- Transcript 'KH2012:KH.C10.280.v1...' >
- Transcript 'KH2012:KH.C10.280.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.280.v1.A.nonSL4-1
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
KhC10 [4,699,435 / 4,703,770]
Amino acid sequence
Length: 411
>KH.C10.280.v1.A.nonSL4-1
YKMATFERSGGSAVRNVKKDNDMSKVTFETSEEVDVTATFDSMGLREDLLRGIYAYGFEK
PSAIQQRAIKQITKGRDVIAQAQSGTGKTATFSISVLQMIDTQLRDTQALVLSPTRELAQ
QIQKVILALGDYMSVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRS
IKMLILDESDEMLNKGFKEQIYDVYRYLPPAIQVVLLSATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVDKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRDA
NFTVLCMHGDMPQKERTEIMKQFRSGESRVLICTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVSINFVKNDDIRILRDIEQYYSTQIDEMPMNVSDLI
Nucleotide sequence
Length: 1,626
>KH2012:KH.C10.280.v1.A.nonSL4-1
TGCTTTCGTTAAGCGTTTATTGGTTCTCTGGTAATTTTTCTCCAATTATATGTGTAACTT
ACGTTAATTTCGAGGTTATTACAAGTTAGGATCATTCAGTTTTATCATTGGTCGTAAAAA
TAATATAAAATGGCAACATTTGAGCGAAGTGGTGGTTCTGCCGTTCGCAACGTAAAGAAA
GATAATGATATGTCAAAAGTTACGTTTGAAACTTCAGAAGAGGTTGATGTCACCGCAACT
TTTGATTCTATGGGACTGAGGGAAGATTTACTAAGAGGAATATATGCTTATGGATTTGAA
AAACCATCAGCAATTCAACAAAGAGCAATCAAGCAAATCACAAAAGGCAGGGATGTCATT
GCACAGGCTCAATCCGGTACTGGTAAAACTGCCACATTCTCCATCTCCGTCCTTCAGATG
ATCGACACCCAACTTCGTGATACTCAAGCTCTGGTGCTTTCCCCAACAAGAGAATTGGCC
CAACAGATTCAAAAGGTTATTCTTGCCCTTGGTGATTACATGTCAGTACAATGTCATGCT
TGTATTGGAGGTACAAACGTAGGAGAGGACATTCGTAAATTGGATTATGGTCAACATGTT
GTGTCTGGAACACCAGGGCGTGTATTCGACATGATCCGCAGAAGAAGTCTCCGTACTCGT
TCCATCAAGATGTTAATTCTCGATGAATCCGATGAAATGTTGAACAAAGGATTCAAAGAA
CAAATTTACGACGTTTACCGATATTTGCCGCCAGCAATACAGGTTGTATTATTGAGTGCT
ACACTTCCGCACGAAATCCTTGAGATGACAAACAAGTTCATGACTGACCCGATCAGAATT
CTCGTCAAACGTGATGAACTGACACTAGAGGGCATCAAGCAGTTCTTCGTAGCTGTAGAC
AAGGAGGAATGGAAGTTCGACACTTTATGTGATCTTTATGATACTCTTACCATCACACAA
GCTGTCATATTCTGCAACACAAAGCGTAAGGTTGACTGGCTGACTGAAAAAATGCGAGAT
GCCAACTTCACTGTATTGTGTATGCATGGTGATATGCCACAGAAGGAGAGGACTGAAATT
ATGAAACAATTCAGATCAGGAGAAAGTCGTGTATTGATCTGCACTGATGTTTGGGCTCGT
GGATTGGATGTTCCACAAGTATCTCTCATTATCAACTATGATCTACCGAACAACAGAGAA
CTTTACATTCATAGGATTGGAAGATCTGGACGTTATGGCAGAAAGGGTGTGTCTATCAAC
TTTGTTAAGAACGATGATATTCGTATCTTGCGTGATATTGAGCAATATTACTCCACACAA
ATTGATGAAATGCCCATGAATGTTTCTGACTTGATCTGAACAAGATGGTAGAAAACTTGT
TCGTCTTCATGACTTGAAACAATTTTTAAGCATGTTGAATAACCACAACATACACGCAGT
TTCTTTATGCTGTGTAGAACATCTGTATATTTTATCCCAGACCAGAGACATTGCATTTTT
ACGTAGTCAGCGCGAATACAATTTGTGAATATCCAAACGGCCTTTCAGTAGTCATAATGT
AAAATGTTTCGTACCAATTTTAAAATTTTTTTTGAGATCTTGAAAATAAATGAAACTTCG
ATTTTA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[38-66] 10.609 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[57-254] 1.1E-60 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[63-225] 1.3E-42 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[69-239] 30.528 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[106-394] 3.66E-76 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[250-411] 27.08 |
| CDD |
Helicase_C (IPR001650) - T[251-380] 4.02576E-45 |
| Pfam |
Helicase_C (IPR001650) - T[264-372] 1.8E-32 |
| SMART |
Helicase_C (IPR001650) - T[291-372] 1.9E-36 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 89.082 % | 758 | 0 |
| IF4A1_HUMAN | 69.048 % | 523 | 0 |
| IF4A2_HUMAN | 69.841 % | 528 | 0 |