- Transcript 'KH2012:KH.C10.574.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.574.v1.A.ND1-1
Possible name(s)
ZBTB24; ZNF226; ZNF441
Gene model
Location
KhC10 [1,827,524 / 1,832,053]
Amino acid sequence
Length: 704
>KH.C10.574.v1.A.ND1-1
SQLTRQVVTVYTKITHIMSRRKQSNPQHVHNHDDDFIETHKSKKTKYMTRLQDESPKDQH
LESAPTTNTNELDYKYSDSSQSSGEPGSPLPNRINVERKFGCSRCGVAFLQRSSLEVHQE
NYCTGQRYKLECKICGAKFSDKDMFEMHMEVHSWKFTCHLCQTQYETQESYDRHFAVHVT
KPNGSCKICTYKSLSPEDMTKHLKVHRNYSGNHFPTDCKNASQGKVKEDLPCATEREETG
DACVQSSKAITKVKPPEKSNEPKEGSFTCIVCSVCFDEVDSLQQHLLNVHASNQPKKAVM
KPKEASIPNFRRHSIAVNRIEPEISSSPHHSAVGIKRKFSDVEQRNIPARRNDMFLKFAQ
ENSSRNEGVLMGRPIIRYPGTNNHVSPERYRCTDCDISFESLNNFRVHKKYYCSERRVIM
KESEINRANKNPAKKKRASKAGSQEGESMHHEPDEDKQTSPESSVKSTKETEQRPLRKTP
ARHSRKVKKYECKECSIRFSKFDTYLAHKKYYCESRRSEKSTGKHPHVIPHDKSSESSSD
ADTHPVDRSNLRRNSLGTNRSPFQEPLRHDLLPDFPFPYPDIHMMLGDPNQVSALLTPLV
KLYISSMKYNMLQSERKVGNRRVPNLDNDSVTRDDAAGHSPRARSDNPSVKLRPIKTEKN
EDELVRSAAPTETSRAENVHSLKTLNPSIIQFPVSIKQEAVTTI
Nucleotide sequence
Length: 2,831
>KH2012:KH.C10.574.v1.A.ND1-1
ACCGAAGCTCCAAAGCTCTTGTGTTCAGTTAAACTCTGATAGTGAATAAGCTTCGTGTAT
TGTACCGACCCATTGTCAATCATGCAAACTTGATATTATATTGACAAGAGAAGAAGGCAG
TTTAAATTAAAACTCTAAAGTAGAGAGACATTAATCTCAGCTGACAAGGCAGGTGGTCAC
AGTCTATACAAAAATAACACACATAATGTCCCGTAGAAAGCAAAGTAATCCACAACACGT
ACATAACCACGATGATGATTTCATTGAAACGCATAAAAGCAAAAAAACAAAATACATGAC
CCGATTACAAGATGAAAGTCCTAAAGATCAACATTTGGAAAGTGCACCAACAACAAATAC
AAACGAACTTGACTACAAATACTCAGATTCGAGTCAATCCTCGGGTGAACCAGGATCCCC
TCTGCCGAACAGAATAAATGTTGAGAGAAAGTTTGGTTGCAGCAGATGTGGTGTTGCTTT
TCTACAGAGGAGCTCACTTGAGGTACACCAGGAGAACTACTGCACTGGTCAGCGTTACAA
GTTGGAATGCAAGATATGCGGAGCCAAATTTTCCGATAAAGACATGTTCGAGATGCACAT
GGAAGTACATTCGTGGAAATTTACTTGTCACCTATGCCAGACGCAATATGAGACCCAAGA
GTCCTATGATAGACACTTCGCAGTGCATGTAACGAAACCAAATGGATCGTGCAAAATTTG
TACTTACAAGTCACTTTCGCCAGAAGATATGACAAAGCATTTGAAAGTACATCGGAATTA
TTCTGGTAATCATTTTCCAACTGACTGTAAAAATGCTAGTCAAGGAAAAGTAAAAGAAGA
CTTACCATGTGCAACGGAGCGCGAAGAAACTGGAGACGCATGTGTGCAGAGTAGTAAGGC
GATAACGAAGGTAAAACCACCTGAAAAATCGAATGAACCTAAAGAGGGTAGTTTTACATG
CATTGTGTGTTCTGTATGTTTTGACGAGGTCGACTCGCTGCAGCAGCACTTACTAAATGT
ACATGCGTCTAACCAACCAAAGAAAGCTGTAATGAAACCTAAAGAAGCATCCATTCCGAA
CTTTCGTCGCCACAGCATTGCAGTGAACCGGATAGAACCAGAAATATCATCGAGCCCACA
TCATTCTGCTGTTGGGATAAAGCGCAAGTTTTCGGATGTTGAACAAAGAAATATTCCTGC
