- Transcript 'Harore.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.L141.56.v2...' >
- Transcript 'Haaura.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.S910.2.v2....' >
- Transcript 'KH2012:KH.C10.49.v1....'
Transcript Model
Transcript Id
KH2012:KH.C10.49.v1.A.SL1-1
Possible name(s)
BCL3; NFKB1; NFKB2
Gene model
Location
KhC10 [1,785,519 / 1,796,068]
Amino acid sequence
Length: 1,024
>KH.C10.49.v1.A.SL1-1
HKMLSASNKHDLTPKETLFIATECHLASLQDNDGDTPLHISIVRHDTQKSLELIRLFQIS
RKNIDILNRLMQTPLHLAVITSQCEVVDGLLNCAANPNVLDRFGCNVAHIAAKYNSLTCL
QSVFKYSKFPLDIEKINLEGVTALHVAVQNNSINVLKQLLQHGANIDVKDNKSGRSALIY
AIESDNVIIVELLLEQGASVCEQTYSGDTALHIASGRAVQSIIRLLLRKGADATNRNLPN
EDLHFFSPDSQLQTLQMIQAGMTNGDKQNAQLMRSMSCPTTPSEPKSMSHKSIMGKHQLE
NENQDESEISIKRNRLEVLKKEMNSQILGSSGSTISTNKTELNEDSTTDKRSIFPCIKPF
GFSSYSSILPPPPPILSSGRAAYLPPQFYKEELFRKCIQDRNVMKTSVSPFLIIPKQEKD
VSPTTSEAPIPSPTSTCNEYKIENCQSDVRGQIIPKQEGKTSPALTKPTLPIMTQYRRQA
ERSMSLPGSPNPSDEALFQVAREGLAVAAMPSLSTSNSLDFITQANTVPSKIRPARQAEI
KSKTNELQKLALQGLAVAAMKEMKHEIVEKSRGTEYNEIYRRPLEHFISKDGRKSSTSFG
IPSQLQGTARQSPIEPSLLLLAQASVVQPDDASSKREDHQISVETKQSLREVILEKKKSM
EPKIPVSYTTVQTASNQTHISVEIVRPNIPTSLETNVKTENTEDVTVPLQQNESLKSASS
ETSATDDSLQDIRQRLVQLNYEIQHLLSPSSDRPNPADTQQRMSTYSAEYARLCQKAKEL
SKNTMVSAEPVETSAAYSPQKPVNPLYPVASIRPVHQTVFPHSPQLVLHPQLMSPQLPMP
LHYPYMVPNYSVMPGKHYPSPMYYLDYRRQVPTMPTTHLWQNPVTSVPQKSAVVATVKVL
NTHAKKSFKPGQPSSETDEAKLIKPVHQVPNFPQESYALPQSSQTVSMTTAHTTTTSILH
KKPMAAVIAIPKLEVGEDQPLNLSKKEEQPLNLQTSGWNSRMTHTLSTPSAVESASSKMQ
SYYK
Nucleotide sequence
Length: 3,580
>KH2012:KH.C10.49.v1.A.SL1-1
GAATTAGCTACCGTAGCACAAGATGTTATCAGCAAGCAACAAACATGATTTAACTCCGAA
AGAAACTTTGTTTATTGCAACAGAATGTCATCTTGCATCACTCCAAGATAATGATGGTGA
CACGCCTCTTCACATATCTATAGTGAGACACGACACACAGAAAAGCTTGGAACTTATTCG
ATTGTTTCAAATTTCAAGAAAGAACATTGATATTTTAAACCGATTGATGCAAACCCCACT
TCATTTGGCGGTAATTACAAGCCAATGTGAGGTGGTTGATGGTTTATTGAACTGTGCAGC
AAATCCGAATGTATTGGATAGATTTGGTTGCAATGTTGCTCATATTGCTGCAAAATACAA
CTCATTAACATGCCTTCAATCTGTTTTTAAATATTCAAAGTTTCCGTTGGATATCGAAAA
GATCAATTTGGAAGGTGTCACGGCTTTACATGTTGCTGTACAAAACAATTCAATCAATGT
