- Transcript 'KH2012:KH.C1.10.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.10.v3.A.ND1-1
Possible name(s)
LASP1; NEB; NRAP
Gene model
Location
KhC1 [837,267 / 848,214]
Amino acid sequence
Length: 239
>KH.C1.10.v3.A.ND1-1
VFNMNPPCARCKKTVYPTEKLSCLDKTWHKSCFTCETCNLKLTMKTYKGYNKLPYCNTHY
PTTRFTAVSDTPENKRLAQQQKNQSEVVYRKDKMNALKDFTQVAETVSSRTATQASKLAS
NISYQTAPHEVGRDGPVPVENIVNRRAPPGSAPAYSAPQPQPPAPVVAQPPPPVQAKSPT
TTPKYVAIYDYAAADDDEVSIQEGDKLIDVTVIDEGWMEGRNARTGAYGMFPSNYVQKV
Nucleotide sequence
Length: 1,947
>KH2012:KH.C1.10.v3.A.ND1-1
GATTACTACGCGTTATATTTGCCGCTTATACGCTATGCTGTAAAGTGCATTGTTTTAGTG
ATTGATAATGACTGTAGTGGTAGGGTAAAGGAAAAAACTGAAACAGTATCTTAAGGTTTA
AGTTTAAGTATTTAACATGAATCCCCCGTGTGCAAGATGCAAGAAGACGGTCTACCCCAC
GGAAAAGCTTTCGTGCTTGGACAAGACGTGGCACAAATCCTGCTTCACGTGCGAGACATG
TAACCTCAAACTTACTATGAAGACTTATAAGGGGTACAACAAACTTCCATACTGCAACAC
ACACTACCCAACCACGAGATTCACTGCTGTTTCAGACACACCGGAAAATAAACGACTTGC
CCAACAACAGAAAAATCAATCCGAAGTAGTATACAGAAAGGACAAGATGAACGCTCTAAA
GGATTTCACTCAGGTGGCAGAAACAGTATCAAGCAGAACAGCGACCCAAGCCTCGAAACT
TGCATCTAACATCAGCTACCAGACGGCGCCCCATGAAGTCGGTCGTGACGGTCCAGTCCC
CGTGGAAAATATTGTCAACAGAAGAGCGCCGCCAGGTAGCGCACCTGCGTATTCTGCACC
GCAACCACAACCACCTGCACCAGTAGTAGCGCAACCGCCACCTCCAGTACAAGCGAAGTC
ACCTACTACAACACCGAAGTACGTAGCTATATACGACTACGCCGCTGCTGACGACGACGA
AGTCTCAATACAAGAAGGCGATAAGTTGATTGATGTGACGGTTATAGACGAGGGGTGGAT
GGAAGGAAGAAATGCAAGAACAGGAGCTTACGGGATGTTTCCGAGCAACTATGTACAGAA
AGTTTAACAGATTTACCACAAAGCAAAACAGCGTGACACCTAATGCTATGAACTGCTCTG
TAACTCGATTAAAATGACCCGCAACACAGAATGGAAAATGCTGACAAAAGTTTTTTACAT
GCGCTCTACTCAAATGAAGAAATGGCACTTCAAAACTATTCTACACAATATGTGAACTGC
TATTTACTCTTCGTAAGCATGCATACACAAAACGGGAAATAGGCTTTTAATGATGTATTT
TGTTTGGTATACATCAAAACTGAGGCAAAAGTAATCTCTATGTAAAAGTTATCCCAAAAT
ATTTTTATTTCGTGCAAAATTTGAAGCATTCCGTTTCTCGGTACATTCCAACACAAATCA
TTCCAAGCGACAAATACCATTTATACACCACACATACATATTGCGTATATTTCTGCATTT
GCTACTAAATTGTAAGAATGTACATGTCTTCGCTCGGTTTAATATTCCGTATACTGCGGT
TTTTATTTAACTAACCTTCGCTTGGTTAAAATACCTGCTGACGGACGGACGCTGCTTTTA
CTTACGTAAACTCCCCACTCGAATTCGGCACAAATTGCTAATTTGTTACAGATGTTCTAA
CCCTCATTGACTCAAATACAACCTGGTGACAGAAGCGAATTGCTTTGTGTGGTTTTTGTA
TTAAGATACGTGTATAGAATATATAGTAGGGTGGGGGAAGATGGGACACCTTTAGCACAT
AATATCCAGATATCCTGATCGTGTTTTAAACAATTAACAACGGTCTATGAGAGTACGAGG
ATATAGTTTCATATTTCTTTGAATGTTTTTTGTTTACTACTAAATGGGATGAGAAAATAG
AGTTAAAAAGTGTCCCATCTCCCCCCATCATACTAGATAGTGCATCAGCGTCTGTATGAA
TACGTAACTTTTATTCCGAGTGTATGTATGGCGGCAAAAGCGATTTCTTTTGTGTGTATG
GTCGTTTATGTTAAGGTTAACGTGTGATGTATATGCGTATCTAACTTATGTATAAAGTGT
ATATATAATGTATGTATGGATACTTAACGAAAATACGAAGCGTGTAATAGTATAACAGCA
TGTGTGTTGATGCTTAACGAAAATACG
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[6-66] 13.197 |
| SMART |
Znf_LIM (IPR001781) - T[7-59] 1.2E-14 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[8-42] . |
| Pfam |
Znf_LIM (IPR001781) - T[8-61] 5.3E-13 |
| ProSiteProfiles |
Nebulin_repeat (IPR000900) - T[64-92] 9.252 - T[99-125] 5.908 |
| SMART |
Nebulin_repeat (IPR000900) - T[65-95] 0.045 - T[100-130] 1.1 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[167-238] 8.79E-21 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[180-239] 16.217 |
| PRINTS |
SH3_domain (IPR001452) - T[183-193] 3.7E-8 - T[197-212] 3.7E-8 - T[214-223] 3.7E-8 - T[227-239] 3.7E-8 |
| SMART |
SH3_domain (IPR001452) - T[183-239] 1.7E-15 |
| Pfam |
SH3_domain (IPR001452) - T[186-233] 1.8E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NRAP_HUMAN | 47.826 % | 84 | 1.76E-18 |
| LASP1_HUMAN | 43.893 % | 206 | 8.47E-67 |
