- Transcript 'KH2012:KH.C10.474.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.474.v1.A.SL1-1
Possible name(s)
HMBS
Gene model
Location
KhC10 [4,855,282 / 4,860,279]
Amino acid sequence
Length: 372
>KH.C10.474.v1.A.SL1-1
HWKLVGSDIIRVKMGDNNILRVGTRKSELAMVQTNWVVNQLKSLNKSLEVEIVQMATIGD
KILDKSLSKTGEKSLFTKELEDALIANQVDLVVNSLKDMPSTLPPNLTISAVSRREDPRD
AVIMHPDNVGKRLEDLPPGSIVGTSSLRRVAQLKKLFPDLKFKSIRGNLNTRLRKLDDAS
NFSAIILAVAGVKRMGWNARISYTLTTDECLYAIGQGALGIETRADDMKSIKLVSQLHDK
DTVIRTVAERAFLKTLGGGCSVPQAVHSWIIEDELYMRGAVFNLDGSKSLYETMQTSLFV
NEDDKKLMEPVDLDSCCEFASITTSHKFINPMLLKASGHLGRDLALLLLQRGATAILDEA
REQNLLRVDDVV
Nucleotide sequence
Length: 1,823
>KH2012:KH.C10.474.v1.A.SL1-1
AACTATAATGACTCCGCATAAAATTAGGAAGAGAAAAAGGCAAATTTTAATGCTTGAGTA
AACATCAGCGTGACATATTTTGAAGACCACACACAAGAAGATTTTAAACACACGGGTTTT
ATCGATCTTTCGTCGTATTTATAACACTGGAAACTGGTTGGATCGGATATCATTCGTGTG
AAAATGGGAGACAACAACATACTTCGTGTGGGGACAAGGAAAAGTGAGTTAGCCATGGTA
CAAACGAACTGGGTTGTCAATCAACTAAAGTCATTGAACAAGTCGTTGGAAGTTGAGATT
GTTCAAATGGCAACAATTGGTGACAAAATATTGGACAAGTCACTTTCTAAGACTGGTGAG
AAAAGTTTGTTCACCAAGGAATTAGAAGATGCTTTGATTGCAAACCAAGTTGATCTTGTT
GTGAATTCATTGAAAGATATGCCGTCAACACTTCCACCAAATCTTACAATATCTGCCGTG
TCCAGACGTGAAGACCCACGTGATGCTGTGATTATGCATCCGGATAATGTTGGGAAGAGA
TTGGAAGATCTTCCTCCTGGGAGTATTGTTGGCACAAGTTCATTGCGAAGAGTCGCGCAA
TTAAAGAAGTTGTTTCCTGATCTCAAGTTTAAAAGCATTCGAGGAAACTTAAACACGAGG
CTTCGTAAACTTGACGATGCCAGTAATTTCTCAGCGATTATTCTCGCGGTGGCTGGTGTT
AAGAGGATGGGATGGAATGCGAGGATCTCTTACACACTTACTACCGATGAATGCTTGTAC
GCGATTGGTCAAGGAGCACTTGGGATCGAAACAAGAGCTGATGATATGAAAAGTATAAAG
TTGGTGTCGCAACTTCACGATAAAGATACTGTGATAAGAACAGTGGCTGAGAGAGCTTTC
CTAAAAACATTGGGAGGGGGGTGTTCGGTTCCACAAGCAGTTCATTCATGGATAATTGAA
GATGAGCTCTACATGAGAGGCGCGGTGTTCAACCTTGATGGTTCCAAGTCACTTTACGAA
ACGATGCAAACATCTCTGTTTGTCAACGAAGATGACAAGAAACTGATGGAGCCAGTAGAC
TTGGATAGTTGTTGTGAGTTTGCGAGCATAACAACCAGCCATAAATTCATCAACCCCATG
TTATTAAAAGCATCCGGACATCTGGGGAGGGATCTCGCTTTGCTTCTTCTTCAACGAGGA
GCAACTGCTATTCTTGATGAAGCTCGCGAGCAGAATTTGCTGCGTGTTGATGATGTTGTG
TGATGTCATAATTATGCCATGTGATGTCATAATGGTGTCATAATGATATCCATTGTCATA
TTATTTAGACCAGGGCTTCTTAAACATTTATTCTCGCGACCCTTTTTAAATTCATTAAAC
TTTCCGCTGCCATTCACAATTAATACAATAATAAATACTTTGTGTATAATTTGTAAACTA
TCAGTGACCCTGAAAGTTCGTTACATGACCCCTAGTTTGGGAAGCCCTGATTTAAATGAT
TGTTTTGCACTTGTGTAATAGTCTATTTCTATTTGAATATCATAACAGAGATTGATTTTT
TTAAGCTGCTCCAAACAGGTTGTATGTATAAGATGTTATGTCAGTGTTTTTATAATGTCC
TGATTATACCAAAACTGGGAGGGTAGTAATAATAATAACCATCACTTTGTTTGTATATAA
TATGCATTGTTTCATATACAATTGGATGCATTTTGGATTTTTCTACTTTTAAGTTAATTT
TTGCAACAAACATTTTTATCATTCGTTGCATTTTGAGCCTGTATAAAAATGATATACCAG
AAAACTAATTTGTCCCACAAAAA
| PIRSF |
HemC (IPR000860) - T[6-368] 6.9E-111 |
| PANTHER |
HemC (IPR000860) - T[16-365] 1.4E-122 |
| Hamap |
HemC (IPR000860) - T[19-351] 32.667 |
| TIGRFAM |
HemC (IPR000860) - T[20-297] 1.3E-95 |
| Pfam |
Porphobilin_deaminase_N (IPR022417) - T[20-229] 6.9E-77 |
| PRINTS |
HemC (IPR000860) - T[59-79] 1.0E-44 - T[90-109] 1.0E-44 - T[141-158] 1.0E-44 - T[160-177] 1.0E-44 - T[248-265] 1.0E-44 |
| SUPERFAMILY |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[238-297] 2.88E-16 |
| Gene3D |
Porphobilinogen_deaminase_C_sf (IPR036803) - T[239-366] 6.8E-32 |
| Pfam |
Porphobilinogen_deaminase_C (IPR022418) - T[245-296] 5.0E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HEM3_HUMAN | 54.958 % | 372 | 2.13E-128 |