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TRANSCRIPT CARD

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  1. Clone 'ciad060a02' > 
  2. Transcript 'KH2012:KH.L54.3.v1.B...' > 
  3. Transcript 'KH2012:KH.C10.222.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.222.v1.A.nonSL6-1

Possible name(s)

VPS29

Gene model

KH2012:KH.C10.222

Location

KhC10 [2,945,064 / 2,948,314]

Sequences

Amino acid sequence

Length: 186

>KH.C10.222.v1.A.nonSL6-1
IINMVLVLVVGDMHIPFRASGLSPKFKKLLVPGKIQHILCTGNLCTRESYDYLKTLASDV
HVVRGDFDENVNYPEQKVVTVGQFRIGMCHGHQICPWGDTESLAMLQRQLNVDILIFGHT
HKFEAYEHESHFYINPGSITGAFSPTASEVIPSFVLMDIQASTVVTYVYQLQANDVKVER
IEYQKS

Nucleotide sequence

Length: 1,268

>KH2012:KH.C10.222.v1.A.nonSL6-1
AGACTGCTAAATCAAAATATTGCTTTTGCGGGGCTTGAGTTCGAAACTGATTTCCGTTAA
ATAATCAACATGGTGCTTGTTCTTGTGGTTGGAGACATGCACATTCCATTCCGGGCCTCT
GGTTTGTCCCCAAAGTTTAAGAAACTTTTAGTGCCAGGGAAAATCCAGCATATCCTCTGT
ACAGGCAACCTGTGCACTAGAGAGTCGTATGATTATCTCAAAACACTCGCAAGCGATGTG
CACGTTGTAAGGGGAGACTTTGATGAAAATGTTAACTATCCTGAACAGAAAGTAGTAACA
GTAGGTCAGTTCCGAATTGGGATGTGTCATGGCCATCAGATATGTCCATGGGGAGACACT
GAAAGCTTAGCAATGTTACAACGACAATTGAATGTTGACATCTTAATATTCGGCCACACA
CATAAATTTGAAGCATATGAACATGAGAGTCACTTTTATATCAACCCAGGCAGCATAACA
GGTGCCTTTTCACCAACTGCAAGTGAGGTTATTCCATCCTTTGTTCTTATGGATATCCAA
GCAAGTACTGTTGTAACATACGTATACCAACTGCAAGCCAATGACGTTAAAGTGGAGAGA
ATAGAATATCAAAAGTCGTGATCATCAGGTTATAACTTTCAACCTTACAGTGCAATGAGT
GGTATAATCGCTTCAGCTCTCTGCAGTGTCTATTCTAATTTTCATAAAATTCTCACGTTG
ATTTTCATTAGGCGGAAAAACGACCAACCTACAGTAAACTTTAGCTCAAATACTTAAAAA
AAGTTGCTACCATATTTATATGTATTTACAATATTGAATGAAGGCTTAAGATCTTTTTTT
TTCAAGCGCCCAATCAAAAAAGGTAGGAAAACTAAGGTGTTTAGTGCCATGTGGTAAAAA
AAATTGCATTGATAAAAAATATTAAGAAAGTTATTTTTTGGCCCATTTGGTAGTAAACAA
AGAACATTCAAAGAATTATAAAACTGTATCCTATGACTCCCATAGACCGTTGTTAATTGT
TTAAAACACGATCAGGATATTTGGATATTCTGTGTTAAGGGTTTCCGGGCTTCCCCCACC
CTACTATATGTTTTTTAACAAAAAATGTTAAACTATATCCCTTTTAAATATTCTAATCTG
CTGGCCATTAGGAGCAAATCTTTAATACGAGATTGTTGTCTTCAATTCATGTTATGAATT
TTCTTGATTCGTTGTAACACGTCATGCTTTATATTGCGTAAATTCATCTTATAAAGTGAA
AAACCGTT

InterProScan

Gene3D
Metallo-depent_PP-like (IPR029052) - T[2-185] 2.7E-80
PANTHER
Vps29 (IPR028661) - T[4-185] 7.6E-88
PANTHER
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[4-185] 7.6E-88
TIGRFAM
Phosphodiesterase_MJ0936/Vps29 (IPR000979) - T[6-158] 1.2E-32
CDD
Vps29 (IPR028661) - T[6-183] 7.12449E-128
Pfam
Calcineurin-like_PHP_lpxH (IPR024654) - T[7-160] 1.2E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VPS29_HUMAN 77.901 % 305 1.78E-107