- Clone 'mae16j24' >
- Transcript 'KH2012:KH.C10.264.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.264.v1.A.SL2-1
Possible name(s)
HNRNPDL; MSI1; MSI2
Gene model
Location
KhC10 [4,435,825 / 4,445,969]
Amino acid sequence
Length: 310
>KH.C10.264.v1.A.SL2-1
MVTRTKKIFVGGLSANTVVDDLKNYFGTYGKVEDAMLMFDKQTNRHRGFGFVTFDNEEPV
EKVCEIHFHEINNKMVECKKAQPKEVMLPTLARGTARRTYVDPSSAYVLAAGIPGLAYGR
PAAAAATAYAYPSAYAAYPGALSFVDPAATATGTGAFYHPSFALAPSPAPAQALYTPDAT
TAMAGLARVGVAPVPGRLEALATPTAGNLTQPASVADIKRDFVASVLSSYAHGAAAPAFA
SYHPSPSPGARAFANGTTAGEILTSADPALAQHYIGQNASPQPGLTATIPGGLAGHFASQ
GPLIAGLTYP
Nucleotide sequence
Length: 2,561
>KH2012:KH.C10.264.v1.A.SL2-1
GGAAACTCTTTAATTTTGTAGCTTTCAGTTCACGTAGATTAGAACGGTGTATACGTGTAA
TTTGCTGTAGCATATAACTTTAAGCATTCCATTAGATTTCACCATTTGTTTTACATAGAT
GGTGACAAGGACGAAAAAAATATTTGTTGGTGGATTGTCCGCCAACACAGTGGTTGATGA
TCTCAAAAACTACTTCGGAACATACGGCAAGGTTGAAGATGCAATGCTAATGTTCGACAA
ACAGACGAACCGCCACAGAGGGTTTGGCTTCGTAACTTTTGACAACGAAGAGCCGGTCGA
AAAGGTTTGCGAAATTCACTTCCACGAAATCAACAACAAAATGGTCGAGTGCAAAAAAGC
ACAACCTAAAGAAGTAATGTTGCCAACTTTGGCGAGAGGAACAGCAAGGAGGACTTACGT
TGACCCATCATCGGCGTATGTGTTAGCGGCAGGCATTCCAGGTTTGGCATACGGACGACC
AGCAGCGGCAGCAGCCACAGCGTATGCTTACCCATCTGCATATGCGGCTTATCCAGGAGC
TCTGAGTTTCGTGGACCCAGCGGCGACCGCTACGGGCACTGGGGCTTTTTACCACCCCAG
TTTTGCCCTAGCCCCATCCCCTGCTCCTGCCCAAGCGCTCTATACCCCCGATGCTACAAC
AGCGATGGCAGGGCTTGCCAGAGTCGGTGTGGCGCCAGTTCCGGGGCGTCTGGAGGCCCT
GGCCACCCCTACAGCAGGCAACTTAACACAGCCGGCCTCAGTAGCTGATATAAAACGAGA
CTTTGTTGCATCAGTACTAAGTAGCTACGCCCATGGAGCTGCAGCTCCTGCCTTTGCCAG
CTACCATCCTTCGCCCTCTCCTGGTGCTAGGGCGTTCGCTAACGGAACAACAGCAGGCGA
AATATTAACCTCCGCTGACCCAGCGCTAGCTCAACACTACATCGGGCAGAACGCATCTCC
TCAGCCGGGTTTGACCGCCACGATTCCCGGGGGACTGGCCGGTCATTTCGCCTCGCAAGG
ACCACTGATAGCTGGCCTCACGTACCCTTAATCACGTGTTCGTCTGAAAGCTGATTGGAT
GTGGGTCTGTTACGTCATAGTTCGGTGGTTTTCAAAGCACAAATTGGTTGCTTTTATATC
CTGATTGTAAATATTGTTTTTCTTATACCTAAGACGTATAACACGCCTGTATTCATGTGT
TTGCCACCAGCGCTCGGTTCACAAGGACCCGTTTAAAGCGCGCGGCAGCTTCACGGTGCC
ATGTTCGAACCAGTGTGAAAATTATTGCATCGCTCGTTCAAGTTTTGAGTTTTCTGCGTT
TTTTCCGTTTTTTTCTATCTTTTTTTTCAGCGAAATTTCCCGAAGTTGCACGCGTATCTC
TCTCAACTCTATCCTCCAATCGCAGCCGCTGGTTTGGCTCGCCACTGTGACGTCACAAAT
GCAATAATAAACGAATAGAAACTTCACAAACGTAGAAATAGCTGGTAGAAATAACAGTGT
ACACATGTGACGTCAGTAGATAGGAACAAATCCTTTGCGATAATCTTTTGCGCCACCCAG
CGTACGAATAACGTAGTATATGATTTCTATGGTAAACAGGGGTGGGTGGCGGGTGAATTT
GTAATAATTACACACGACTTTTTTTTTCTTATCCTTCCTCGAGCCTGACGTTCAAATGCA
TACGTGGCGATGCTAATTCTCCTGCGTAGGTGTGACGTAGTCCTAGCGGTGACGTCATGA
TGACGTAGAACGAACCCTGGCATCTTACCGTTAATAGTGTGGAATAGTTCACTGCCTGAT
AAGAATCAAAACAAAATTTTATTTTCCTTCGACCGCAGGTGCCTTTATTATCGTCATTGT
GATGATCGGAAACCGAAATAGTCCGATCCTTTCCGAAATATATGACGTCGCGTCCGGCTT
GTGTAACCCCCGCGTACTAACCAGTAGCGAACGTAGACGCCTAACATTTTTGCTTCTCTA
TTGGATTTTACCGAATCCAAATAGTCGGATCGTATTTTTGCACGGCTCTGTACATTGTAT
GCTCGTACTTTAAAAGCAAAACCAAACCTTTGGCATTGTAATAGTGGTGTGGCTAATCAA
AGCATCACTGTGTTAACCATTTCTTCACATACAGCCTATTATCGATACTTTTGTTCGGTG
TAACCCGCACAAAACACTCGTATTCTCACAACCACGGTCTATATGCTCTACCCAACGTAC
TATACGTACCCCTTGTACATACAACCGTTTATATATAACTCGTTTTCTGATTTTACCTTT
TCTCCGCTTACCTGGTCAAATTAAACAATCCTTACTCGCTATTAGATACCCGTCTCGTGA
CGTCACGTTCGCGTGACGTTATGCTGACGTGACGTCACACGGGTCGTTTGTTAGATTTCT
CTAGAACGGTAGAGTAGCACTCAGACAGTGCAATTGGTTTGTTATTTTGGGCGGTGTGTA
TCCGACGACGTTTTTTTTTCTTTTTCTCGCATTCGGTTGTTCCCTGTTGTATATATGAGT
TTTTCAAGTTCTGTTGGTTTAAAAATAAACCAAATACCCGG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[5-99] 2.42E-25 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-81] 4.9E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[6-83] 16.807 |
| CDD |
MSI_RRM2 (IPR034126) - T[7-80] 6.56989E-55 |
| SMART |
RRM_dom (IPR000504) - T[7-79] 1.3E-22 |
| Pfam |
RRM_dom (IPR000504) - T[8-74] 2.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HNRDL_HUMAN | 49.383 % | 91.7 | 7.66E-21 |
| MSI2H_HUMAN | 53.846 % | 186 | 8.16E-57 |
| MSI1H_HUMAN | 65.248 % | 175 | 2.05E-52 |