TCGACGCAATGATATGTTTCTAAAGTTTGCTCAAGAAAACTCCTCTCGTAATGAAGGGGT
GCTAATGGGGAGACCTATCATACGTTACCCGGGAACAAACAACCACGTCTCACCTGAAAG
ATATCGTTGCACAGATTGTGATATCAGCTTTGAGAGTTTAAACAATTTCAGAGTGCATAA
AAAGTATTATTGTTCCGAAAGACGGGTAATAATGAAAGAAAGCGAAATTAACAGGGCAAA
TAAAAATCCAGCAAAGAAGAAGCGCGCGTCAAAAGCTGGTTCCCAAGAGGGAGAATCAAT
GCATCATGAACCAGACGAAGATAAACAAACATCACCAGAATCCAGTGTGAAGTCGACCAA
GGAAACAGAGCAGCGACCACTTCGCAAAACCCCCGCGCGTCACTCTCGAAAAGTTAAGAA
ATACGAATGCAAGGAATGCAGTATCCGATTTTCCAAGTTTGACACCTACTTGGCCCATAA
GAAGTATTACTGTGAGAGTCGAAGAAGTGAAAAATCGACAGGAAAACATCCCCACGTCAT
ACCACATGACAAAAGCAGCGAATCATCGTCGGACGCTGATACACATCCAGTTGATAGGTC
TAACCTCCGTAGGAATAGCCTTGGGACGAACCGTAGTCCATTCCAGGAGCCTCTTCGTCA
TGATTTGCTTCCCGACTTTCCATTTCCCTATCCTGATATACACATGATGTTGGGTGATCC
AAACCAAGTTTCAGCTCTGCTTACGCCACTTGTAAAGCTTTATATTTCATCCATGAAGTA
CAACATGCTCCAGTCAGAAAGGAAAGTTGGAAATCGTCGAGTCCCAAATTTGGATAACGA
TTCAGTGACCCGAGACGATGCTGCAGGGCATTCACCACGCGCACGAAGCGACAACCCTTC
AGTTAAACTCCGCCCGATTAAAACAGAAAAGAACGAAGACGAACTTGTCCGTTCCGCGGC
TCCAACGGAAACTTCCCGCGCCGAAAACGTTCACTCTTTAAAAACTTTAAACCCCTCTAT
TATTCAATTCCCTGTAAGCATAAAACAAGAAGCTGTGACAACAATATAACTACAACAAGC
TTTATCCAATTTGTTTATATTACGATCCACTGACAAATGAAGCAACTAGTAAACAGATTA
CTAAATACATTGCTTTGAATTATCTCGATCTAATTTCTCGGTCCGTTTGTTGGGTAATGA
ACGTGATACGGCGTTTAGACGATAATGTTTATATACTAGTTATGATAATCAATGATGTAT
ATACTATATATACCACACGGGAATTGCAACATCCTTTATCAAACACAAACAACAACAAAT
ATAAAACTCCAATAAGGAACGAGTAGTTACCGGTATACGTTGTCTGTTACAATCTTAAAC
GAATCTTTCGCGCTTGCGTACTGCAAAACATCAAATGCCTATTTAAGTTTATATCCTGTA
CATAAGCCATACAGACATGACTGTCTGGTAATTATAATGATTGTCTATTAGGTGTACGCA
TGCACCACTACAGTGTGTCAGGTTAAGTATTTACGGTGGCTGCTTTTAGCTTTCCGCTGA
TGTACCAGTGGTTGCGTTTACGTAATTGTGACGTTTCAAAACACGCGTCTATTGATGTCG
TTTACGCTTAA
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[98-152] 1.15E-7 - T[385-416] 4.41E-9 - T[486-516] 1.84E-9 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[100-128] 10.637 - T[130-157] 9.868 - T[267-295] 10.783 |
| SMART |
Znf_C2H2_type (IPR013087) - T[100-120] 140.0 - T[130-152] 0.0025 - T[156-178] 0.47 - T[184-206] 0.54 - T[267-290] 0.059 - T[390-410] 15.0 - T[490-510] 63.0 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[132-152] . - T[158-178] . - T[269-290] . |
| ProSiteProfiles |
ZF_CCHC_FOG (IPR034731) - T[384-417] 23.007 - T[484-517] 24.559 |
| Protein Name | Identity | Bit Score | e-value |
|---|
