- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Moocci.CG.ELv1_2.S13...' >
- Clone 'cien73056' >
- Clone 'cien110669' >
- Transcript 'KH2012:KH.C10.338.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.338.v1.A.nonSL5-1
Possible name(s)
NKX2-1; NKX2-2; NKX2-4
Gene model
Location
KhC10 [3,630,757 / 3,636,439]
Amino acid sequence
Length: 495
>KH.C10.338.v1.A.nonSL5-1
YLILQVNNLFRHWKLCCEMSVSPKHSTTTPFSVTDILSPLEESYGTGSVEGIVSGRREFS
ELYSNMESGAASSAGIHVPNLGGGGSTGSISSPMTSYRQPMMGTPPHHSIHHQQMSSANP
YQTAAGMNGSYNLHPMPTPPQTSFHAMPGSGGPTGYGNGGVPELPPYNNVQSPWYGAPSN
PDPRFVPSYPRLQITGYGSMMPGTGMDGMHKTLLPPSQRRKRRVLFSQAQVFELERRFKQ
QKYLSAPEREHLAQMIHLTPTQVKIWFQNHRYKNKRSLKDKQTQEMSVQQQQQQQQQSQT
SGNAQPQHTNDLSHSNPSQLQPVASAVPGGTRTPQETYSPVPTGVQASQPGMVDGNDGHR
MVHISNQNGDQSSPRHLTMSDGSCHDSTIIESPNMQMPMPNVVQPTDTEAGLGPFSSVIK
LEEVNVDSAEGSGGNSGNIVPQTHYLGSTHHHDLMNVNVTTLNAVDAYQHHPHHNHIPIG
NTVLNDQSILYSVYR
Nucleotide sequence
Length: 2,442
>KH2012:KH.C10.338.v1.A.nonSL5-1
AGATCTTCAAATCGCTCTGAAGCATTATCAAGTCAAGAGTGGAGAGATCAGATCTCATAC
GCATTGTTCAGATATCTCCACTAGGCTAACGAGTGGAAATATACTTAGCTCACAAGTGCC
GGTAACATTCTTGGCCTGCGTCAACAGAAGCAGTTTTAAGTCAATTAATATTTAATCCTG
CAAGTTAATAATTTATTCCGACACTGGAAACTTTGCTGTGAGATGTCAGTGAGCCCAAAG
CATTCGACTACAACCCCATTTTCAGTTACCGATATTTTGAGTCCGCTAGAAGAGTCGTAC
GGGACCGGTTCGGTTGAAGGCATTGTCAGCGGCCGCAGGGAATTTAGCGAGCTGTACAGC
AACATGGAATCCGGCGCGGCCTCGTCGGCGGGAATTCACGTCCCGAATCTCGGCGGGGGA
GGCAGCACGGGGTCGATCTCTTCCCCCATGACTTCGTACCGACAACCGATGATGGGCACG
CCGCCGCACCATTCTATACACCATCAGCAAATGTCATCTGCCAACCCTTACCAGACTGCA
GCAGGAATGAATGGAAGTTATAACCTGCACCCTATGCCTACCCCACCGCAAACTTCGTTT
CATGCAATGCCTGGATCTGGTGGACCGACTGGGTATGGCAACGGGGGTGTTCCGGAGCTG
CCACCGTATAATAATGTACAATCTCCATGGTACGGTGCACCTTCAAATCCAGACCCAAGA
TTTGTCCCAAGTTACCCTCGGTTGCAAATTACTGGTTATGGTTCTATGATGCCAGGTACA
GGCATGGATGGAATGCACAAGACGCTTCTGCCACCATCTCAGAGAAGAAAACGAAGGGTT
CTGTTTTCCCAAGCACAGGTGTTTGAACTAGAGAGACGTTTCAAGCAACAGAAATATCTC
TCCGCCCCTGAAAGGGAACACCTGGCACAAATGATACATCTTACGCCAACGCAGGTTAAA
ATTTGGTTTCAAAATCACCGGTACAAAAACAAACGTTCACTAAAAGACAAGCAAACGCAA
