- Transcript 'KH2012:KH.C10.222.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.222.v1.R.ND2-1
Possible name(s)
VPS29
Gene model
Location
KhC10 [2,945,071 / 2,948,314]
Amino acid sequence
Length: 186
>KH.C10.222.v1.R.ND2-1
IINMVLVLVVGDMHIPFRASGLSPKFKKLLVPGKIQHILCTGNLCTRESYDYLKTLASDV
HVVRGDFDENVNYPEQKVVTVGQFRIGMCHGHQICPWGDTESLAMLQRQLNVDILIFGHT
HKFEAYEHESHFYINPGSITGAFSPTASEVIPSFVLMDIQASTVVTYVYQLQANDVKVER
IEYQKS
Nucleotide sequence
Length: 1,261
>KH2012:KH.C10.222.v1.R.ND2-1
TAAATCAAAATATTGCTTTTGCGGGGCTTGAGTTCGAAACTGATTTCCGTTAAATAATCA
ACATGGTGCTTGTTCTTGTGGTTGGAGACATGCACATTCCATTCCGGGCCTCTGGTTTGT
CCCCAAAGTTTAAGAAACTTTTAGTGCCAGGGAAAATCCAGCATATCCTCTGTACAGGCA
ACCTGTGCACTAGAGAGTCGTATGATTATCTCAAAACACTCGCAAGCGATGTGCACGTTG
TAAGGGGAGACTTTGATGAAAATGTTAACTATCCTGAACAGAAAGTAGTAACAGTAGGTC
AGTTCCGAATTGGGATGTGTCATGGCCATCAGATATGTCCATGGGGAGACACTGAAAGCT
TAGCAATGTTACAACGACAATTGAATGTTGACATCTTAATATTCGGCCACACACATAAAT
TTGAAGCATATGAACATGAGAGTCACTTTTATATCAACCCAGGCAGCATAACAGGTGCCT
TTTCACCAACTGCAAGTGAGGTTATTCCATCCTTTGTTCTTATGGATATCCAAGCAAGTA
CTGTTGTAACATACGTATACCAACTGCAAGCCAATGACGTTAAAGTGGAGAGAATAGAAT
ATCAAAAGTCGTGATCATCAGGTTATAACTTTCAACCTTACAGTGCAATGAGTGGTATAA
TCGCTTCAGCTCTCTGCAGTGTCTATTCTAATTTTCATAAAATTCTCACGTTGATTTTCA
TTAGGCGGAAAAACGACCAACCTACAGTAAACTTTAGCTCAAATACTTAAAAAAAGTTGC
TACCATATTTATATGTATTTACAATATTGAATGAAGGCTTAAGATCTTTTTTTTTCAAGC
GCCCAATCAAAAAAGGTAGGAAAACTAAGGTGTTTAGTGCCATGTGGTAAAAAAAATTGC
ATTGATAAAAAATATTAAGAAAGTTATTTTTTGGCCCATTTGGTAGTAAACAAAGAACAT
TCAAAGAATTATAAAACTGTATCCTATGACTCCCATAGACCGTTGTTAATTGTTTAAAAC
ACGATCAGGATATTTGGATATTCTGTGTTAAGGGTTTCCGGGCTTCCCCCACCCTACTAT
ATGTTTTTTAACAAAAAATGTTAAACTATATCCCTTTTAAATATTCTAATCTGCTGGCCA
TTAGGAGCAAATCTTTAATACGAGATTGTTGTCTTCAATTCATGTTATGAATTTTCTTGA
TTCGTTGTAACACGTCATGCTTTATATTGCGTAAATTCATCTTATAAAGTGAAAAACCGT
T
| Gene3D |
Metallo-depent_PP-like (IPR029052) - T[2-185] 2.7E-80 |
| PANTHER |
Vps29 (IPR028661) - T[4-185] 7.6E-88 |
| PANTHER |
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[4-185] 7.6E-88 |
| TIGRFAM |
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[6-158] 1.2E-32 |
| CDD |
Vps29 (IPR028661) - T[6-183] 7.12449E-128 |
| Pfam |
Calcineurin-like_PHP_lpxH (IPR024654) - T[7-160] 1.2E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS29_HUMAN | 77.901 % | 305 | 1.78E-107 |