- Transcript 'KH2012:KH.C7.324.v2....' >
- Transcript 'KH2012:KH.C10.368.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.368.v1.A.SL1-1
Possible name(s)
PRG4; SBSPON; SPON1
Gene model
Location
KhC10 [2,216,657 / 2,227,579]
Amino acid sequence
Length: 276
>KH.C10.368.v1.A.SL1-1
NNAQKGWLLLPSSEIMYRTYAFAAVCSVCMIITLISDAEAGCEDIGRCCSGKSTGCKYSY
GSSGRHGRVCYCDEYCQKSGDCCSDYESYCLSRAQDCVMTYWSHWSHCTARCGLGMTERR
REVHIPPSGGGKECGKRRQTKACRHNNDRCRNKEIAQILPSYHNRKRNVRDKYERPSVLK
KVKKDSYCVHYRISSIAWYCRYASPYHVLKIGSLVCAECHDTAMDREGHCAGSYTAVRSR
WRSLVGRPCHGTWESEGEKEENCRCGENPGKDFIFV
Nucleotide sequence
Length: 1,942
>KH2012:KH.C10.368.v1.A.SL1-1
ATAAGGACTTTAAAACAACGCGCAAAAGGGCTGGTTGCTTTTGCCCAGCAGTGAAATAAT
GTACAGAACTTATGCGTTTGCTGCCGTGTGCAGTGTGTGTATGATCATTACTTTGATCAG
TGATGCAGAAGCTGGATGTGAAGACATAGGACGTTGCTGCAGCGGGAAGAGCACGGGATG
CAAGTACAGTTACGGATCCTCCGGAAGACACGGACGAGTTTGTTACTGTGATGAATACTG
CCAAAAATCCGGAGATTGTTGTAGCGACTACGAGTCTTATTGCTTATCACGAGCTCAAGA
TTGCGTTATGACATACTGGAGCCATTGGAGTCATTGCACAGCTCGGTGTGGATTGGGAAT
GACAGAACGAAGGAGAGAAGTGCATATACCGCCATCTGGTGGTGGAAAGGAATGTGGAAA
ACGCAGACAAACAAAGGCATGCCGCCATAACAACGATAGATGTCGTAATAAAGAAATCGC
CCAAATTCTGCCATCGTATCACAACCGAAAGAGGAATGTACGTGACAAATACGAACGTCC
AAGTGTGCTCAAAAAAGTTAAAAAAGACAGTTACTGCGTGCATTACCGCATATCATCTAT
TGCTTGGTACTGCCGGTATGCATCACCTTACCACGTATTAAAGATCGGTTCCTTGGTTTG
TGCGGAATGCCATGACACTGCTATGGACAGGGAAGGACACTGTGCCGGCTCTTATACTGC
GGTCCGCAGTCGCTGGAGGTCGCTAGTTGGTCGTCCGTGCCACGGAACATGGGAAAGCGA
AGGCGAAAAGGAAGAGAACTGCAGATGTGGAGAAAATCCGGGAAAAGACTTTATTTTTGT
TTGAGCACAACCACAGACACGCTGAAAACTTAAAACTGACAACACTAGTCTCATTTAAAT
AGGTCGCTCACGCACGATCGCAGGAATCATTTTGAGTCAGCGTCCAGCATGTTCGTAGTA
ACAAAGATATATGCCTCAAGCTAGTAGTATAATTGTACGTCTCACTTCACGTCACTGCTT
GGTCATAATTCATATTTATTCGCTCGATGTATCGACTGTGACGATTCAATCTTTGCCGCA
TTTTAAGGAATTCATAATGAATGCATTTTTGAAATGAGCGGCGAAATATATATGTTTTGC
TACCGCTAGGTGGTAGTAGAGTATGGTTGAAAATCGAGAGATATCATTGTACCACTATTG
TAAAATAACACGAATTTATAAGTTATCTCTTTGGCTGTTCTACCTCGTTTTTTTCGCGGA
CATTAGCGGCTTTATAATGATTCGCTAATATGGGTGTATGTTAGTAAATTTATAGGTCGT
TGGTCGCCAACATTTTCTGTTCTATGGGTAATTTTTTAAACTGCATCTTCACCAGCAGGT
TTAATTCTTCGTTATTTTGTAAAGCGAAGTTCATGAAACAATCCTAAAGAACAAGAAAAA
AGTTCTACTTTTAGACTATAAACGCTGCTGAAGCGTTGCTATGTGGAAAAACCCACACAC
CCACTCGTGCCGTCTGAAACACTCTTATAATGCTTTTTATCGCGATTTCAGCATATATTT
TTTCTTGTTGTGTCTGCTTGCAGCTAAAACCTTTTTTAAAATCACAATTTTTGTAATTGT
TTTTTTTTTTCTTTTTTTTTGATAAATTAAAGTGTTATAAAGTAAAATCAAGATTAATTT
TTATATCTCTGTTTTTTTTCTTGATTCTATATGATCTTGTACAACTGTACATGTATTACG
ATAATCATGAATGACATATTGCAGATTACAGCATTAAATTAAATGAATGGTGGCTCTAGG
TTTTGTAGATTTCGTCGAAAAGATCAACCAGAAAATTATCCACGATTCCGTCGCTTGGAA
CCATCGAGAGCATTCCGTAAATAGCGGAAGTTCCGTTTTTCGGATTAGTTCCATTTTTCT
GCAAAGAAGGGAAACCTTGTGT
| ProSiteProfiles |
Somatomedin_B_dom (IPR001212) - T[44-95] 7.519 |
| SUPERFAMILY |
Somatomedin_B-like_dom_sf (IPR036024) - T[54-94] 2.35E-6 |
| ProSitePatterns |
Somatomedin_B_dom (IPR001212) - T[70-90] . |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[93-143] 1.9E-11 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[96-151] 10.935 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[96-143] 4.45E-9 |
| SMART |
TSP1_rpt (IPR000884) - T[99-151] 4.4E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[102-147] 8.5E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SBSPO_HUMAN | 26.592 % | 91.3 | 8.83E-22 |