- Transcript 'KH2012:KH.C10.305.v1...' >
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- Transcript 'KH2012:KH.C10.305.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.305.v1.R.ND1-1
Possible name(s)
TBP; TBPL1; TBPL2
Gene model
Location
KhC10 [226,884 / 230,285]
Amino acid sequence
Length: 356
>KH.C10.305.v1.R.ND1-1
MCDFDSSGFQFLFDCYVKDIERKVVAELIYNFKEDFQVSRMNPQGHSIHGMPGTIPNSSG
NRQQMSSNPSLTHHQLTNVMPHSQPHNTFSHQMGGNSLHLPNPSGYSQQMQPHHQIGYKQ
TYATKNITDNNEQTNEQQRQDTLQTTSRSQIQGPPSISTPYSSVHPMTPRTPAEFGVGPP
QLQNIVSTVNLDTKLDLKRIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTG
AKSENASRLAARKYARVVQKLGFPAKFIDFKIQNMVGSVDVKFPIRLEGLVLAHSQFSSY
EPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVYNEIEEAFNNIYPILKGYRKTS
Nucleotide sequence
Length: 1,213
>KH2012:KH.C10.305.v1.R.ND1-1
ATGTGCGATTTCGATTCGTCGGGATTTCAATTCTTATTTGATTGTTACGTAAAAGATATT
GAAAGGAAAGTTGTCGCAGAATTGATTTACAATTTTAAAGAAGACTTCCAGGTATCCAGG
ATGAATCCGCAAGGGCATTCAATACACGGTATGCCTGGTACGATTCCCAACTCCAGCGGG
AACCGCCAACAAATGTCGTCAAATCCAAGTTTAACTCATCATCAATTAACAAATGTAATG
CCTCATTCACAACCACACAATACCTTTTCACATCAGATGGGAGGTAACTCGCTACATTTA
CCAAACCCAAGCGGATACAGTCAACAAATGCAACCCCATCATCAGATTGGATACAAACAA
ACTTATGCTACAAAGAATATTACAGATAATAACGAACAAACAAATGAACAACAAAGACAA
GATACCTTACAAACTACATCGCGGTCACAGATTCAAGGCCCACCTTCCATATCAACTCCT
TATTCAAGCGTTCATCCAATGACACCAAGGACACCAGCAGAGTTTGGTGTTGGACCTCCA
CAACTACAAAACATCGTATCTACGGTCAATCTTGACACAAAGCTTGATTTAAAAAGAATT
GCCCTTCATGCAAGAAATGCTGAGTATAATCCCAAGCGATTTGCAGCTGTTATCATGAGG
ATTAGAGAACCAAGAACCACAGCTCTTATCTTTAGCTCTGGTAAGATGGTGTGTACAGGA
GCAAAGAGTGAGAATGCATCTCGGTTAGCTGCAAGAAAATACGCTCGTGTCGTGCAAAAA
CTTGGTTTTCCTGCAAAGTTTATCGATTTTAAGATACAGAATATGGTGGGGAGTGTGGAT
GTAAAGTTTCCTATCAGACTGGAAGGATTGGTGTTGGCACACAGTCAGTTCTCAAGTTAT
GAGCCTGAGCTTTTCCCTGGATTAATTTACAGAATGGTGAAACCAAGGATTGTACTTCTT
ATATTTGTGTCTGGTAAAGTAGTTCTAACAGGTGCCAAAGTATATAATGAGATAGAGGAA
GCATTCAACAACATATATCCGATACTAAAGGGGTATAGGAAGACTTCTTGAAGATATTGG
TACATTGTGGCCCAAAGTTCACGCCATTCCACGAACTGAACTCTTCGTTTTTTTTCTTTG
CTTTACTTGCATATTACGTTGCAGGATCGTGTGTTTATTGCGCAATCATAAAATAAACGA
CGACTTTTCACAA
| PANTHER |
TBP (IPR000814) - T[39-355] 1.5E-125 |
| Hamap |
TBP (IPR000814) - T[176-355] 27.159 |
| CDD |
TBP_eukaryotic (IPR033710) - T[180-352] 6.46814E-129 |
| Pfam |
TBP (IPR000814) - T[181-260] 1.9E-30 - T[269-350] 2.2E-30 |
| PRINTS |
TBP (IPR000814) - T[182-197] 5.3E-65 - T[206-225] 5.3E-65 - T[225-243] 5.3E-65 - T[272-288] 5.3E-65 - T[296-311] 5.3E-65 - T[315-331] 5.3E-65 |
| Gene3D |
TBP_dom_sf (IPR012295) - T[187-268] 3.3E-40 - T[269-355] 1.1E-38 |
| ProSitePatterns |
TBP_CS (IPR030491) - T[300-349] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBP_HUMAN | 80 % | 337 | 6.32E-115 |
| TBPL2_HUMAN | 81.463 % | 335 | 4.9E-114 |
| TBPL1_HUMAN | 39.306 % | 125 | 1.07E-34 |