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  1. Transcript 'KH2012:KH.C14.408.v1...'
  2. Transcript 'KH2012:KH.C10.59.v2....'

Transcript Model

Transcript Id

KH2012:KH.C10.59.v2.A.nonSL3-2

Possible name(s)

CADM4; NECTIN1; NECTIN3

Location

KhC10 [2,528,645 / 2,544,734]

Sequences

Amino acid sequence

Length: 598

>KH.C10.59.v2.A.nonSL3-2
IPRILKAALLLGCFCCYGVHGTNVIQGESAFIPCYNPETASQFPNMLVILEFQPTPTAPQ
QLVSHYQPAQLKDPVVFATGSRYRGRLQFMNTGQLEIKFISLPDEGTFTCTAQVYSLAPS
KIITSVIVYVAPQFEVRKVNDPLLISDGGTMVNAAECIASNGKPPAVVFWGTNRHLDFDQ
TATNSSTTPLLTTAVSTLHVEPTKFYNKQSFYCEMRHPSIPNSKRETIYLNVTYPPETPT
ITVTADGLSLTCISHANPPATISWLLPASAPSRTFMGPTVSMMSPNTAERSNDTYTCTAN
NGIGVAVQSTITAGEASAVIVVTKESNVGIMVGAIIGSLVVLAIIIALIYFFIIKPAREK
DTGPYDQTIQPFKADSRQSSGRFESTSRSRPLIEHANESLNQNRPPSPNQPPPEDVPDSG
SSDSDSSEGNHDVDFDVDPSTNLVDRPGEPAGITSRASVNFQARRKRPSTSPASRRSRIE
PKQEESPSPAPRQQQPRYDYPPEGSSYDENDQESPTLQYNRHGYPDEEFSDPYHQPAFVQ
YPPEPHQPPRRTDSLPQYEPKYTEIDHGNYKKGTGQRRPQYEEPVEYAQIRHGYSHVV

Nucleotide sequence

Length: 2,205

>KH2012:KH.C10.59.v2.A.nonSL3-2
ATTCCAAGAATACTCAAAGCAGCGCTTCTGTTGGGTTGTTTTTGTTGCTATGGAGTGCAT
GGAACTAATGTAATACAGGGTGAGTCGGCTTTCATCCCATGTTACAACCCTGAAACTGCC
TCACAGTTTCCGAACATGTTGGTTATATTAGAATTTCAACCAACACCAACTGCTCCTCAG
CAGCTAGTTAGCCATTACCAGCCTGCTCAGCTCAAAGACCCAGTTGTGTTTGCGACTGGT
AGTCGATATAGAGGACGCCTACAATTCATGAACACTGGTCAGCTTGAGATTAAATTCATC
AGCTTACCTGACGAGGGAACTTTCACATGCACAGCACAAGTATACTCACTTGCACCAAGC
AAGATTATAACATCTGTCATTGTTTATGTTGCCCCTCAGTTTGAGGTTAGAAAAGTAAAT
GATCCTCTACTAATTAGTGATGGTGGCACGATGGTCAATGCTGCAGAATGCATTGCTAGT
AATGGTAAGCCACCAGCTGTGGTTTTCTGGGGCACAAACCGTCACCTAGATTTCGACCAA
ACTGCTACAAACAGCAGCACAACACCCCTTCTCACAACTGCAGTGTCTACACTTCATGTT
GAACCAACCAAATTCTACAACAAACAATCCTTCTACTGTGAGATGAGACATCCCTCCATT
CCCAACAGCAAGCGAGAAACCATATACCTTAATGTTACTTACCCTCCAGAAACCCCCACC
ATCACAGTAACTGCTGATGGCTTGAGTCTTACATGTATTTCCCATGCTAACCCTCCGGCA
ACTATATCATGGTTGTTGCCAGCGTCGGCACCTTCGCGCACTTTTATGGGTCCAACTGTG
TCCATGATGTCACCGAACACGGCCGAGCGCTCCAACGACACATACACTTGCACAGCAAAT
AATGGAATAGGAGTAGCAGTACAGAGCACCATTACTGCTGGGGAGGCATCAGCTGTCATT
GTTGTGACAAAAGAAAGCAATGTTGGAATAATGGTTGGAGCAATCATTGGAAGTTTGGTT
GTCCTTGCGATCATTATTGCTCTCATCTACTTCTTCATCATAAAACCTGCCAGAGAAAAA
GATACAGGGCCCTATGACCAAACTATACAACCTTTTAAAGCAGACAGCCGACAATCGAGT
GGTCGATTTGAATCCACTTCAAGGTCGCGACCTTTAATCGAACACGCGAACGAGAGCTTA
AACCAAAACCGACCCCCTAGTCCCAACCAACCTCCACCTGAAGATGTTCCCGATAGTGGC
AGCAGTGACTCTGATTCAAGCGAGGGCAACCATGATGTAGATTTTGATGTTGATCCTTCA
ACAAACTTGGTGGATCGACCAGGAGAACCAGCCGGCATCACCAGCAGGGCATCTGTCAAT
TTCCAGGCGCGCCGCAAGCGACCCAGCACCTCCCCAGCCTCCCGTCGAAGCCGTATTGAA
CCCAAACAAGAAGAATCTCCGTCCCCCGCCCCACGTCAGCAACAGCCGAGGTACGACTAC
CCACCGGAGGGCAGCAGCTACGACGAAAATGACCAGGAATCCCCAACCCTCCAATACAAC
AGACACGGATATCCAGATGAAGAATTTTCCGATCCTTACCATCAACCTGCATTTGTTCAA
TACCCACCTGAACCCCACCAACCACCCCGTAGAACAGACAGCTTACCACAATATGAACCC
AAATATACTGAAATTGATCATGGCAACTATAAAAAGGGCACAGGCCAACGAAGACCACAA
TATGAAGAGCCAGTGGAGTACGCACAGATCAGACATGGGTATTCACACGTTGTATAAACT
CTAGCATATGCTATATAAAAATAGTGCTACACGCTAACTAAAACTTTGTGCAGAACTTTT
AGTAAACCACATATAAATGCACTTGGTCTAAAGATTTTCTGTTTAATTTAAAAAAAGAAA
CAGAAAACACATACGGAAAACATCATTTTTTTATTACAACAGCAAGTCTCAACAGCTATA
TCAGATTAGCTTTTTCTAACTTTGTTTTATAAAAACTGTACCAAACAAACTGTATTCATA
TATTTTCTTCCAACTGTACGGTGCTTTTATGTTTTTCAAACTACATATCAAAGTGACAGG
TGCTACCCTAATGACATTATTATAGTTTCTGATGGTACTATCATGGTCTCTGTTAACTTC
ATTATGTTTTTTTTACAATGTGATTAAAGTTTTTATGATACAGTA

InterProScan

SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[21-115] 1.7E-5 - T[156-236] 6.46E-7 - T[238-310] 1.84E-7
Gene3D
Ig-like_fold (IPR013783) - T[21-129] 3.2E-7 - T[142-234] 9.0E-16 - T[235-313] 5.8E-8
ProSiteProfiles
Ig-like_dom (IPR007110) - T[132-233] 9.246 - T[236-312] 9.047
Pfam
CD80_C2-set (IPR013162) - T[151-219] 3.0E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value