- Transcript 'KH2012:KH.C1.1025.v2...'
Transcript Model
Transcript Id
KH2012:KH.C1.1025.v2.R.ND1-1
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
KhC1 [7,322,468 / 7,336,184]
Amino acid sequence
Length: 1,076
>KH.C1.1025.v2.R.ND1-1
DNLSRRYSHHHHGSQSEQYHQDVPVAEFYGGPHSGYIPHEVNYDGNYHQHNLYYGSPAGF
TNPPTYFGPHYGMTGGSSTFPMVNMPHGFEPNYYTEDATVGYPETNSFQRTTLMDNASAA
GKSRRFSRQRNVKEAGASGEVNMQFADEHSSSKNNKEKRSHSSKQPIRFSHQKVNGVENP
NRQKKDSSNKKSEARAKHENKLSEEKATKRISSKESKKSEVMKVDKRDQASVLHEQLTSG
TYECMVCCDHVRPPQAVWSCGTCYNVFHMGCIKKWARSPAARIEESGWRCPGCQNVTPKI
PASYYCFCGKQKEPEYRKGEMPHSCGELCGKARKNNPDCKHPCNILCHPGPCPQCPATIM
KRCRCGRVTSRVRCSQQKNFMCSEKCGKKKKCGRHFCEKVCHAGKCEDCDVIVKQSCYCG
GSVREVNCGSNEHNKQPLDKDEGCYSCANVCGKTLLCGNHKCEDLCHPGACKPCPLLPSL
LKVCPCTQTKLSDMKGEDGTEIRRKICTDPVPTCGKICNKPTSCGGEEIHLCKLPCHHGP
CLPCVDGESTIKCRCGKSEKEVPCSEFVKMETYICDRRCNKKRKCGKHKCGQMCCLDTEH
ACMQICGRKLTCGNHRCDETCHRGACHTCYNVSFDELRCYCNDKVIFPPIPCGMKPPECN
NECTRMHPCTHPIRHSCHTEENCPPCVELVKKTCNCGRTVRGNIMCHITNVSCGAPCSKM
LACGHKCQRPCHKGACCEDGEPCKQPCSIMRVECIHPCANPCHYGGPCPNTLCQATVTVK
CECGRREEQVECSAGGAVYQSMSSAAFATKSNDAINIDKMLQTRGLQCDEECSIAARNKR
FAEALRISDAEYGSKLKQQYSDFLMNMAKTDLAFIRTVEKDLINLVESAVHELAEAFQCK
SESLDEEPNRNVVATATKNVSKQPTPLLSDFIMEQVTTEKTYASAKSVQPKGRVLSSVKL
VSLRSAKSSEATGRPGIFNRKPSTGGATASTFKPSSTRYEVPRSSLHRLTPASDGRNNRP
RFPQVTSQDAVRPSVSRPEVKPSVKKYAPPHQRVTPAAGSSSTDKSNVIDYFDMTD
Nucleotide sequence
Length: 3,762
>KH2012:KH.C1.1025.v2.R.ND1-1
GATAATCTAAGTAGAAGATATTCCCATCATCATCATGGATCCCAAAGTGAGCAATACCAC
CAAGATGTACCAGTAGCTGAGTTTTATGGTGGACCTCATTCAGGTTACATCCCTCATGAA
GTTAACTATGATGGGAATTACCATCAGCATAACTTGTATTATGGATCACCTGCTGGTTTC
ACCAATCCACCAACGTATTTTGGTCCCCATTATGGTATGACTGGAGGAAGTAGCACTTTC
CCAATGGTTAACATGCCGCATGGATTTGAACCAAACTACTACACGGAAGATGCAACTGTA
GGTTATCCAGAAACTAATTCATTCCAAAGAACAACATTAATGGATAATGCTTCAGCAGCT
GGAAAATCGCGTCGTTTTAGTCGTCAACGCAACGTAAAGGAAGCTGGCGCAAGTGGAGAA
GTCAATATGCAATTCGCTGACGAACATTCATCATCGAAAAACAACAAAGAGAAAAGATCA
CATTCTTCTAAGCAACCAATACGATTTAGCCACCAGAAAGTTAATGGAGTTGAAAATCCA
AACCGACAAAAAAAAGACTCGAGCAATAAAAAGTCTGAGGCAAGAGCAAAGCATGAAAAC
AAGTTGTCTGAGGAAAAGGCAACAAAAAGAATTTCTTCCAAAGAAAGTAAAAAATCTGAA
