- Transcript 'KH2012:KH.C10.351.v2...' >
- >
- Region 'REG00000104' >
- Transcript 'KH2012:KH.C10.351.v1...' >
- Transcript 'KH2012:KH.C10.200.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.200.v1.A.SL3-1
Possible name(s)
SLC6A2; SLC6A3; SLC6A4
Gene model
Location
KhC10 [4,408,677 / 4,419,112]
Amino acid sequence
Length: 726
>KH.C10.200.v1.A.SL3-1
SRFRVLIEKITNMNDFGGADPPVEKIGQENWDTFDCSPDPHTPRKASLLSAPGSLQTPQR
SNSFPVVHRFTVHNGDSNTLLNGGEAPKRRVSGYSTTSTEKAKDRKQSNQSTNGYGSPKY
RKESTMTNDSLPTSSSTYGLVSSSENKDKRLIPKQGSKSLEREQWGRKLEFLLSVIGFAV
DLGNVWRFPYICFRNGGGAFLIPYFLMIVFGGIPLFYLELILGQYHRTGCISIWGKICPI
FKGVGYAICLMALYVSSYYNTVIGWAVYYLYSSFAYELPWATCNHSWTDSRCLDKINAAA
HNQTWTNDTQSPAQQFFDRHVLEVYKSTGLGDLGPPRWQIVLCLFVVYFILYFCLWKGVR
SSGKVVWVTATFPYIVLFILLIRGAMLPGASIGISYYLSPQWHLLAKPTVWLEAATQVFF
SLGPGFGTLIALSSYNRFDNNCYRDAFITSVVNCLTSFMAGFVVFSVLGYMAHLLNKTDI
EEVTTPVTFTYSPTGVGLLFVVYGQALTTFSGSVFFSIIFFLMIITLGLDSSFGGLEAVI
TGFSDEYPETIGKHREKFVLGLLSVSFLLALATTTQGGVYLMTLLEVYATGPAIMTVVLL
ESISVTWFYGINRLCEDIKAMLGFGPGIFWRVCWTVISPLFVSFMIVMSFIFTSNLQYGD
YIFPNWSTWIGWAITLSSITIVPVYALYKFIFEPGSPQQRCFSLLRPEVGGQAQPRESLA
MTSVPA
Nucleotide sequence
Length: 2,617
>KH2012:KH.C10.200.v1.A.SL3-1
AGCAGCTGGAATCCGACACAATTTTAGAATGAAATTTTTATCGATTTAGGTTGAAACCCA
TTTAAAGTCGATTTAGAGTTCTTATTGAAAAAATCACCAATATGAACGATTTTGGCGGAG
CTGACCCGCCTGTGGAAAAGATTGGTCAAGAAAATTGGGACACGTTTGATTGCTCGCCCG
ATCCGCATACACCAAGGAAAGCGAGTCTTTTAAGCGCGCCTGGGAGCCTCCAAACCCCGC
AAAGATCGAACAGTTTCCCGGTCGTGCATCGATTTACAGTCCACAACGGTGATTCCAATA
CACTACTGAATGGTGGGGAAGCACCGAAACGGAGAGTATCTGGGTATTCGACAACATCAA
CGGAAAAGGCAAAAGACAGAAAGCAAAGCAACCAGAGCACAAACGGTTATGGCTCCCCAA
AATACCGCAAAGAGAGCACGATGACGAACGACAGTCTTCCCACCTCATCTTCCACATACG
GCCTTGTATCGTCGTCCGAAAACAAAGATAAGCGACTTATCCCAAAACAAGGTAGCAAAT
CCTTGGAACGTGAACAGTGGGGAAGAAAGTTGGAGTTTCTGCTTTCCGTAATCGGGTTCG
CTGTGGATTTAGGAAACGTGTGGAGGTTCCCGTACATTTGCTTTCGAAATGGCGGAGGTG
CGTTTTTGATTCCTTACTTCCTGATGATTGTCTTCGGGGGGATTCCCCTATTCTATCTCG
AGCTGATACTGGGTCAGTATCACCGAACGGGGTGCATTTCAATATGGGGGAAGATTTGCC
CGATTTTCAAAGGTGTGGGGTACGCGATTTGCTTGATGGCACTCTATGTGTCTAGTTACT
ACAACACAGTCATAGGATGGGCTGTGTATTACTTATACAGTTCATTTGCATATGAGTTAC
CATGGGCAACCTGCAACCATTCATGGACTGACAGTCGATGTTTGGATAAAATAAACGCAG
CTGCTCACAACCAGACGTGGACTAACGACACTCAGTCACCAGCGCAACAATTCTTCGATC
GGCATGTACTTGAGGTTTACAAATCAACTGGGTTGGGAGATCTTGGTCCACCAAGGTGGC
