- Transcript 'KH2012:KH.C1.1192.v1...' >
- Transcript 'Harore.CG.MTP2014.S8...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Region 'REG00001179' >
- Transcript 'KH2012:KH.C10.59.v1....'
Transcript Model
Transcript Id
KH2012:KH.C10.59.v1.A.nonSL4-1
Possible name(s)
CADM4; NECTIN1; NECTIN3
Gene model
Location
KhC10 [2,527,624 / 2,544,736]
Amino acid sequence
Length: 598
>KH.C10.59.v1.A.nonSL4-1
IPRILKAALLLGCFCCYGVHGTNVIQGESAFIPCYNPETASQFPNMLVILEFQPTPTAPQ
QLVSHYQPAQLKDPVVFATGSRYRGRLQFMNTGQLEIKFISLPDEGTFTCTAQVYSLAPS
KIITSVIVYVAPQFEVRKVNDPLLISDGGTMVNAAECIASNGKPPAVVFWGTNRHLDFDQ
TATNSSTTPLLTTAVSTLHVEPTKFYNKQSFYCEMRHPSIPNSKRETIYLNVTYPPETPT
ITVTADGLSLTCISHANPPATISWLLPASAPSRTFMGPTVSMMSPNTAERSNDTYTCTAN
NGIGVAVQSTITAGEASAVIVVTKESNVGIMVGAIIGSLVVLAIIIALIYFFIIKPAREK
DTGPYDQTIQPFKADSRQSSGRFESTSRSRPLIEHANESLNQNRPPSPNQPPPEDVPDSG
SSDSDSSEGNHDVDFDVDPSTNLVDRPGEPAGITSRASVNFQARRKRPSTSPASRRSRIE
PKQEESPSPAPRQQQPRYDYPPEGSSYDENDQESPTLQYNRHGYPDEEFSDPYHQPAFVQ
YPPEPHQPPRRTDSLPQYEPKYTEIDHGNYKKGTGQRRPQYEEPVEYAQIRHGYSHVV
Nucleotide sequence
Length: 2,464
>KH2012:KH.C10.59.v1.A.nonSL4-1
TTATTCCAAGAATACTCAAAGCAGCGCTTCTGTTGGGTTGTTTTTGTTGCTATGGAGTGC
ATGGAACTAATGTAATACAGGGTGAGTCGGCTTTCATCCCATGTTACAACCCTGAAACTG
CCTCACAGTTTCCGAACATGTTGGTTATATTAGAATTTCAACCAACACCAACTGCTCCTC
AGCAGCTAGTTAGCCATTACCAGCCTGCTCAGCTCAAAGACCCAGTTGTGTTTGCGACTG
GTAGTCGATATAGAGGACGCCTACAATTCATGAACACTGGTCAGCTTGAGATTAAATTCA
TCAGCTTACCTGACGAGGGAACTTTCACATGCACAGCACAAGTATACTCACTTGCACCAA
GCAAGATTATAACATCTGTCATTGTTTATGTTGCCCCTCAGTTTGAGGTTAGAAAAGTAA
ATGATCCTCTACTAATTAGTGATGGTGGCACGATGGTCAATGCTGCAGAATGCATTGCTA
GTAATGGTAAGCCACCAGCTGTGGTTTTCTGGGGCACAAACCGTCACCTAGATTTCGACC
AAACTGCTACAAACAGCAGCACAACACCCCTTCTCACAACTGCAGTGTCTACACTTCATG
TTGAACCAACCAAATTCTACAACAAACAATCCTTCTACTGTGAGATGAGACATCCCTCCA
TTCCCAACAGCAAGCGAGAAACCATATACCTTAATGTTACTTACCCTCCAGAAACCCCCA
CCATCACAGTAACTGCTGATGGCTTGAGTCTTACATGTATTTCCCATGCTAACCCTCCGG
CAACTATATCATGGTTGTTGCCAGCGTCGGCACCTTCGCGCACTTTTATGGGTCCAACTG
TGTCCATGATGTCACCGAACACGGCCGAGCGCTCCAACGACACATACACTTGCACAGCAA