GAAATGAGTGTACAACAACAACAACAGCAGCAACAGCAATCCCAGACCTCTGGTAACGCG
CAGCCTCAACACACAAACGATCTGTCTCACTCGAATCCTAGCCAGCTCCAGCCCGTAGCC
AGTGCGGTACCGGGCGGAACACGGACGCCACAAGAAACGTATTCCCCTGTTCCAACTGGT
GTCCAAGCTTCTCAGCCAGGTATGGTGGATGGAAACGATGGGCATAGGATGGTTCACATT
TCGAACCAGAACGGTGACCAGTCTTCGCCGCGCCATTTAACCATGTCAGATGGTTCTTGC
CACGATTCGACGATCATCGAGTCGCCAAACATGCAAATGCCGATGCCGAACGTCGTGCAA
CCGACCGACACCGAAGCAGGCCTTGGGCCGTTTTCAAGCGTCATAAAACTCGAAGAAGTA
AACGTCGACTCGGCGGAAGGGTCCGGCGGGAACTCGGGCAACATCGTCCCGCAGACGCAC
TACCTTGGCTCGACCCATCACCACGACCTAATGAACGTGAACGTGACGACACTTAATGCG
GTCGACGCGTACCAACACCACCCCCACCATAACCACATCCCTATCGGCAACACTGTCTTG
AACGATCAGTCGATCCTGTACAGTGTTTACCGATGAATTAGCAACTGAACGTACGGCTCT
TATGATAAGGCTGTCTCATGGCTATAGAAGCGAAGGTTAGAGGCAGTAGTAGAACTATAA
GTGTCAACATAACACAATGACTCATAGTTACGTACGCAGGGTCTTCTATTAGTCGTTTTA
CTTCTACAAATACACCGCTATACTTAAGCATACATATTACACAAGTTATACCTGATTCCA
CGTACTTCTGTTTATACGTACTTATGTCAGACTAATCTGAAACTCATTTAATTCAACTTA
AACTTCAAGTCGAAAGTCGTCGAACCGACTTGCCCACTGTTCCGATCGTACACTGTATAA
TTCACTTGAGCAGTCCACTCGATTGCGATATAGCCGCAGCGTCAAGACTACTTACCAGGG
CTTCCAGTACCTCCTCATATAATACTTAATAGACTCAGCAGTCCTGAACGACAGTAATTA
TGAATGGGGAAAACACCATACGGGGTTACCACTGATCTTAATACAGTTTTTGACGAACAG
CAATCATATCTTATTATTGAGAAAAAATGGCGCCACTTTTAGGCGGTTATTGCCAATGTC
TACTGAAGCGTGACGTTGAAGGTGAAATGTTGTTTCTATTCTCCATTCAAATATGTGTTA
TCTTCATATATACCGTGATGTATTACTTGAATTAGGTGCAACGCTTTTGAGGTCAACGAT
GTTTCTTTGCGCGCCTTTTGTATTTTACCTATCCATGTCACACTTTGTTACCTTTTAGGC
GCCCTGTACATATTCATTACCAAATAAATCATCTCTACCGAA
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[201-276] 2.01E-23 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[217-277] 20.018 |
| SMART |
Homeobox_dom (IPR001356) - T[219-281] 1.7E-23 |
| Pfam |
Homeobox_dom (IPR001356) - T[220-276] 2.6E-19 |
| CDD |
Homeobox_dom (IPR001356) - T[220-277] 4.60347E-23 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[252-275] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NKX22_HUMAN | 45.333 % | 118 | 3.07E-30 |
| NKX24_HUMAN | 42.561 % | 155 | 3.81E-43 |
| NKX21_HUMAN | 44.637 % | 183 | 4.2E-53 |