- Region 'REG00000407' >
- Transcript 'KH2012:KH.S775.5.v1....' >
- Transcript 'Boleac.CG.SB_v3.S404...' >
- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C10.59.v3....'
Transcript Model
Transcript Id
KH2012:KH.C10.59.v3.A.nonSL2-2
Possible name(s)
CADM4; NECTIN1; NECTIN3
Gene model
Location
KhC10 [2,528,645 / 2,544,769]
Amino acid sequence
Length: 616
>KH.C10.59.v3.A.nonSL2-2
ITMILRRIFIPRILKAALLLGCFCCYGVHGTNVIQGESAFIPCYNPETASQFPNMLVILE
FQPTPTAPQQLVSHYQPAQLKDPVVFATGSRYRGRLQFMNTGQLEIKFISLPDEGTFTCT
AQVYSLAPSKIITSVIVYVAPQFEVRKVNDPLLISDGGTMVNAAECIASNGKPPAVVFWG
TNRHLDFDQTATNSSTTPLLTTAVSTLHVEPTKFYNKQSFYCEMRHPSIPNSKRETIYLN
VTYPPETPTITVTADGLSLTCISHANPPATISWLLPASAPSRTFMGPTVSMMSPNTAERS
NDTYTCTANNGIGVAVQSTITAGEASAVIVVTKESNVGIMVGAIIGSLVVLAIIIALIYF
FIIKPAREKDTGPYDQTIQPFKADSRQSSGRFESTSRSRPLIEHANESLNQNRPPSPNQP
PPEDVPDSGSSDSDSSEGNHDVDFDVDPSTNLVDRPGEPAGITSRASVNFQPYWRNSISE
ARRKRPSTSPASRRSRIEPKQEESPSPAPRQQQPRYDYPPEGSSYDENDQESPTLQYNRH
GYPDEEFSDPYHQPAFVQYPPEPHQPPRRTDSLPQYEPKYTEIDHGNYKKGTGQRRPQYE
EPVEYAQIRHGYSHVV
Nucleotide sequence
Length: 2,267
>KH2012:KH.C10.59.v3.A.nonSL2-2
AAAAGTAAATAACCATGATTTTAAGGCGGATATTTATTCCAAGAATACTCAAAGCAGCGC
TTCTGTTGGGTTGTTTTTGTTGCTATGGAGTGCATGGAACTAATGTAATACAGGGTGAGT
CGGCTTTCATCCCATGTTACAACCCTGAAACTGCCTCACAGTTTCCGAACATGTTGGTTA
TATTAGAATTTCAACCAACACCAACTGCTCCTCAGCAGCTAGTTAGCCATTACCAGCCTG
CTCAGCTCAAAGACCCAGTTGTGTTTGCGACTGGTAGTCGATATAGAGGACGCCTACAAT
TCATGAACACTGGTCAGCTTGAGATTAAATTCATCAGCTTACCTGACGAGGGAACTTTCA
CATGCACAGCACAAGTATACTCACTTGCACCAAGCAAGATTATAACATCTGTCATTGTTT
ATGTTGCCCCTCAGTTTGAGGTTAGAAAAGTAAATGATCCTCTACTAATTAGTGATGGTG
GCACGATGGTCAATGCTGCAGAATGCATTGCTAGTAATGGTAAGCCACCAGCTGTGGTTT
TCTGGGGCACAAACCGTCACCTAGATTTCGACCAAACTGCTACAAACAGCAGCACAACAC
CCCTTCTCACAACTGCAGTGTCTACACTTCATGTTGAACCAACCAAATTCTACAACAAAC
AATCCTTCTACTGTGAGATGAGACATCCCTCCATTCCCAACAGCAAGCGAGAAACCATAT
ACCTTAATGTTACTTACCCTCCAGAAACCCCCACCATCACAGTAACTGCTGATGGCTTGA
GTCTTACATGTATTTCCCATGCTAACCCTCCGGCAACTATATCATGGTTGTTGCCAGCGT
CGGCACCTTCGCGCACTTTTATGGGTCCAACTGTGTCCATGATGTCACCGAACACGGCCG
AGCGCTCCAACGACACATACACTTGCACAGCAAATAATGGAATAGGAGTAGCAGTACAGA
GCACCATTACTGCTGGGGAGGCATCAGCTGTCATTGTTGTGACAAAAGAAAGCAATGTTG
GAATAATGGTTGGAGCAATCATTGGAAGTTTGGTTGTCCTTGCGATCATTATTGCTCTCA
TCTACTTCTTCATCATAAAACCTGCCAGAGAAAAAGATACAGGGCCCTATGACCAAACTA
TACAACCTTTTAAAGCAGACAGCCGACAATCGAGTGGTCGATTTGAATCCACTTCAAGGT
CGCGACCTTTAATCGAACACGCGAACGAGAGCTTAAACCAAAACCGACCCCCTAGTCCCA
ACCAACCTCCACCTGAAGATGTTCCCGATAGTGGCAGCAGTGACTCTGATTCAAGCGAGG
GCAACCATGATGTAGATTTTGATGTTGATCCTTCAACAAACTTGGTGGATCGACCAGGAG
AACCAGCCGGCATCACCAGCAGGGCATCTGTCAATTTCCAGCCTTACTGGAGAAATTCTA
TCTCTGAGGCGCGCCGCAAGCGACCCAGCACCTCCCCAGCCTCCCGTCGAAGCCGTATTG
AACCCAAACAAGAAGAATCTCCGTCCCCCGCCCCACGTCAGCAACAGCCGAGGTACGACT
ACCCACCGGAGGGCAGCAGCTACGACGAAAATGACCAGGAATCCCCAACCCTCCAATACA
ACAGACACGGATATCCAGATGAAGAATTTTCCGATCCTTACCATCAACCTGCATTTGTTC
AATACCCACCTGAACCCCACCAACCACCCCGTAGAACAGACAGCTTACCACAATATGAAC
CCAAATATACTGAAATTGATCATGGCAACTATAAAAAGGGCACAGGCCAACGAAGACCAC
AATATGAAGAGCCAGTGGAGTACGCACAGATCAGACATGGGTATTCACACGTTGTATAAA
CTCTAGCATATGCTATATAAAAATAGTGCTACACGCTAACTAAAACTTTGTGCAGAACTT
TTAGTAAACCACATATAAATGCACTTGGTCTAAAGATTTTCTGTTTAATTTAAAAAAAGA
AACAGAAAACACATACGGAAAACATCATTTTTTTATTACAACAGCAAGTCTCAACAGCTA
TATCAGATTAGCTTTTTCTAACTTTGTTTTATAAAAACTGTACCAAACAAACTGTATTCA
TATATTTTCTTCCAACTGTACGGTGCTTTTATGTTTTTCAAACTACATATCAAAGTGACA
GGTGCTACCCTAATGACATTATTATAGTTTCTGATGGTACTATCATGGTCTCTGTTAACT
TCATTATGTTTTTTTTACAATGTGATTAAAGTTTTTATGATACAGTA
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[30-124] 1.81E-5 - T[165-245] 6.79E-7 - T[236-319] 1.97E-7 |
| Gene3D |
Ig-like_fold (IPR013783) - T[30-138] 3.3E-7 - T[151-248] 9.1E-16 - T[249-332] 1.0E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[141-242] 9.246 - T[245-321] 9.047 |
| Pfam |
CD80_C2-set (IPR013162) - T[160-228] 3.2E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|