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  1. Transcript 'KH2012:KH.L87.32.v2....'
  2. Transcript 'Phmamm.CG.MTP2014.S2...'
  3. Transcript 'KH2012:KH.C10.59.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.59.v1.A.nonSL2-1

Possible name(s)

CADM4; NECTIN1; NECTIN3

Location

KhC10 [2,527,624 / 2,544,769]

Sequences

Amino acid sequence

Length: 607

>KH.C10.59.v1.A.nonSL2-1
ITMILRRIFIPRILKAALLLGCFCCYGVHGTNVIQGESAFIPCYNPETASQFPNMLVILE
FQPTPTAPQQLVSHYQPAQLKDPVVFATGSRYRGRLQFMNTGQLEIKFISLPDEGTFTCT
AQVYSLAPSKIITSVIVYVAPQFEVRKVNDPLLISDGGTMVNAAECIASNGKPPAVVFWG
TNRHLDFDQTATNSSTTPLLTTAVSTLHVEPTKFYNKQSFYCEMRHPSIPNSKRETIYLN
VTYPPETPTITVTADGLSLTCISHANPPATISWLLPASAPSRTFMGPTVSMMSPNTAERS
NDTYTCTANNGIGVAVQSTITAGEASAVIVVTKESNVGIMVGAIIGSLVVLAIIIALIYF
FIIKPAREKDTGPYDQTIQPFKADSRQSSGRFESTSRSRPLIEHANESLNQNRPPSPNQP
PPEDVPDSGSSDSDSSEGNHDVDFDVDPSTNLVDRPGEPAGITSRASVNFQARRKRPSTS
PASRRSRIEPKQEESPSPAPRQQQPRYDYPPEGSSYDENDQESPTLQYNRHGYPDEEFSD
PYHQPAFVQYPPEPHQPPRRTDSLPQYEPKYTEIDHGNYKKGTGQRRPQYEEPVEYAQIR
HGYSHVV

