- Clone 'ciht008i13' >
- Clone 'citb2g9' >
- Region 'REG00000107' >
- Transcript 'KH2012:KH.C2.399.v1....' >
- Transcript 'KH2012:KH.C10.200.v2...'
Transcript Model
Transcript Id
KH2012:KH.C10.200.v2.A.nonSL10-1
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
KhC10 [4,408,677 / 4,415,372]
Amino acid sequence
Length: 512
>KH.C10.200.v2.A.nonSL10-1
LFYLELILGQYHRTGCISIWGKICPIFKGVGYAICLMALYVSSYYNTVIGWAVYYLYSSF
AYELPWATCNHSWTDSRCLDKINAAAHNQTWTNDTQSPAQQFFDRHVLEVYKSTGLGDLG
PPRWQIVLCLFVVYFILYFCLWKGVRSSGKVVWVTATFPYIVLFILLIRGAMLPGASIGI
SYYLSPQWHLLAKPTVWLEAATQVFFSLGPGFGTLIALSSYNRFDNNCYRDAFITSVVNC
LTSFMAGFVVFSVLGYMAHLLNKTDIEEVTTPVTFTYSPTGVGLLFVVYGQALTTFSGSV
FFSIIFFLMIITLGLDSSFGGLEAVITGFSDEYPETIGKHREKFVLGLLSVSFLLALATT
TQGGVYLMTLLEVYATGPAIMTVVLLESISVTWFYGINRLCEDIKAMLGFGPGIFWRVCW
TVISPLFVSFMIVMSFIFTSNLQYGDYIFPNWSTWIGWAITLSSITIVPVYALYKFIFEP
GSPQQRCFSLLRPEVGGQAQPRESLAMTSVPA
Nucleotide sequence
Length: 1,910
>KH2012:KH.C10.200.v2.A.nonSL10-1
CTATTCTATCTCGAGCTGATACTGGGTCAGTATCACCGAACGGGGTGCATTTCAATATGG
GGGAAGATTTGCCCGATTTTCAAAGGTGTGGGGTACGCGATTTGCTTGATGGCACTCTAT
GTGTCTAGTTACTACAACACAGTCATAGGATGGGCTGTGTATTACTTATACAGTTCATTT
GCATATGAGTTACCATGGGCAACCTGCAACCATTCATGGACTGACAGTCGATGTTTGGAT
AAAATAAACGCAGCTGCTCACAACCAGACGTGGACTAACGACACTCAGTCACCAGCGCAA
CAATTCTTCGATCGGCATGTACTTGAGGTTTACAAATCAACTGGGTTGGGAGATCTTGGT
CCACCAAGGTGGCAGATTGTGCTGTGTTTGTTCGTGGTTTATTTCATTCTATATTTCTGC
CTTTGGAAAGGAGTGAGGTCTTCTGGAAAGGTAGTTTGGGTGACAGCTACATTCCCGTAC
ATCGTTCTATTCATCCTCCTCATCAGAGGAGCGATGCTTCCAGGAGCTTCCATTGGCATC
AGTTATTATCTCAGTCCACAGTGGCATCTACTTGCTAAACCAACTGTATGGCTGGAAGCA
GCAACTCAGGTCTTCTTCTCACTGGGTCCTGGGTTTGGCACACTCATCGCATTATCAAGT
TACAACAGATTTGACAACAACTGTTACAGAGATGCCTTCATCACAAGTGTTGTAAACTGC
CTTACAAGTTTCATGGCTGGGTTCGTTGTATTCTCAGTACTTGGCTACATGGCTCATTTA
TTGAATAAAACTGACATAGAAGAAGTTACCACACCAGTAACTTTCACATATTCACCCACA
GGAGTTGGTTTATTATTCGTTGTATACGGACAAGCACTCACAACTTTTAGCGGATCGGTT
TTCTTCTCCATAATCTTCTTCCTGATGATCATAACACTTGGACTTGATAGCTCGTTTGGT
GGGTTAGAAGCGGTCATTACTGGGTTTTCTGACGAGTATCCAGAAACGATTGGAAAACAT
CGGGAGAAATTTGTTCTTGGGCTTCTTTCTGTCAGTTTTTTACTTGCCTTAGCTACTACT
ACTCAAGGGGGAGTCTACCTGATGACATTGCTAGAGGTCTATGCTACAGGTCCTGCTATT
ATGACTGTTGTATTATTGGAATCAATATCTGTCACCTGGTTTTATGGTATAAATAGATTG
TGTGAAGACATCAAAGCAATGCTTGGATTTGGACCTGGTATTTTCTGGCGAGTTTGCTGG
ACTGTGATAAGCCCCTTGTTTGTTTCGTTCATGATCGTGATGAGTTTTATTTTCACATCA
AATCTCCAATATGGGGATTACATCTTTCCTAATTGGTCAACATGGATAGGCTGGGCAATC
ACTCTTTCTTCCATCACTATAGTTCCAGTGTATGCTCTCTACAAATTCATTTTTGAGCCA
GGTTCTCCACAGCAGCGCTGCTTCTCATTACTAAGACCAGAAGTTGGAGGTCAAGCCCAG
CCTCGAGAATCTCTTGCTATGACATCAGTTCCAGCCTAGTGATGTCATAATACATGTTGT
AGATCACTACATGAGGCGTATTAATTACAAAACCTCAAAAGCCTAGATTCTTACACAAGC
CAAGAAATTGTCAACTTTTAATTCAATATTGCTGCCAAAGCTGTTACAACGCCAATTTTA
CACAAGCTGTAAATTCAATTGTTTTTCTTTGGAAGTTGTTAAAGTTCTTAAAATATGAAG
CAATCTGTACAGAAACTTTGTGTTCATGTATATACGACTGGTGCTCTTTATATTTGTCTT
TGTTTAAAGTTCGTCATTTTTACTAACGACTGATTTTTGAAAGATTCTCTTTTTGAAGCT
TGCTGGTTAATGAAGCTGTGTAAAATATTTCATGCCATATTATACGAGAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[1-498] 6.5E-198 |
| Pfam |
Na/ntran_symport (IPR000175) - T[1-477] 2.0E-177 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[1-476] 4.05E-132 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[1-481] 82.787 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[29-55] 1.8E-49 - T[151-168] 1.8E-49 - T[233-253] 1.8E-49 - T[296-315] 1.8E-49 - T[377-397] 1.8E-49 - T[417-437] 1.8E-49 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 51.205 % | 543 | 0 |
| SC6A3_HUMAN | 47.723 % | 489 | 3.33E-168 |
| SC6A4_HUMAN | 53.036 % | 560 | 0 |