GTTATGAAAGTTGATAAAAGAGACCAAGCTTCGGTTCTGCATGAGCAATTAACGTCCGGC
ACTTATGAATGTATGGTGTGTTGCGATCATGTGCGACCACCGCAGGCAGTATGGAGCTGT
GGGACGTGCTACAATGTTTTTCACATGGGATGTATTAAGAAATGGGCAAGATCTCCTGCA
GCCAGAATCGAAGAATCTGGTTGGAGATGCCCTGGTTGTCAAAACGTGACACCCAAGATA
CCTGCGTCATATTATTGCTTTTGTGGTAAACAGAAAGAGCCGGAATATCGAAAAGGTGAA
ATGCCGCACTCGTGTGGCGAGTTGTGCGGAAAAGCGAGAAAGAATAATCCCGACTGTAAG
CACCCGTGCAATATCTTGTGTCACCCTGGTCCCTGTCCCCAGTGTCCGGCCACTATAATG
AAGAGATGCAGATGCGGTCGCGTAACCTCGCGTGTCAGGTGCAGCCAACAGAAGAATTTT
ATGTGTTCGGAGAAGTGTGGAAAGAAGAAGAAATGTGGTCGTCATTTTTGTGAAAAAGTT
TGTCACGCGGGAAAATGCGAGGACTGTGATGTCATAGTTAAACAAAGTTGTTACTGTGGT
GGAAGTGTAAGGGAAGTTAACTGTGGTTCAAATGAACATAACAAGCAACCACTTGATAAA
GATGAAGGTTGTTACTCGTGTGCGAATGTGTGTGGCAAAACTCTGCTATGCGGCAACCAC
AAATGTGAAGATTTGTGTCATCCTGGTGCTTGTAAACCATGCCCACTACTCCCATCACTA
CTTAAAGTTTGTCCTTGTACACAGACCAAGTTGTCCGATATGAAGGGGGAAGATGGGACG
GAGATTAGGAGGAAAATATGTACGGATCCTGTCCCTACGTGTGGCAAGATATGCAACAAA
CCTACATCATGTGGGGGTGAGGAGATTCACTTGTGTAAACTGCCGTGTCATCATGGACCC
TGTTTACCATGTGTGGACGGGGAGAGCACCATTAAGTGCAGGTGTGGCAAGTCAGAGAAG
GAAGTTCCATGCAGTGAGTTTGTGAAGATGGAAACTTATATTTGTGACAGGAGATGTAAT
AAGAAGCGAAAATGTGGAAAACATAAATGTGGTCAGATGTGTTGTTTGGACACTGAGCAT
GCGTGTATGCAAATATGTGGACGCAAGCTTACATGCGGCAACCATCGTTGTGACGAGACT
TGTCACCGTGGTGCGTGCCATACTTGTTATAATGTAAGCTTTGATGAGCTGAGGTGTTAC
TGCAACGATAAAGTTATTTTCCCCCCAATTCCATGTGGAATGAAACCACCAGAGTGTAAT
AATGAATGCACAAGGATGCACCCATGCACACATCCAATTCGGCACTCGTGCCATACGGAA
GAGAATTGTCCTCCTTGTGTTGAACTAGTGAAGAAAACTTGCAACTGTGGTCGTACTGTA
CGTGGTAACATTATGTGCCATATCACCAATGTATCATGCGGTGCTCCGTGCTCGAAGATG
CTCGCCTGCGGACATAAGTGTCAGCGGCCTTGTCACAAAGGTGCATGCTGTGAAGATGGT
GAACCATGCAAACAACCTTGTAGTATAATGCGTGTTGAATGCATACACCCATGTGCCAAC
CCTTGTCATTATGGTGGCCCATGCCCTAATACTCTATGCCAAGCCACGGTAACCGTGAAA
TGTGAATGTGGCAGACGTGAAGAGCAGGTGGAATGCTCAGCGGGTGGCGCTGTTTATCAG
AGCATGAGTTCGGCAGCTTTTGCTACCAAATCTAACGACGCAATTAACATTGATAAAATG
CTACAGACCAGGGGTTTACAATGCGATGAGGAATGCAGTATCGCTGCAAGAAACAAACGA
TTTGCTGAAGCCCTTCGGATATCAGATGCTGAGTATGGTTCGAAATTAAAGCAACAATAT
TCAGATTTCCTTATGAACATGGCTAAAACTGACCTTGCTTTTATACGAACTGTGGAAAAA
GACTTGATAAACCTGGTTGAATCAGCTGTGCACGAGTTAGCTGAGGCATTCCAGTGTAAA