AGATTGTGCTGTGTTTGTTCGTGGTTTATTTCATTCTATATTTCTGCCTTTGGAAAGGAG
TGAGGTCTTCTGGAAAGGTAGTTTGGGTGACAGCTACATTCCCGTACATCGTTCTATTCA
TCCTCCTCATCAGAGGAGCGATGCTTCCAGGAGCTTCCATTGGCATCAGTTATTATCTCA
GTCCACAGTGGCATCTACTTGCTAAACCAACTGTATGGCTGGAAGCAGCAACTCAGGTCT
TCTTCTCACTGGGTCCTGGGTTTGGCACACTCATCGCATTATCAAGTTACAACAGATTTG
ACAACAACTGTTACAGAGATGCCTTCATCACAAGTGTTGTAAACTGCCTTACAAGTTTCA
TGGCTGGGTTCGTTGTATTCTCAGTACTTGGCTACATGGCTCATTTATTGAATAAAACTG
ACATAGAAGAAGTTACCACACCAGTAACTTTCACATATTCACCCACAGGAGTTGGTTTAT
TATTCGTTGTATACGGACAAGCACTCACAACTTTTAGCGGATCGGTTTTCTTCTCCATAA
TCTTCTTCCTGATGATCATAACACTTGGACTTGATAGCTCGTTTGGTGGGTTAGAAGCGG
TCATTACTGGGTTTTCTGACGAGTATCCAGAAACGATTGGAAAACATCGGGAGAAATTTG
TTCTTGGGCTTCTTTCTGTCAGTTTTTTACTTGCCTTAGCTACTACTACTCAAGGGGGAG
TCTACCTGATGACATTGCTAGAGGTCTATGCTACAGGTCCTGCTATTATGACTGTTGTAT
TATTGGAATCAATATCTGTCACCTGGTTTTATGGTATAAATAGATTGTGTGAAGACATCA
AAGCAATGCTTGGATTTGGACCTGGTATTTTCTGGCGAGTTTGCTGGACTGTGATAAGCC
CCTTGTTTGTTTCGTTCATGATCGTGATGAGTTTTATTTTCACATCAAATCTCCAATATG
GGGATTACATCTTTCCTAATTGGTCAACATGGATAGGCTGGGCAATCACTCTTTCTTCCA
TCACTATAGTTCCAGTGTATGCTCTCTACAAATTCATTTTTGAGCCAGGTTCTCCACAGC
AGCGCTGCTTCTCATTACTAAGACCAGAAGTTGGAGGTCAAGCCCAGCCTCGAGAATCTC
TTGCTATGACATCAGTTCCAGCCTAGTGATGTCATAATACATGTTGTAGATCACTACATG
AGGCGTATTAATTACAAAACCTCAAAAGCCTAGATTCTTACACAAGCCAAGAAATTGTCA
ACTTTTAATTCAATATTGCTGCCAAAGCTGTTACAACGCCAATTTTACACAAGCTGTAAA
TTCAATTGTTTTTCTTTGGAAGTTGTTAAAGTTCTTAAAATATGAAGCAATCTGTACAGA
AACTTTGTGTTCATGTATATACGACTGGTGCTCTTTATATTTGTCTTTGTTTAAAGTTCG
TCATTTTTACTAACGACTGATTTTTGAAAGATTCTCTTTTTGAAGCTTGCTGGTTAATGA
AGCTGTGTAAAATATTTCATGCCATATTATACGAGAA
| PANTHER |
Na/ntran_symport (IPR000175) - T[146-715] 2.2E-238 |
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[161-695] 102.122 |
| Pfam |
Na/ntran_symport (IPR000175) - T[162-691] 9.4E-212 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[162-690] 2.75E-163 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[170-191] 9.9E-74 - T[199-218] 9.9E-74 - T[243-269] 9.9E-74 - T[365-382] 9.9E-74 - T[447-467] 9.9E-74 - T[510-529] 9.9E-74 - T[591-611] 9.9E-74 - T[631-651] 9.9E-74 |
| ProSitePatterns |
Na/ntran_symport (IPR000175) - T[186-200] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC6A2_HUMAN | 50.168 % | 637 | 0 |
| SC6A3_HUMAN | 50 % | 580 | 0 |
| SC6A4_HUMAN | 52.562 % | 667 | 0 |