- Transcript 'KH2012:KH.C10.59.v4....'
Transcript Model
Transcript Id
KH2012:KH.C10.59.v4.A.nonSL3-1
Possible name(s)
CADM4; NECTIN1; NECTIN3
Gene model
Location
KhC10 [2,527,624 / 2,544,734]
Amino acid sequence
Length: 607
>KH.C10.59.v4.A.nonSL3-1
IPRILKAALLLGCFCCYGVHGTNVIQGESAFIPCYNPETASQFPNMLVILEFQPTPTAPQ
QLVSHYQPAQLKDPVVFATGSRYRGRLQFMNTGQLEIKFISLPDEGTFTCTAQVYSLAPS
KIITSVIVYVAPQFEVRKVNDPLLISDGGTMVNAAECIASNGKPPAVVFWGTNRHLDFDQ
TATNSSTTPLLTTAVSTLHVEPTKFYNKQSFYCEMRHPSIPNSKRETIYLNVTYPPETPT
ITVTADGLSLTCISHANPPATISWLLPASAPSRTFMGPTVSMMSPNTAERSNDTYTCTAN
NGIGVAVQSTITAGEASAVIVVTKESNVGIMVGAIIGSLVVLAIIIALIYFFIIKPAREK
DTGPYDQTIQPFKADSRQSSGRFESTSRSRPLIEHANESLNQNRPPSPNQPPPEDVPDSG
SSDSDSSEGNHDVDFDVDPSTNLVDRPGEPAGITSRASVNFQPYWRNSISEARRKRPSTS
PASRRSRIEPKQEESPSPAPRQQQPRYDYPPEGSSYDENDQESPTLQYNRHGYPDEEFSD
PYHQPAFVQYPPEPHQPPRRTDSLPQYEPKYTEIDHGNYKKGTGQRRPQYEEPVEYAQIR
HGYSHVV
Nucleotide sequence
Length: 2,489
>KH2012:KH.C10.59.v4.A.nonSL3-1
ATTCCAAGAATACTCAAAGCAGCGCTTCTGTTGGGTTGTTTTTGTTGCTATGGAGTGCAT
GGAACTAATGTAATACAGGGTGAGTCGGCTTTCATCCCATGTTACAACCCTGAAACTGCC
TCACAGTTTCCGAACATGTTGGTTATATTAGAATTTCAACCAACACCAACTGCTCCTCAG
CAGCTAGTTAGCCATTACCAGCCTGCTCAGCTCAAAGACCCAGTTGTGTTTGCGACTGGT
AGTCGATATAGAGGACGCCTACAATTCATGAACACTGGTCAGCTTGAGATTAAATTCATC
AGCTTACCTGACGAGGGAACTTTCACATGCACAGCACAAGTATACTCACTTGCACCAAGC
AAGATTATAACATCTGTCATTGTTTATGTTGCCCCTCAGTTTGAGGTTAGAAAAGTAAAT
GATCCTCTACTAATTAGTGATGGTGGCACGATGGTCAATGCTGCAGAATGCATTGCTAGT
AATGGTAAGCCACCAGCTGTGGTTTTCTGGGGCACAAACCGTCACCTAGATTTCGACCAA
ACTGCTACAAACAGCAGCACAACACCCCTTCTCACAACTGCAGTGTCTACACTTCATGTT
GAACCAACCAAATTCTACAACAAACAATCCTTCTACTGTGAGATGAGACATCCCTCCATT
CCCAACAGCAAGCGAGAAACCATATACCTTAATGTTACTTACCCTCCAGAAACCCCCACC
ATCACAGTAACTGCTGATGGCTTGAGTCTTACATGTATTTCCCATGCTAACCCTCCGGCA
ACTATATCATGGTTGTTGCCAGCGTCGGCACCTTCGCGCACTTTTATGGGTCCAACTGTG
TCCATGATGTCACCGAACACGGCCGAGCGCTCCAACGACACATACACTTGCACAGCAAAT
AATGGAATAGGAGTAGCAGTACAGAGCACCATTACTGCTGGGGAGGCATCAGCTGTCATT