AGTGAAAGCTTGGACGAAGAACCTAACCGTAACGTGGTTGCTACAGCAACAAAAAACGTC
AGCAAACAGCCGACGCCCCTACTTAGTGACTTCATAATGGAACAAGTGACGACAGAAAAA
ACGTACGCGAGTGCAAAGTCAGTACAACCAAAAGGGCGAGTTCTTAGCTCGGTTAAGCTG
GTTTCTCTTCGTTCGGCCAAATCCTCTGAAGCGACCGGACGTCCTGGGATTTTCAACCGT
AAACCATCCACTGGCGGCGCTACTGCTTCGACATTTAAGCCGTCTTCTACTCGTTACGAA
GTCCCTCGATCTTCGTTACATCGGTTGACTCCTGCGTCTGACGGCCGGAATAATAGACCC
AGATTCCCGCAGGTGACTTCTCAAGACGCCGTACGACCTTCAGTATCTCGGCCAGAGGTT
AAACCATCTGTAAAAAAATATGCCCCACCTCACCAGCGTGTAACACCTGCCGCTGGCAGT
TCCTCAACCGATAAGTCGAATGTGATTGATTACTTCGATATGACTGATTAGGTGAACGGC
AGATCGTCGGTGGGCGAAGTTATGTACTGCAGTGTATTGTGTGTTTCCGAAAGGCAACAG
AAGTGAAACTTGTGGATTAATTTGGGAGATTTAGTGGCGCTGAGTCGCGTTTCTGTGTAC
GGAGTGTCACCAGTTTGTGACCAAATTTCTCTTAAGATTATTTTTGGGTGATTTTATGGA
AATATAATCCCTTCATCGACTCGCATGCTTTTGTCGTTTATTCAATACCAGCCGCTGTAG
CTACCAGCGATCGATTCAACTATATGCAGCTGCCGAAAGAAAATCCACTTCGATAATGAC
GTCATAATTGCACGTCATAACCATGCGAAATTTCTTTACCGGTAGCCATTGGGCAGGATT
AACTTCTACTAACTTTGGGCAGGATGACCGAAGTTTTATTTTAACATGTCCGGCAGTATG
TGGAACTACATCTTTTACTGAATATGTTTTTTCGTCCGAATATTATCGCATGTTTTGTAT
GAATGTATAATTTCCCCTTATCACTAAATAGTTCGCGCCACA
| PANTHER |
NFX1_fam (IPR034078) - T[8-222] 3.1E-289 - T[224-889] 3.1E-289 - T[889-1072] 3.1E-289 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[241-296] 9.179 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[244-293] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[244-294] 9.981 |
| Pfam |
Znf_NFX1 (IPR000967) - T[330-356] 0.21 - T[392-409] 6.6E-5 - T[457-475] 5.6E-6 - T[524-544] 0.35 - T[585-595] 69.0 - T[612-629] 4.2E-4 - T[723-744] 0.077 - T[755-769] 7.3 |
| SMART |
Znf_NFX1 (IPR000967) - T[339-357] 0.093 - T[392-411] 3.3E-4 - T[457-476] 2.6E-4 - T[524-555] 28.0 - T[585-604] 16.0 - T[612-631] 0.044 - T[663-688] 44.0 - T[723-745] 0.27 - T[754-775] 6.7 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[850-939] 3.92E-12 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[850-918] 9.769 |
| Pfam |
R3H_dom (IPR001374) - T[889-915] 6.8E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 35.971 % | 258 | 3.42E-72 |
| NFX1_HUMAN | 46.211 % | 669 | 0 |
