- Transcript 'KH2012:KH.C1.1025.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1025.v1.A.SL2-1
Possible name(s)
NFX1; NFXL1; ZNFX1
Gene model
Location
KhC1 [7,322,468 / 7,336,840]
Amino acid sequence
Length: 1,115
>KH.C1.1025.v1.A.SL2-1
CSVKEVCVCLFFNVMSFGKTVYGGFPGPPDGRNHDSANQDNLSRRYSHHHHGSQSEQYHQ
DVPVAEFYGGPHSGYIPHEVNYDGNYHQHNLYYGSPAGFTNPPTYFGPHYGMTGGSSTFP
MVNMPHGFEPNYYTEDATVGYPETNSFQRTTLMDNASAAGKSRRFSRQRNVKEAGASGEV
NMQFADEHSSSKNNKEKRSHSSKQPIRFSHQKVNGVENPNRQKKDSSNKKSEARAKHENK
LSEEKATKRISSKESKKSEVMKVDKRDQASVLHEQLTSGTYECMVCCDHVRPPQAVWSCG
TCYNVFHMGCIKKWARSPAARIEESGWRCPGCQNVTPKIPASYYCFCGKQKEPEYRKGEM
PHSCGELCGKARKNNPDCKHPCNILCHPGPCPQCPATIMKRCRCGRVTSRVRCSQQKNFM
CSEKCGKKKKCGRHFCEKVCHAGKCEDCDVIVKQSCYCGGSVREVNCGSNEHNKQPLDKD
EGCYSCANVCGKTLLCGNHKCEDLCHPGACKPCPLLPSLLKVCPCTQTKLSDMKGEDGTE
IRRKICTDPVPTCGKICNKPTSCGGEEIHLCKLPCHHGPCLPCVDGESTIKCRCGKSEKE
VPCSEFVKMETYICDRRCNKKRKCGKHKCGQMCCLDTEHACMQICGRKLTCGNHRCDETC
HRGACHTCYNVSFDELRCYCNDKVIFPPIPCGMKPPECNNECTRMHPCTHPIRHSCHTEE
NCPPCVELVKKTCNCGRTVRGNIMCHITNVSCGAPCSKMLACGHKCQRPCHKGACCEDGE
PCKQPCSIMRVECIHPCANPCHYGGPCPNTLCQATVTVKCECGRREEQVECSAGGAVYQS
MSSAAFATKSNDAINIDKMLQTRGLQCDEECSIAARNKRFAEALRISDAEYGSKLKQQYS
DFLMNMAKTDLAFIRTVEKDLINLVESAVHELAEAFQCKSESLDEEPNRNVVATATKNVS
KQPTPLLSDFIMEQVTTEKTYASAKSVQPKGRVLSSVKLVSLRSAKSSEATGRPGIFNRK
PSTGGATASTFKPSSTRYEVPRSSLHRLTPASDGRNNRPRFPQVTSQDAVRPSVSRPEVK
PSVKKYAPPHQRVTPAAGSSSTDKSNVIDYFDMTD
Nucleotide sequence
Length: 3,879
>KH2012:KH.C1.1025.v1.A.SL2-1
TGTTCTGTTAAAGAAGTTTGTGTCTGTTTGTTCTTTAATGTCATGAGCTTTGGTAAAACT
GTATATGGAGGATTTCCTGGCCCACCTGACGGGAGAAACCATGATTCTGCAAATCAAGAT
AATCTAAGTAGAAGATATTCCCATCATCATCATGGATCCCAAAGTGAGCAATACCACCAA
GATGTACCAGTAGCTGAGTTTTATGGTGGACCTCATTCAGGTTACATCCCTCATGAAGTT
AACTATGATGGGAATTACCATCAGCATAACTTGTATTATGGATCACCTGCTGGTTTCACC
AATCCACCAACGTATTTTGGTCCCCATTATGGTATGACTGGAGGAAGTAGCACTTTCCCA
ATGGTTAACATGCCGCATGGATTTGAACCAAACTACTACACGGAAGATGCAACTGTAGGT
TATCCAGAAACTAATTCATTCCAAAGAACAACATTAATGGATAATGCTTCAGCAGCTGGA
AAATCGCGTCGTTTTAGTCGTCAACGCAACGTAAAGGAAGCTGGCGCAAGTGGAGAAGTC
AATATGCAATTCGCTGACGAACATTCATCATCGAAAAACAACAAAGAGAAAAGATCACAT
TCTTCTAAGCAACCAATACGATTTAGCCACCAGAAAGTTAATGGAGTTGAAAATCCAAAC
