGCATTCCAGTGTAAA
AGTGAAAGCTTGGACGAAGAACCTAACCGTAACGTGGTTGCTACAGCAACAAAAAACGTC
AGCAAACAGCCGACGCCCCTACTTAGTGACTTCATAATGGAACAAGTGACGACAGAAAAA
ACGTACGCGAGTGCAAAGTCAGTACAACCAAAAGGGCGAGTTCTTAGCTCGGTTAAGCTG
GTTTCTCTTCGTTCGGCCAAATCCTCTGAAGCGACCGGACGTCCTGGGATTTTCAACCGT
AAACCATCCACTGGCGGCGCTACTGCTTCGACATTTAAGCCGTCTTCTACTCGTTACGAA
GTCCCTCGATCTTCGTTACATCGGTTGACTCCTGCGTCTGACGGCCGGAATAATAGACCC
AGATTCCCGCAGGTGACTTCTCAAGACGCCGTACGACCTTCAGTATCTCGGCCAGAGGTT
AAACCATCTGTAAAAAAATATGCCCCACCTCACCAGCGTGTAACACCTGCCGCTGGCAGT
TCCTCAACCGATAAGTCGAATGTGATTGATTACTTCGATATGACTGATTAGGTGAACGGC
AGATCGTCGGTGGGCGAAGTTATGTACTGCAGTGTATTGTGTGTTTCCGAAAGGCAACAG
AAGTGAAACTTGTGGATTAATTTGGGAGATTTAGTGGCGCTGAGTCGCGTTTCTGTGTAC
GGAGTGTCACCAGTTTGTGACCAAATTTCTCTTAAGATTATTTTTGGGTGATTTTATGGA
AATATAATCCCTTCATCGACTCGCATGCTTTTGTCGTTTATTCAATACCAGCCGCTGTAG
CTACCAGCGATCGATTCAACTATATGCAGCTGCCGAAAGAAAATCCACTTCGATAATGAC
GTCATAATTGCACGTCATAACCATGCGAAATTTCTTTACCGGTAGCCATTGGGCAGGATT
AACTTCTACTAACTTTGGGCAGGATGACCGAAGTTTTATTTTAACATGTCCGGCAGTATG
TGGAACTACATCTTTTACTGAATATGTTTTTTCGTCCGAATATTATCGCATGTTTTGTAT
GAATGTATAATTTCCCCTTATCACTAAATAGTTCGCGCCACA

InterProScan

PANTHER
NFX1_fam (IPR034078) - T[8-222] 3.1E-289 - T[224-889] 3.1E-289 - T[889-1072] 3.1E-289
ProSiteProfiles
Znf_PHD-finger (IPR019787) - T[241-296] 9.179
ProSitePatterns
Zinc_finger_PHD-type_CS (IPR019786) - T[244-293] .
ProSiteProfiles
Znf_RING (IPR001841) - T[244-294] 9.981
Pfam
Znf_NFX1 (IPR000967) - T[330-356] 0.21 - T[392-409] 6.6E-5 - T[457-475] 5.6E-6 - T[524-544] 0.35 - T[585-595] 69.0 - T[612-629] 4.2E-4 - T[723-744] 0.077 - T[755-769] 7.3
SMART
Znf_NFX1 (IPR000967) - T[339-357] 0.093 - T[392-411] 3.3E-4 - T[457-476] 2.6E-4 - T[524-555] 28.0 - T[585-604] 16.0 - T[612-631] 0.044 - T[663-688] 44.0 - T[723-745] 0.27 - T[754-775] 6.7
SUPERFAMILY
R3H_dom_sf (IPR036867) - T[850-939] 3.92E-12
ProSiteProfiles
R3H_dom (IPR001374) - T[850-918] 9.769
Pfam
R3H_dom (IPR001374) - T[889-915] 6.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NFXL1_HUMAN 35.971 % 258 3.42E-72
NFX1_HUMAN 46.211 % 669 0