GCTCAAGCAGTTGTTGCAACACGGTGCCAATATAGATGTGAAGGACAACAAAAGTGGACG
CTCAGCGCTTATATATGCAATTGAATCTGACAATGTTATTATTGTGGAGTTATTACTTGA
GCAAGGTGCAAGTGTGTGTGAACAAACATACAGTGGTGATACAGCTCTTCATATTGCAAG
TGGTCGTGCTGTACAAAGTATTATTCGTCTTTTATTAAGAAAAGGAGCAGACGCAACAAA
CCGAAATCTTCCAAATGAGGATCTTCACTTTTTTAGTCCTGATTCTCAGCTTCAGACGTT
GCAGATGATACAAGCTGGTATGACCAATGGAGATAAACAAAATGCACAACTAATGCGAAG
TATGAGTTGTCCAACAACTCCATCTGAACCAAAATCCATGTCACATAAATCAATAATGGG
AAAACATCAACTTGAAAATGAAAATCAAGATGAGAGCGAAATTTCAATCAAGAGAAACAG
ACTTGAAGTCCTTAAAAAAGAAATGAATTCTCAAATTCTTGGTTCATCTGGTTCTACAAT
CTCCACGAATAAAACTGAATTAAACGAGGATTCAACCACAGACAAGCGTTCCATCTTCCC
TTGCATAAAACCATTTGGGTTTTCAAGTTATTCGTCCATCTTACCTCCCCCTCCCCCCAT
CTTATCATCAGGAAGAGCTGCTTATCTTCCCCCACAATTTTATAAAGAAGAATTATTCAG
AAAGTGCATCCAAGATAGAAATGTTATGAAGACGAGTGTTTCTCCGTTCCTTATTATTCC
GAAGCAGGAAAAAGATGTTTCTCCAACAACAAGTGAAGCTCCAATTCCATCTCCAACATC
TACATGTAATGAATATAAAATTGAAAATTGTCAAAGTGATGTTCGTGGTCAGATTATACC
AAAACAAGAAGGTAAAACATCTCCTGCGTTAACTAAGCCCACTCTACCAATCATGACTCA
ATATAGAAGACAAGCTGAGCGTTCCATGTCACTACCTGGAAGTCCAAACCCTTCAGATGA
AGCTTTGTTCCAAGTTGCAAGGGAAGGACTTGCAGTTGCCGCGATGCCTTCGTTGTCAAC
ATCCAACTCTTTAGATTTTATAACTCAAGCCAACACTGTTCCATCGAAAATTCGACCAGC
TAGACAAGCAGAGATAAAATCAAAAACAAATGAACTGCAGAAACTTGCATTGCAAGGGTT
AGCTGTTGCTGCCATGAAAGAAATGAAACATGAAATCGTTGAAAAGTCACGTGGCACCGA
GTATAATGAAATCTACCGACGACCACTTGAACACTTTATTTCTAAAGATGGAAGAAAATC
AAGTACTTCGTTTGGTATTCCTTCACAACTGCAAGGCACAGCAAGACAATCTCCAATTGA
ACCATCACTTCTTCTCCTTGCACAAGCCAGTGTTGTTCAACCAGATGATGCATCAAGCAA
GCGTGAAGATCATCAAATATCAGTTGAAACAAAACAGAGTCTTCGAGAAGTCATTTTGGA
AAAGAAAAAGTCAATGGAACCAAAGATTCCTGTTTCGTACACAACAGTACAAACTGCATC
CAACCAAACACATATTAGTGTTGAGATTGTGAGACCTAATATACCAACATCGCTTGAAAC
CAATGTCAAAACAGAAAACACAGAGGATGTAACGGTTCCACTACAACAAAACGAAAGTTT
AAAATCTGCTTCATCCGAAACTTCTGCAACAGATGATTCCTTGCAAGACATCCGTCAACG
ACTTGTTCAGTTAAATTATGAAATCCAACATTTGTTAAGTCCTTCTTCTGATCGACCTAA
CCCTGCAGATACTCAGCAAAGAATGTCGACTTATTCTGCGGAATATGCACGACTTTGTCA
GAAAGCAAAGGAATTGAGCAAGAACACGATGGTTTCAGCTGAGCCAGTGGAAACATCTGC
AGCTTATTCACCTCAAAAACCAGTAAATCCATTGTATCCAGTTGCGTCTATACGACCGGT
