- Region 'REG00000093' >
- Transcript 'KH2012:KH.C10.200.v2...' >
- Transcript 'KH2012:KH.C10.200.v2...'
Transcript Model
Transcript Id
KH2012:KH.C10.200.v2.A.SL2-1
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
KhC10 [4,408,677 / 4,415,422]
Amino acid sequence
Length: 528
>KH.C10.200.v2.A.SL2-1
AFLIPYFLMIVFGGIPLFYLELILGQYHRTGCISIWGKICPIFKGVGYAICLMALYVSSY
YNTVIGWAVYYLYSSFAYELPWATCNHSWTDSRCLDKINAAAHNQTWTNDTQSPAQQFFD
RHVLEVYKSTGLGDLGPPRWQIVLCLFVVYFILYFCLWKGVRSSGKVVWVTATFPYIVLF
ILLIRGAMLPGASIGISYYLSPQWHLLAKPTVWLEAATQVFFSLGPGFGTLIALSSYNRF
DNNCYRDAFITSVVNCLTSFMAGFVVFSVLGYMAHLLNKTDIEEVTTPVTFTYSPTGVGL
LFVVYGQALTTFSGSVFFSIIFFLMIITLGLDSSFGGLEAVITGFSDEYPETIGKHREKF
VLGLLSVSFLLALATTTQGGVYLMTLLEVYATGPAIMTVVLLESISVTWFYGINRLCEDI
KAMLGFGPGIFWRVCWTVISPLFVSFMIVMSFIFTSNLQYGDYIFPNWSTWIGWAITLSS
ITIVPVYALYKFIFEPGSPQQRCFSLLRPEVGGQAQPRESLAMTSVPA
Nucleotide sequence
Length: 1,960
>KH2012:KH.C10.200.v2.A.SL2-1
GTGCGTTTTTGATTCCTTACTTCCTGATGATTGTCTTCGGGGGGATTCCCCTATTCTATC
TCGAGCTGATACTGGGTCAGTATCACCGAACGGGGTGCATTTCAATATGGGGGAAGATTT
GCCCGATTTTCAAAGGTGTGGGGTACGCGATTTGCTTGATGGCACTCTATGTGTCTAGTT
ACTACAACACAGTCATAGGATGGGCTGTGTATTACTTATACAGTTCATTTGCATATGAGT
TACCATGGGCAACCTGCAACCATTCATGGACTGACAGTCGATGTTTGGATAAAATAAACG
CAGCTGCTCACAACCAGACGTGGACTAACGACACTCAGTCACCAGCGCAACAATTCTTCG
ATCGGCATGTACTTGAGGTTTACAAATCAACTGGGTTGGGAGATCTTGGTCCACCAAGGT
GGCAGATTGTGCTGTGTTTGTTCGTGGTTTATTTCATTCTATATTTCTGCCTTTGGAAAG
GAGTGAGGTCTTCTGGAAAGGTAGTTTGGGTGACAGCTACATTCCCGTACATCGTTCTAT
TCATCCTCCTCATCAGAGGAGCGATGCTTCCAGGAGCTTCCATTGGCATCAGTTATTATC
TCAGTCCACAGTGGCATCTACTTGCTAAACCAACTGTATGGCTGGAAGCAGCAACTCAGG
TCTTCTTCTCACTGGGTCCTGGGTTTGGCACACTCATCGCATTATCAAGTTACAACAGAT
TTGACAACAACTGTTACAGAGATGCCTTCATCACAAGTGTTGTAAACTGCCTTACAAGTT
TCATGGCTGGGTTCGTTGTATTCTCAGTACTTGGCTACATGGCTCATTTATTGAATAAAA
CTGACATAGAAGAAGTTACCACACCAGTAACTTTCACATATTCACCCACAGGAGTTGGTT
TATTATTCGTTGTATACGGACAAGCACTCACAACTTTTAGCGGATCGGTTTTCTTCTCCA
TAATCTTCTTCCTGATGATCATAACACTTGGACTTGATAGCTCGTTTGGTGGGTTAGAAG
CGGTCATTACTGGGTTTTCTGACGAGTATCCAGAAACGATTGGAAAACATCGGGAGAAAT
TTGTTCTTGGGCTTCTTTCTGTCAGTTTTTTACTTGCCTTAGCTACTACTACTCAAGGGG
GAGTCTACCTGATGACATTGCTAGAGGTCTATGCTACAGGTCCTGCTATTATGACTGTTG
TATTATTGGAATCAATATCTGTCACCTGGTTTTATGGTATAAATAGATTGTGTGAAGACA
TCAAAGCAATGCTTGGATTTGGACCTGGTATTTTCTGGCGAGTTTGCTGGACTGTGATAA
GCCCCTTGTTTGTTTCGTTCATGATCGTGATGAGTTTTATTTTCACATCAAATCTCCAAT
ATGGGGATTACATCTTTCCTAATTGGTCAACATGGATAGGCTGGGCAATCACTCTTTCTT
CCATCACTATAGTTCCAGTGTATGCTCTCTACAAATTCATTTTTGAGCCAGGTTCTCCAC
AGCAGCGCTGCTTCTCATTACTAAGACCAGAAGTTGGAGGTCAAGCCCAGCCTCGAGAAT
CTCTTGCTATGACATCAGTTCCAGCCTAGTGATGTCATAATACATGTTGTAGATCACTAC
ATGAGGCGTATTAATTACAAAACCTCAAAAGCCTAGATTCTTACACAAGCCAAGAAATTG
TCAACTTTTAATTCAATATTGCTGCCAAAGCTGTTACAACGCCAATTTTACACAAGCTGT
AAATTCAATTGTTTTTCTTTGGAAGTTGTTAAAGTTCTTAAAATATGAAGCAATCTGTAC
AGAAACTTTGTGTTCATGTATATACGACTGGTGCTCTTTATATTTGTCTTTGTTTAAAGT
TCGTCATTTTTACTAACGACTGATTTTTGAAAGATTCTCTTTTTGAAGCTTGCTGGTTAA
TGAAGCTGTGTAAAATATTTCATGCCATATTATACGAGAA
| PRINTS |
Na/ntran_symport (IPR000175) - T[1-20] 9.1E-62 - T[45-71] 9.1E-62 - T[167-184] 9.1E-62 - T[249-269] 9.1E-62 - T[312-331] 9.1E-62 - T[393-413] 9.1E-62 - T[433-453] 9.1E-62 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[1-514] 4.9E-207 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-492] 2.88E-140 |
| Pfam |
Na/ntran_symport (IPR000175) - T[1-493] 2.8E-186 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-497] 87.813 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 51.362 % | 562 | 0 |
| SC6A3_HUMAN | 47.985 % | 508 | 1.72E-175 |
| SC6A4_HUMAN | 53.529 % | 584 | 0 |