CGACAAAAAAAAGACTCGAGCAATAAAAAGTCTGAGGCAAGAGCAAAGCATGAAAACAAG
TTGTCTGAGGAAAAGGCAACAAAAAGAATTTCTTCCAAAGAAAGTAAAAAATCTGAAGTT
ATGAAAGTTGATAAAAGAGACCAAGCTTCGGTTCTGCATGAGCAATTAACGTCCGGCACT
TATGAATGTATGGTGTGTTGCGATCATGTGCGACCACCGCAGGCAGTATGGAGCTGTGGG
ACGTGCTACAATGTTTTTCACATGGGATGTATTAAGAAATGGGCAAGATCTCCTGCAGCC
AGAATCGAAGAATCTGGTTGGAGATGCCCTGGTTGTCAAAACGTGACACCCAAGATACCT
GCGTCATATTATTGCTTTTGTGGTAAACAGAAAGAGCCGGAATATCGAAAAGGTGAAATG
CCGCACTCGTGTGGCGAGTTGTGCGGAAAAGCGAGAAAGAATAATCCCGACTGTAAGCAC
CCGTGCAATATCTTGTGTCACCCTGGTCCCTGTCCCCAGTGTCCGGCCACTATAATGAAG
AGATGCAGATGCGGTCGCGTAACCTCGCGTGTCAGGTGCAGCCAACAGAAGAATTTTATG
TGTTCGGAGAAGTGTGGAAAGAAGAAGAAATGTGGTCGTCATTTTTGTGAAAAAGTTTGT
CACGCGGGAAAATGCGAGGACTGTGATGTCATAGTTAAACAAAGTTGTTACTGTGGTGGA
AGTGTAAGGGAAGTTAACTGTGGTTCAAATGAACATAACAAGCAACCACTTGATAAAGAT
GAAGGTTGTTACTCGTGTGCGAATGTGTGTGGCAAAACTCTGCTATGCGGCAACCACAAA
TGTGAAGATTTGTGTCATCCTGGTGCTTGTAAACCATGCCCACTACTCCCATCACTACTT
AAAGTTTGTCCTTGTACACAGACCAAGTTGTCCGATATGAAGGGGGAAGATGGGACGGAG
ATTAGGAGGAAAATATGTACGGATCCTGTCCCTACGTGTGGCAAGATATGCAACAAACCT
ACATCATGTGGGGGTGAGGAGATTCACTTGTGTAAACTGCCGTGTCATCATGGACCCTGT
TTACCATGTGTGGACGGGGAGAGCACCATTAAGTGCAGGTGTGGCAAGTCAGAGAAGGAA
GTTCCATGCAGTGAGTTTGTGAAGATGGAAACTTATATTTGTGACAGGAGATGTAATAAG
AAGCGAAAATGTGGAAAACATAAATGTGGTCAGATGTGTTGTTTGGACACTGAGCATGCG
TGTATGCAAATATGTGGACGCAAGCTTACATGCGGCAACCATCGTTGTGACGAGACTTGT
CACCGTGGTGCGTGCCATACTTGTTATAATGTAAGCTTTGATGAGCTGAGGTGTTACTGC
AACGATAAAGTTATTTTCCCCCCAATTCCATGTGGAATGAAACCACCAGAGTGTAATAAT
GAATGCACAAGGATGCACCCATGCACACATCCAATTCGGCACTCGTGCCATACGGAAGAG
AATTGTCCTCCTTGTGTTGAACTAGTGAAGAAAACTTGCAACTGTGGTCGTACTGTACGT
GGTAACATTATGTGCCATATCACCAATGTATCATGCGGTGCTCCGTGCTCGAAGATGCTC
GCCTGCGGACATAAGTGTCAGCGGCCTTGTCACAAAGGTGCATGCTGTGAAGATGGTGAA
CCATGCAAACAACCTTGTAGTATAATGCGTGTTGAATGCATACACCCATGTGCCAACCCT
TGTCATTATGGTGGCCCATGCCCTAATACTCTATGCCAAGCCACGGTAACCGTGAAATGT
GAATGTGGCAGACGTGAAGAGCAGGTGGAATGCTCAGCGGGTGGCGCTGTTTATCAGAGC
ATGAGTTCGGCAGCTTTTGCTACCAAATCTAACGACGCAATTAACATTGATAAAATGCTA
CAGACCAGGGGTTTACAATGCGATGAGGAATGCAGTATCGCTGCAAGAAACAAACGATTT
GCTGAAGCCCTTCGGATATCAGATGCTGAGTATGGTTCGAAATTAAAGCAACAATATTCA
GATTTCCTTATGAACATGGCTAAAACTGACCTTGCTTTTATACGAACTGTGGAAAAAGAC