GTTGTGACAAAAGAAAGCAATGTTGGAATAATGGTTGGAGCAATCATTGGAAGTTTGGTT
GTCCTTGCGATCATTATTGCTCTCATCTACTTCTTCATCATAAAACCTGCCAGAGAAAAA
GATACAGGGCCCTATGACCAAACTATACAACCTTTTAAAGCAGACAGCCGACAATCGAGT
GGTCGATTTGAATCCACTTCAAGGTCGCGACCTTTAATCGAACACGCGAACGAGAGCTTA
AACCAAAACCGACCCCCTAGTCCCAACCAACCTCCACCTGAAGATGTTCCCGATAGTGGC
AGCAGTGACTCTGATTCAAGCGAGGGCAACCATGATGTAGATTTTGATGTTGATCCTTCA
ACAAACTTGGTGGATCGACCAGGAGAACCAGCCGGCATCACCAGCAGGGCATCTGTCAAT
TTCCAGCCTTACTGGAGAAATTCTATCTCTGAGGCGCGCCGCAAGCGACCCAGCACCTCC
CCAGCCTCCCGTCGAAGCCGTATTGAACCCAAACAAGAAGAATCTCCGTCCCCCGCCCCA
CGTCAGCAACAGCCGAGGTACGACTACCCACCGGAGGGCAGCAGCTACGACGAAAATGAC
CAGGAATCCCCAACCCTCCAATACAACAGACACGGATATCCAGATGAAGAATTTTCCGAT
CCTTACCATCAACCTGCATTTGTTCAATACCCACCTGAACCCCACCAACCACCCCGTAGA
ACAGACAGCTTACCACAATATGAACCCAAATATACTGAAATTGATCATGGCAACTATAAA
AAGGGCACAGGCCAACGAAGACCACAATATGAAGAGCCAGTGGAGTACGCACAGATCAGA
CATGGGTATTCACACGTTGTATAAACTTAAGCATTTGCTATATAAAAATAGTGCTACACG
CTAACTGAAACTTTGTGCAGAACTTTTAGTAAACCACATATAAATGCACTTGGTCTAAAG
ATTTTCTGTTTAGTTTAAAAAAAGAAACAGAAAACACATACGGAAAACATCATTTTTCAT
TACAACAGCAAGTCTCAACAGCTATATCAGATTAGCTTTGAAACTTTTTCTAACTTTGTT
TTATAAAAACTGTACCAAACAAATTGTATTCATATATTTTCTTCCAACTGTACGTTGCTT
TTATGTTTTTCAAACTACATATCAAAGTGACAGGTGCTACCCTAATGACATTATTATAGT
TTCTGATGGTACTATCATGGTTTCTGTTAACTTCATTATGTTTTTTTACAATGTGATTAA
AGTTTTTATGATATCATGATTTTTTACCGTAGTAACTGGTTTAATACTTTCATACAATGC
TGCAGACCTAGAAGCAGCTGAGCTTAATTTTTAGCAGTTCAGATACCTTTACCAAAGCCA
CCAGCTTTGCATTTCTGCCTTGCTCAAATGTTGTAGGTTCTAGGTTTCTCTCAAAACGTT
TTAATAATCTAGTCGCACATTTGGAACTACGATTTTTGTGTAAATAACAATTTGTGTTGA
TCAAGTTTGCTTTGTATATGTTTTTATCT
| Gene3D |
Ig-like_fold (IPR013783) - T[21-129] 3.3E-7 - T[142-239] 8.9E-16 - T[240-323] 1.0E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[21-115] 1.76E-5 - T[156-236] 6.5E-7 - T[238-310] 1.9E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[132-233] 9.246 - T[236-312] 9.047 |
| Pfam |
CD80_C2-set (IPR013162) - T[151-219] 3.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|