- Region 'REG00000093' >
- Transcript 'KH2012:KH.C10.200.v2...' >
- Transcript 'KH2012:KH.C10.200.v2...' >
- Transcript 'KH2012:KH.C10.200.v2...'
Transcript Model
Transcript Id
KH2012:KH.C10.200.v2.A.nonSL9-1
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
KhC10 [4,408,677 / 4,415,352]
Amino acid sequence
Length: 505
>KH.C10.200.v2.A.nonSL9-1
LGQYHRTGCISIWGKICPIFKGVGYAICLMALYVSSYYNTVIGWAVYYLYSSFAYELPWA
TCNHSWTDSRCLDKINAAAHNQTWTNDTQSPAQQFFDRHVLEVYKSTGLGDLGPPRWQIV
LCLFVVYFILYFCLWKGVRSSGKVVWVTATFPYIVLFILLIRGAMLPGASIGISYYLSPQ
WHLLAKPTVWLEAATQVFFSLGPGFGTLIALSSYNRFDNNCYRDAFITSVVNCLTSFMAG
FVVFSVLGYMAHLLNKTDIEEVTTPVTFTYSPTGVGLLFVVYGQALTTFSGSVFFSIIFF
LMIITLGLDSSFGGLEAVITGFSDEYPETIGKHREKFVLGLLSVSFLLALATTTQGGVYL
MTLLEVYATGPAIMTVVLLESISVTWFYGINRLCEDIKAMLGFGPGIFWRVCWTVISPLF
VSFMIVMSFIFTSNLQYGDYIFPNWSTWIGWAITLSSITIVPVYALYKFIFEPGSPQQRC
FSLLRPEVGGQAQPRESLAMTSVPA
Nucleotide sequence
Length: 1,890
>KH2012:KH.C10.200.v2.A.nonSL9-1
ACTGGGTCAGTATCACCGAACGGGGTGCATTTCAATATGGGGGAAGATTTGCCCGATTTT
CAAAGGTGTGGGGTACGCGATTTGCTTGATGGCACTCTATGTGTCTAGTTACTACAACAC
AGTCATAGGATGGGCTGTGTATTACTTATACAGTTCATTTGCATATGAGTTACCATGGGC
AACCTGCAACCATTCATGGACTGACAGTCGATGTTTGGATAAAATAAACGCAGCTGCTCA
CAACCAGACGTGGACTAACGACACTCAGTCACCAGCGCAACAATTCTTCGATCGGCATGT
ACTTGAGGTTTACAAATCAACTGGGTTGGGAGATCTTGGTCCACCAAGGTGGCAGATTGT
GCTGTGTTTGTTCGTGGTTTATTTCATTCTATATTTCTGCCTTTGGAAAGGAGTGAGGTC
TTCTGGAAAGGTAGTTTGGGTGACAGCTACATTCCCGTACATCGTTCTATTCATCCTCCT
CATCAGAGGAGCGATGCTTCCAGGAGCTTCCATTGGCATCAGTTATTATCTCAGTCCACA
GTGGCATCTACTTGCTAAACCAACTGTATGGCTGGAAGCAGCAACTCAGGTCTTCTTCTC
ACTGGGTCCTGGGTTTGGCACACTCATCGCATTATCAAGTTACAACAGATTTGACAACAA
CTGTTACAGAGATGCCTTCATCACAAGTGTTGTAAACTGCCTTACAAGTTTCATGGCTGG
GTTCGTTGTATTCTCAGTACTTGGCTACATGGCTCATTTATTGAATAAAACTGACATAGA
AGAAGTTACCACACCAGTAACTTTCACATATTCACCCACAGGAGTTGGTTTATTATTCGT
TGTATACGGACAAGCACTCACAACTTTTAGCGGATCGGTTTTCTTCTCCATAATCTTCTT
CCTGATGATCATAACACTTGGACTTGATAGCTCGTTTGGTGGGTTAGAAGCGGTCATTAC
TGGGTTTTCTGACGAGTATCCAGAAACGATTGGAAAACATCGGGAGAAATTTGTTCTTGG
GCTTCTTTCTGTCAGTTTTTTACTTGCCTTAGCTACTACTACTCAAGGGGGAGTCTACCT
GATGACATTGCTAGAGGTCTATGCTACAGGTCCTGCTATTATGACTGTTGTATTATTGGA
ATCAATATCTGTCACCTGGTTTTATGGTATAAATAGATTGTGTGAAGACATCAAAGCAAT
GCTTGGATTTGGACCTGGTATTTTCTGGCGAGTTTGCTGGACTGTGATAAGCCCCTTGTT
TGTTTCGTTCATGATCGTGATGAGTTTTATTTTCACATCAAATCTCCAATATGGGGATTA
CATCTTTCCTAATTGGTCAACATGGATAGGCTGGGCAATCACTCTTTCTTCCATCACTAT
AGTTCCAGTGTATGCTCTCTACAAATTCATTTTTGAGCCAGGTTCTCCACAGCAGCGCTG
CTTCTCATTACTAAGACCAGAAGTTGGAGGTCAAGCCCAGCCTCGAGAATCTCTTGCTAT
GACATCAGTTCCAGCCTAGTGATGTCATAATACATGTTGTAGATCACTACATGAGGCGTA
TTAATTACAAAACCTCAAAAGCCTAGATTCTTACACAAGCCAAGAAATTGTCAACTTTTA
ATTCAATATTGCTGCCAAAGCTGTTACAACGCCAATTTTACACAAGCTGTAAATTCAATT
GTTTTTCTTTGGAAGTTGTTAAAGTTCTTAAAATATGAAGCAATCTGTACAGAAACTTTG
TGTTCATGTATATACGACTGGTGCTCTTTATATTTGTCTTTGTTTAAAGTTCGTCATTTT
TACTAACGACTGATTTTTGAAAGATTCTCTTTTTGAAGCTTGCTGGTTAATGAAGCTGTG
TAAAATATTTCATGCCATATTATACGAGAA
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-469] 1.96E-129 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[1-491] 2.0E-194 |
| Pfam |
Na/ntran_symport (IPR000175) - T[1-470] 6.2E-174 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-474] 80.8 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[22-48] 1.6E-49 - T[144-161] 1.6E-49 - T[226-246] 1.6E-49 - T[289-308] 1.6E-49 - T[370-390] 1.6E-49 - T[410-430] 1.6E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 50.916 % | 533 | 0 |
| SC6A3_HUMAN | 47.39 % | 479 | 2.29E-164 |
| SC6A4_HUMAN | 52.772 % | 550 | 0 |