TTGATAAACCTGGTTGAATCAGCTGTGCACGAGTTAGCTGAGGCATTCCAGTGTAAAAGT
GAAAGCTTGGACGAAGAACCTAACCGTAACGTGGTTGCTACAGCAACAAAAAACGTCAGC
AAACAGCCGACGCCCCTACTTAGTGACTTCATAATGGAACAAGTGACGACAGAAAAAACG
TACGCGAGTGCAAAGTCAGTACAACCAAAAGGGCGAGTTCTTAGCTCGGTTAAGCTGGTT
TCTCTTCGTTCGGCCAAATCCTCTGAAGCGACCGGACGTCCTGGGATTTTCAACCGTAAA
CCATCCACTGGCGGCGCTACTGCTTCGACATTTAAGCCGTCTTCTACTCGTTACGAAGTC
CCTCGATCTTCGTTACATCGGTTGACTCCTGCGTCTGACGGCCGGAATAATAGACCCAGA
TTCCCGCAGGTGACTTCTCAAGACGCCGTACGACCTTCAGTATCTCGGCCAGAGGTTAAA
CCATCTGTAAAAAAATATGCCCCACCTCACCAGCGTGTAACACCTGCCGCTGGCAGTTCC
TCAACCGATAAGTCGAATGTGATTGATTACTTCGATATGACTGATTAGGTGAACGGCAGA
TCGTCGGTGGGCGAAGTTATGTACTGCAGTGTATTGTGTGTTTCCGAAAGGCAACAGAAG
TGAAACTTGTGGATTAATTTGGGAGATTTAGTGGCGCTGAGTCGCGTTTCTGTGTACGGA
GTGTCACCAGTTTGTGACCAAATTTCTCTTAAGATTATTTTTGGGTGATTTTATGGAAAT
ATAATCCCTTCATCGACTCGCATGCTTTTGTCGTTTATTCAATACCAGCCGCTGTAGCTA
CCAGCGATCGATTCAACTATATGCAGCTGCCGAAAGAAAATCCACTTCGATAATGACGTC
ATAATTGCACGTCATAACCATGCGAAATTTCTTTACCGGTAGCCATTGGGCAGGATTAAC
TTCTACTAACTTTGGGCAGGATGACCGAAGTTTTATTTTAACATGTCCGGCAGTATGTGG
AACTACATCTTTTACTGAATATGTTTTTTCGTCCGAATATTATCGCATGTTTTGTATGAA
TGTATAATTTCCCCTTATCACTAAATAGTTCGCGCCACA
| PANTHER |
NFX1_fam (IPR034078) - T[32-259] 1.0E-289 - T[261-928] 1.0E-289 - T[928-1111] 1.0E-289 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[280-335] 9.179 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[283-332] . |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[283-333] 9.981 |
| Pfam |
Znf_NFX1 (IPR000967) - T[369-395] 0.2 - T[431-448] 6.9E-5 - T[496-514] 5.8E-6 - T[563-583] 0.37 - T[624-634] 72.0 - T[651-668] 4.3E-4 - T[762-783] 0.08 - T[794-808] 7.5 |
| SMART |
Znf_NFX1 (IPR000967) - T[378-396] 0.093 - T[431-450] 3.3E-4 - T[496-515] 2.6E-4 - T[563-594] 28.0 - T[624-643] 16.0 - T[651-670] 0.044 - T[702-727] 44.0 - T[762-784] 0.27 - T[793-814] 6.7 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[889-957] 9.769 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[889-978] 4.12E-12 |
| Pfam |
R3H_dom (IPR001374) - T[928-954] 7.3E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFXL1_HUMAN | 35.971 % | 258 | 5.22E-72 |
| NFX1_HUMAN | 46.211 % | 669 | 0 |
