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TRANSCRIPT CARD

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  1. Region 'REG00000366'
  2. Molecular Tool 'Neurogenin-MO (Imai 2009)'
  3. Transcript 'KH2012:KH.C2.10.v3.A...'
  4. Transcript 'KH2012:KH.C1.101.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.101.v1.A.SL1-1

Possible name(s)

CDIPT

Location

KhC1 [1,298,740 / 1,301,235]

Sequences

Amino acid sequence

Length: 197

>KH.C1.101.v1.A.SL1-1
YVRIVLAIASAYYMPFDYVTASLCYVISVGLDAIDGYAARVFNQGTKFGAMLDQLTDRAS
TATLVMTLSYFYPKYMFLFQMSLVIDIICHWLHLHVSIMKGSSHKSMGLDSNPIMKVYYT
SRPVLFFMCAGNELFYSMLYLLYFTEGPIVLGVSLFRVCLFVSFPIMAVKTLISIIHLMD
ASIRLCAIDADDRNKSN

Nucleotide sequence

Length: 1,221

>KH2012:KH.C1.101.v1.A.SL1-1
GATACGTCCGTATAGTGCTTGCTATAGCTTCAGCTTATTATATGCCGTTTGATTACGTCA
CTGCTTCTTTATGTTACGTCATAAGCGTTGGTTTGGACGCAATAGATGGATATGCTGCCA
GAGTTTTTAACCAGGGCACAAAGTTTGGGGCAATGTTGGACCAGTTGACTGACAGAGCAA
GTACTGCTACACTGGTGATGACACTCAGTTACTTCTATCCCAAATACATGTTCTTGTTCC
AAATGAGCTTAGTGATTGATATCATCTGCCATTGGTTGCACCTCCATGTCTCTATTATGA
AAGGTTCAAGCCATAAATCAATGGGATTGGATAGCAACCCAATCATGAAGGTTTATTATA
CATCAAGGCCTGTTCTGTTCTTCATGTGTGCTGGAAATGAATTGTTCTACTCCATGCTCT
ATCTTCTTTATTTCACCGAAGGGCCTATTGTGTTGGGCGTGAGTCTGTTTCGTGTTTGTC
TCTTTGTTTCATTCCCAATCATGGCAGTAAAGACACTGATCAGTATCATACACCTCATGG
ACGCTTCTATTCGCTTGTGTGCAATTGATGCGGATGATAGAAATAAGTCAAACTAAATCC
ACTTTTAAGATTTCATGCACAACTTTCTAGTTTTATCATTTAAACCATAATCTTTTGGAT
TAATTTGTATTATAAATCTAAAAAAGTTATTTTGTTATTTTTTTACCTGCACCAATCTGA
GAGGCAGGGTTACTCACTTTTAATATGCTTGGTAGCACCAGTTATTATAAACTATAAAGT
TTTAATTTGTTTCTTGTTAAAAAAGTACCATAGATTATAGAGAAGGTACATAAAAGCCAA
GTGTAACTGTTGTTGTTGAAGCTGCTTTCGTAATTGTTTCTTGTTGTTGTACACCAACTA
CCTATGTAAAAAGTTAAGCCACATATATTCACTATATTATTTCAACTGTGTAATTTATTG
CAGTCGTTTTAGCAACACTGTAACTGTATCTTAAATCAAAAATATGTTCGCAGTAGTATT
ATCAGGTTTTACTAATTTCTCGTTCTTGGTTCCATAGCTTTCACATTGTAATATAAACTG
TATCATGCAAAAACATTTATCAAATATCATGTTTTATGCTGCTGTTTTAACTGTGCTGTG
TATTGATTTTGTGTTCATAGTACTTTTTAAAGCAAAATGAATAAGTCAATGTAATTAGAT
TATATTCTAACTGATCTATTA

InterProScan

PIRSF
CDP_diag_ino_3_P_euk (IPR014387) - T[1-197] 6.3E-73
Pfam
CDP-OH_P_trans (IPR000462) - T[2-57] 7.0E-10
ProSitePatterns
CDP-OH_P_trans (IPR000462) - T[35-57] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CDIPT_HUMAN 54.545 % 221 5.7E-74