ATAATGGAATAGGAGTAGCAGTACAGAGCACCATTACTGCTGGGGAGGCATCAGCTGTCA
TTGTTGTGACAAAAGAAAGCAATGTTGGAATAATGGTTGGAGCAATCATTGGAAGTTTGG
TTGTCCTTGCGATCATTATTGCTCTCATCTACTTCTTCATCATAAAACCTGCCAGAGAAA
AAGATACAGGGCCCTATGACCAAACTATACAACCTTTTAAAGCAGACAGCCGACAATCGA
GTGGTCGATTTGAATCCACTTCAAGGTCGCGACCTTTAATCGAACACGCGAACGAGAGCT
TAAACCAAAACCGACCCCCTAGTCCCAACCAACCTCCACCTGAAGATGTTCCCGATAGTG
GCAGCAGTGACTCTGATTCAAGCGAGGGCAACCATGATGTAGATTTTGATGTTGATCCTT
CAACAAACTTGGTGGATCGACCAGGAGAACCAGCCGGCATCACCAGCAGGGCATCTGTCA
ATTTCCAGGCGCGCCGCAAGCGACCCAGCACCTCCCCAGCCTCCCGTCGAAGCCGTATTG
AACCCAAACAAGAAGAATCTCCGTCCCCCGCCCCACGTCAGCAACAGCCGAGGTACGACT
ACCCACCGGAGGGCAGCAGCTACGACGAAAATGACCAGGAATCCCCAACCCTCCAATACA
ACAGACACGGATATCCAGATGAAGAATTTTCCGATCCTTACCATCAACCTGCATTTGTTC
AATACCCACCTGAACCCCACCAACCACCCCGTAGAACAGACAGCTTACCACAATATGAAC
CCAAATATACTGAAATTGATCATGGCAACTATAAAAAGGGCACAGGCCAACGAAGACCAC
AATATGAAGAGCCAGTGGAGTACGCACAGATCAGACATGGGTATTCACACGTTGTATAAA
CTTAAGCATTTGCTATATAAAAATAGTGCTACACGCTAACTGAAACTTTGTGCAGAACTT
TTAGTAAACCACATATAAATGCACTTGGTCTAAAGATTTTCTGTTTAGTTTAAAAAAAGA
AACAGAAAACACATACGGAAAACATCATTTTTCATTACAACAGCAAGTCTCAACAGCTAT
ATCAGATTAGCTTTGAAACTTTTTCTAACTTTGTTTTATAAAAACTGTACCAAACAAATT
GTATTCATATATTTTCTTCCAACTGTACGTTGCTTTTATGTTTTTCAAACTACATATCAA
AGTGACAGGTGCTACCCTAATGACATTATTATAGTTTCTGATGGTACTATCATGGTTTCT
GTTAACTTCATTATGTTTTTTTACAATGTGATTAAAGTTTTTATGATATCATGATTTTTT
ACCGTAGTAACTGGTTTAATACTTTCATACAATGCTGCAGACCTAGAAGCAGCTGAGCTT
AATTTTTAGCAGTTCAGATACCTTTACCAAAGCCACCAGCTTTGCATTTCTGCCTTGCTC
AAATGTTGTAGGTTCTAGGTTTCTCTCAAAACGTTTTAATAATCTAGTCGCACATTTGGA
ACTACGATTTTTGTGTAAATAACAATTTGTGTTGATCAAGTTTGCTTTGTATATGTTTTT
ATCT
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[21-115] 1.7E-5 - T[156-236] 6.46E-7 - T[238-310] 1.84E-7 |
| Gene3D |
Ig-like_fold (IPR013783) - T[21-129] 3.2E-7 - T[142-234] 9.0E-16 - T[235-313] 5.8E-8 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[132-233] 9.246 - T[236-312] 9.047 |
| Pfam |
CD80_C2-set (IPR013162) - T[151-219] 3.0E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|