Nucleotide sequence

Length: 2,497

>KH2012:KH.C10.59.v1.A.nonSL2-1
AAAAGTAAATAACCATGATTTTAAGGCGGATATTTATTCCAAGAATACTCAAAGCAGCGC
TTCTGTTGGGTTGTTTTTGTTGCTATGGAGTGCATGGAACTAATGTAATACAGGGTGAGT
CGGCTTTCATCCCATGTTACAACCCTGAAACTGCCTCACAGTTTCCGAACATGTTGGTTA
TATTAGAATTTCAACCAACACCAACTGCTCCTCAGCAGCTAGTTAGCCATTACCAGCCTG
CTCAGCTCAAAGACCCAGTTGTGTTTGCGACTGGTAGTCGATATAGAGGACGCCTACAAT
TCATGAACACTGGTCAGCTTGAGATTAAATTCATCAGCTTACCTGACGAGGGAACTTTCA
CATGCACAGCACAAGTATACTCACTTGCACCAAGCAAGATTATAACATCTGTCATTGTTT
ATGTTGCCCCTCAGTTTGAGGTTAGAAAAGTAAATGATCCTCTACTAATTAGTGATGGTG
GCACGATGGTCAATGCTGCAGAATGCATTGCTAGTAATGGTAAGCCACCAGCTGTGGTTT
TCTGGGGCACAAACCGTCACCTAGATTTCGACCAAACTGCTACAAACAGCAGCACAACAC
CCCTTCTCACAACTGCAGTGTCTACACTTCATGTTGAACCAACCAAATTCTACAACAAAC
AATCCTTCTACTGTGAGATGAGACATCCCTCCATTCCCAACAGCAAGCGAGAAACCATAT
ACCTTAATGTTACTTACCCTCCAGAAACCCCCACCATCACAGTAACTGCTGATGGCTTGA
GTCTTACATGTATTTCCCATGCTAACCCTCCGGCAACTATATCATGGTTGTTGCCAGCGT
CGGCACCTTCGCGCACTTTTATGGGTCCAACTGTGTCCATGATGTCACCGAACACGGCCG
AGCGCTCCAACGACACATACACTTGCACAGCAAATAATGGAATAGGAGTAGCAGTACAGA
GCACCATTACTGCTGGGGAGGCATCAGCTGTCATTGTTGTGACAAAAGAAAGCAATGTTG
GAATAATGGTTGGAGCAATCATTGGAAGTTTGGTTGTCCTTGCGATCATTATTGCTCTCA
TCTACTTCTTCATCATAAAACCTGCCAGAGAAAAAGATACAGGGCCCTATGACCAAACTA
TACAACCTTTTAAAGCAGACAGCCGACAATCGAGTGGTCGATTTGAATCCACTTCAAGGT
CGCGACCTTTAATCGAACACGCGAACGAGAGCTTAAACCAAAACCGACCCCCTAGTCCCA
ACCAACCTCCACCTGAAGATGTTCCCGATAGTGGCAGCAGTGACTCTGATTCAAGCGAGG
GCAACCATGATGTAGATTTTGATGTTGATCCTTCAACAAACTTGGTGGATCGACCAGGAG
AACCAGCCGGCATCACCAGCAGGGCATCTGTCAATTTCCAGGCGCGCCGCAAGCGACCCA
GCACCTCCCCAGCCTCCCGTCGAAGCCGTATTGAACCCAAACAAGAAGAATCTCCGTCCC
CCGCCCCACGTCAGCAACAGCCGAGGTACGACTACCCACCGGAGGGCAGCAGCTACGACG
AAAATGACCAGGAATCCCCAACCCTCCAATACAACAGACACGGATATCCAGATGAAGAAT
TTTCCGATCCTTACCATCAACCTGCATTTGTTCAATACCCACCTGAACCCCACCAACCAC
CCCGTAGAACAGACAGCTTACCACAATATGAACCCAAATATACTGAAATTGATCATGGCA
ACTATAAAAAGGGCACAGGCCAACGAAGACCACAATATGAAGAGCCAGTGGAGTACGCAC
AGATCAGACATGGGTATTCACACGTTGTATAAACTTAAGCATTTGCTATATAAAAATAGT
GCTACACGCTAACTGAAACTTTGTGCAGAACTTTTAGTAAACCACATATAAATGCACTTG
GTCTAAAGATTTTCTGTTTAGTTTAAAAAAAGAAACAGAAAACACATACGGAAAACATCA
TTTTTCATTACAACAGCAAGTCTCAACAGCTATATCAGATTAGCTTTGAAACTTTTTCTA
ACTTTGTTTTATAAAAACTGTACCAAACAAATTGTATTCATATATTTTCTTCCAACTGTA
CGTTGCTTTTATGTTTTTCAAACTACATATCAAAGTGACAGGTGCTACCCTAATGACATT
ATTATAGTTTCTGATGGTACTATCATGGTTTCTGTTAACTTCATTATGTTTTTTTACAAT
GTGATTAAAGTTTTTATGATATCATGATTTTTTACCGTAGTAACTGGTTTAATACTTTCA
TACAATGCTGCAGACCTAGAAGCAGCTGAGCTTAATTTTTAGCAGTTCAGATACCTTTAC
CAAAGCCACCAGCTTTGCATTTCTGCCTTGCTCAAATGTTGTAGGTTCTAGGTTTCTCTC
AAAACGTTTTAATAATCTAGTCGCACATTTGGAACTACGATTTTTGTGTAAATAACAATT
TGTGTTGATCAAGTTTGCTTTGTATATGTTTTTATCT

InterProScan

SUPERFAMILY
Ig-like_dom_sf (IPR036179) - T[30-124] 1.76E-5 - T[165-245] 6.5E-7 - T[247-319] 1.9E-7
Gene3D
Ig-like_fold (IPR013783) - T[30-138] 3.3E-7 - T[151-248] 8.9E-16 - T[249-332] 1.0E-7
ProSiteProfiles
Ig-like_dom (IPR007110) - T[141-242] 9.246 - T[245-321] 9.047
Pfam
CD80_C2-set (IPR013162) - T[160-228] 3.1E-9

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value