TCATCAGACAGTGTTTCCCCACTCACCACAGTTGGTGTTACATCCTCAACTTATGAGTCC
ACAACTCCCAATGCCATTACATTATCCTTATATGGTACCAAACTATTCAGTAATGCCAGG
TAAACATTACCCATCACCTATGTATTATCTTGATTATAGAAGACAAGTGCCAACCATGCC
TACCACCCATTTGTGGCAAAATCCTGTTACTTCCGTACCTCAAAAATCAGCAGTCGTTGC
TACAGTTAAAGTATTAAACACTCACGCTAAAAAATCTTTCAAACCGGGACAACCAAGTTC
AGAAACTGATGAAGCAAAACTAATTAAACCAGTTCACCAAGTTCCTAACTTTCCACAAGA
AAGCTACGCACTTCCTCAGTCAAGTCAAACTGTATCGATGACCACAGCTCATACCACCAC
AACAAGCATTTTACATAAGAAGCCCATGGCAGCTGTGATTGCCATACCAAAACTAGAGGT
AGGGGAAGATCAACCTTTGAACTTGTCCAAGAAGGAGGAACAACCCCTCAATCTTCAAAC
TTCTGGTTGGAATTCACGGATGACACACACATTATCTACACCGTCTGCTGTTGAAAGTGC
TTCTTCGAAAATGCAATCATACTATAAGTAACAAATTAAAGATATATGTGTGAAATTCAG
TATATGAACCAGATCTTAAAAAGTGTTAAAGGTAACCAAGAACTGCAGAAGTTCAACTCA
ACTGAAACTTCTACTTTTTTTTAAGAATTAGAACGTCTCAACACAATATGGCTGAGTGGC
GTGATGAACAAACTGTTGTTATTGTATAACAGTGTAAAATATGCAATTGCACATCTGATC
AAAAAGCAGATAGATATTTAATGATACAATGTTTATTTATTTATTTTGTAATACATCATA
TATATTTAGTAATAGTAACAGTGGAATGACACTCAATGAAGATGTGATTATCGTTTCGAT
AAAAACACATATAAAATAACAAATTTATGTTTTTTTCTTTTGCCATATTGACATGATACA
GCTATGGTTTGATGATTGTAGCTTTTATATGTAACTGATTTTGTAAAATCCTGTAGTTTA
TGTTATATTAAAGTTTCATAAATTAAATTTGGTTACTTGT
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[27-247] 2.3E-54 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[29-121] 9.01533E-17 - T[65-227] 3.31308E-32 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[33-238] 48.172 |
| SMART |
Ankyrin_rpt (IPR002110) - T[33-66] 2.5 - T[70-99] 0.39 - T[103-135] 550.0 - T[139-168] 5.3E-7 - T[173-202] 0.0078 - T[206-235] 0.2 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[33-245] 8.64E-57 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[70-102] 10.286 - T[139-171] 15.173 - T[173-205] 9.885 - T[206-238] 11.808 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[75-170] 1.2E-11 - T[172-236] 2.2E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NFKB1_HUMAN | 40.686 % | 146 | 1.21E-35 |
| NFKB2_HUMAN | 32.34 % | 128 | 5.17E-30 |
| BCL3_HUMAN | 45.089 % | 192 | 3.83E-53 |