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- Transcript 'KH2012:KH.C10.264.v3...'
Transcript Model
Transcript Id
KH2012:KH.C10.264.v3.A.SL3-1
Possible name(s)
HNRNPDL; MSI1; MSI2
Gene model
Location
KhC10 [4,437,241 / 4,445,969]
Amino acid sequence
Length: 310
>KH.C10.264.v3.A.SL3-1
MVTRTKKIFVGGLSANTVVDDLKNYFGTYGKVEDAMLMFDKQTNRHRGFGFVTFDNEEPV
EKVCEIHFHEINNKMVECKKAQPKEVMLPTLARGTARRTYVDPSSAYVLAAGIPGLAYGR
PAAAAATAYAYPSAYAAYPGALSFVDPAATATGTGAFYHPSFALAPSPAPAQALYTPDAT
TAMAGLARVGVAPVPGRLEALATPTAGNLTQPASVADIKRDFVASVLSSYAHGAAAPAFA
SYHPSPSPGARAFANGTTAGEILTSADPALAQHYIGQNASPQPGLTATIPGGLAGHFASQ
GPLIAGLTYP
Nucleotide sequence
Length: 2,443
>KH2012:KH.C10.264.v3.A.SL3-1
ATGGTGACAAGGACGAAAAAAATATTTGTTGGTGGATTGTCCGCCAACACAGTGGTTGAT
GATCTCAAAAACTACTTCGGAACATACGGCAAGGTTGAAGATGCAATGCTAATGTTCGAC
AAACAGACGAACCGCCACAGAGGGTTTGGCTTCGTAACTTTTGACAACGAAGAGCCGGTC
GAAAAGGTTTGCGAAATTCACTTCCACGAAATCAACAACAAAATGGTCGAGTGCAAAAAA
GCACAACCTAAAGAAGTAATGTTGCCAACTTTGGCGAGAGGAACAGCAAGGAGGACTTAC
GTTGACCCATCATCGGCGTATGTGTTAGCGGCAGGCATTCCAGGTTTGGCATACGGACGA
CCAGCAGCGGCAGCAGCCACAGCGTATGCTTACCCATCTGCATATGCGGCTTATCCAGGA
GCTCTGAGTTTCGTGGACCCAGCGGCGACCGCTACGGGCACTGGGGCTTTTTACCACCCC
AGTTTTGCCCTAGCCCCATCCCCTGCTCCTGCCCAAGCGCTCTATACCCCCGATGCTACA
ACAGCGATGGCAGGGCTTGCCAGAGTCGGTGTGGCGCCAGTTCCGGGGCGTCTGGAGGCC
CTGGCCACCCCTACAGCAGGCAACTTAACACAGCCGGCCTCAGTAGCTGATATAAAACGA
GACTTTGTTGCATCAGTACTAAGTAGCTACGCCCATGGAGCTGCAGCTCCTGCCTTTGCC
AGCTACCATCCTTCGCCCTCTCCTGGTGCTAGGGCGTTCGCTAACGGAACAACAGCAGGC
GAAATATTAACCTCCGCTGACCCAGCGCTAGCTCAACACTACATCGGGCAGAACGCATCT
CCTCAGCCGGGTTTGACCGCCACGATTCCCGGGGGACTGGCCGGTCATTTCGCCTCGCAA
GGACCACTGATAGCTGGCCTCACGTACCCTTAATCACGTGTTCGTCTGAAAGCTGATTGG
ATGTGGGTCTGTTACGTCATAGTTCGGTGGTTTTCAAAGCACAAATTGGTTGCTTTTATA
TCCTGATTGTAAATATTGTTTTTCTTATACCTAAGACGTATAACACGCCTGTATTCATGT
GTTTGCCACCAGCGCTCGGTTCACAAGGACCCGTTTAAAGCGCGCGGCAGCTTCACGGTG
CCATGTTCGAACCAGTGTGAAAATTATTGCATCGCTCGTTCAAGTTTTGAGTTTTCTGCG
TTTTTTCCGTTTTTTTCTATCTTTTTTTTCAGCGAAATTTCCCGAAGTTGCACGCGTATC
TCTCTCAACTCTATCCTCCAATCGCAGCCGCTGGTTTGGCTCGCCACTGTGACGTCACAA
ATGCAATAATAAACGAATAGAAACTTCACAAACGTAGAAATAGCTGGTAGAAATAACAGT
GTACACATGTGACGTCAGTAGATAGGAACAAATCCTTTGCGATAATCTTTTGCGCCACCC
AGCGTACGAATAACGTAGTATATGATTTCTATGGTAAACAGGGGTGGGTGGCGGGTGAAT
TTGTAATAATTACACACGACTTTTTTTTTCTTATCCTTCCTCGAGCCTGACGTTCAAATG
CATACGTGGCGATGCTAATTCTCCTGCGTAGGTGTGACGTAGTCCTAGCGGTGACGTCAT
GATGACGTAGAACGAACCCTGGCATCTTACCGTTAATAGTGTGGAATAGTTCACTGCCTG
ATAAGAATCAAAACAAAATTTTATTTTCCTTCGACCGCAGGTGCCTTTATTATCGTCATT
GTGATGATCGGAAACCGAAATAGTCCGATCCTTTCCGAAATATATGACGTCGCGTCCGGC
TTGTGTAACCCCCGCGTACTAACCAGTAGCGAACGTAGACGCCTAACATTTTTGCTTCTC
TATTGGATTTTACCGAATCCAAATAGTCGGATCGTATTTTTGCACGGCTCTGTACATTGT
ATGCTCGTACTTTAAAAGCAAAACCAAACCTTTGGCATTGTAATAGTGGTGTGGCTAATC
AAAGCATCACTGTGTTAACCATTTCTTCACATACAGCCTATTATCGATACTTTTGTTCGG
TGTAACCCGCACAAAACACTCGTATTCTCACAACCACGGTCTATATGCTCTACCCAACGT
ACTATACGTACCCCTTGTACATACAACCGTTTATATATAACTCGTTTTCTGATTTTACCT
TTTCTCCGCTTACCTGGTCAAATTAAACAATCCTTACTCGCTATTAGATACCCGTCTCGT
GACGTCACGTTCGCGTGACGTTATGCTGACGTGACGTCACACGGGTCGTTTGTTAGATTT
CTCTAGAACGGTAGAGTAGCACTCAGACAGTGCAATTGGTTTGTTATTTTGGGCGGTGTG
TATCCGACGACGTTTTTTTTTCTTTTTCTCGCATTCGGTTGTTCCCTGTTGTATATATGA
GTTTTTCAAGTTCTGTTGGTTTAAAAATAAACCAAATACCCGG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[5-99] 2.42E-25 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-81] 4.9E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[6-83] 16.807 |
| CDD |
MSI_RRM2 (IPR034126) - T[7-80] 6.56989E-55 |
| SMART |
RRM_dom (IPR000504) - T[7-79] 1.3E-22 |
| Pfam |
RRM_dom (IPR000504) - T[8-74] 2.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HNRDL_HUMAN | 49.383 % | 91.7 | 7.66E-21 |
| MSI2H_HUMAN | 53.846 % | 186 | 8.16E-57 |
| MSI1H_HUMAN | 65.248 % | 175 | 2.05E-52 |