Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C10.2.v1.A.ND3-1

Possible name(s)

MARK1; MARK2; MARK3

Gene model

KH2012:KH.C10.2

Location

KhC10 [2,146,041 / 2,151,965]

Sequences

Amino acid sequence

Length: 322

>KH.C10.2.v1.A.ND3-1
ELVGTLYLFHYQSDDIMKISVKYVLHKIISLMFRAKQALLASTAANPNKAEIPSNQRPET
AKTWKNNDMTRRNTYVCTDRKGDKAARTLPPETSSASPGKQSSPVIRTTSIAPGARSSIH
ARHSQTSATPFPRNARERRTYHGPQTQERTRRTATYNGPPPPTSPSVSECMPGAMASGRD
SNTTSRGGPSGSREGASGFLSKLSSKFNRSTSRGVPEAEKDSKPRSLRFTWSMKTTSAME
PKEMMKEIRKVLDANSCDYEQREKYLLFCVNGHGHADNLVQWEMEVCKLPRLSLNGVRFK
RISGTSIAFKNIASKIANELKL

Nucleotide sequence

Length: 1,956

>KH2012:KH.C10.2.v1.A.ND3-1
CTTACAACCCTGGTAGGAAATAATTTTCCTTTATCTTTATGCAAGTCCCAATATTTAGTA
CTAGGGCTATACCTATATACGTTGAATCCACAGCTCATTTATTAATAATAACTTGCTCAA
CTGCACCAGTGTAATATATATATATATACTGTAATATACTTGGTATAAAATTGGTATACT
CTCGGCGACAACTGATGTTCATTAACGCTGTTTGGGAAACCCTGGTTCACATGCAAATGC
CTCGGTTCATTTACAACAAAAAAATCTTGCAATAAGAATTGGTTGGGACACTTTACCTTT
TTCATTACCAGTCAGATGATATAATGAAAATTTCAGTGAAATATGTATTACATAAAATAA
TTTCACTTATGTTCAGAGCCAAACAAGCACTTCTAGCCTCCACGGCAGCCAACCCAAACA
AAGCAGAAATCCCGAGTAACCAGAGACCCGAGACAGCCAAGACATGGAAAAATAACGACA
TGACTCGTAGAAACACATATGTTTGCACTGATAGAAAAGGAGATAAAGCAGCTCGTACAT
TACCACCAGAAACAAGCAGTGCATCACCTGGGAAGCAATCCTCACCTGTGATCCGAACGA
CTAGCATCGCTCCAGGAGCCCGTTCGTCAATCCACGCTCGTCATAGCCAGACATCGGCGA
CACCGTTCCCACGGAATGCACGAGAGCGCCGGACCTACCACGGACCCCAGACACAAGAGC
GCACCCGGCGCACTGCGACCTACAACGGCCCGCCACCACCCACCTCTCCCTCTGTGAGTG
AGTGCATGCCAGGTGCCATGGCTTCAGGCCGCGACTCCAACACCACATCCAGAGGTGGGC
CATCTGGGTCACGGGAAGGTGCCAGTGGATTTTTGAGCAAGCTGTCATCCAAATTCAACA
GAAGCACCAGCAGAGGCGTCCCCGAAGCCGAGAAAGATTCAAAACCTCGATCTCTTCGTT
TTACTTGGTCAATGAAAACAACATCAGCCATGGAACCGAAAGAAATGATGAAGGAAATTA
GAAAGGTTCTGGATGCAAACAGTTGCGATTATGAACAGAGAGAAAAATATCTTTTATTCT
GTGTAAATGGACATGGTCACGCTGATAACCTCGTACAATGGGAAATGGAAGTTTGCAAGT
TGCCTCGTCTTTCACTTAATGGTGTCCGCTTCAAGAGAATATCGGGCACAAGCATAGCTT
TCAAAAACATTGCCTCAAAAATTGCAAATGAGTTGAAACTTTGAACCAAATTCTCTACCA
AGCGTCTAACTCAGCAATCTGCTGCAACTAGTAAAAGAATTAAAACTCACGTATACCGGT
TTCGCTTCTAGTAGCGAAAGTCGACTGTAGAAACCATTTTAATGGCACTCGCTTCAGTAC
TGTTTGTCCATTTTGTTCAGTTTTTTAAACATGCCTTTTTGATGGACCAGCAACTTTTTC
ATTTCGTATTATCAAGTGACTTTTGTTGCAATGAGGTTGAGTCGACTATCCCTGACCAGC
ACACTTAAGCTGCAAGAGATGTTTCCTTGATTGTGTTCGATTCCTCTCTAGCTATGTAGT
GCAAGCAAATCTATTATTCTTAATATTTTTTTCCTAATGCGAATGGCAGCGGTGTAACGC
TGCGTATTTAGAATCCGCTTAGACAAATTTTGCCCCACCTTTGTACACTCTGGTATATGA
CGAGAGGCGTCATATCAAAAAGCGATCATTGCTGTCCTGAACCCTATTCTCTTGCTGCAT
AATGATTTTGCCAACGTTTGTAGTATTCGCCTCTCTCCTTTTCCCTGTGAGAGAATCGCC
GCTCTCTATTTCCCCCATATTGGAATCCACAGCCTGGTGTCATTCGGCGATCGAAGCTTG
AACATCTAACGTCACACGTTAATGATGACGTCATTGTAACCAAGCTTTTTAGGGTTGTAC
AAACTCGGTGCAAGTGTGGTACATGTTGTTCAGTAA

InterProScan

PANTHER	MARK3 (IPR033628) - T[40-322] 3.3E-81
PANTHER	MARK/par1 (IPR033624) - T[40-322] 3.3E-81
SUPERFAMILY	KA1/Ssp2_C (IPR028375) - T[212-322] 9.65E-46
ProSiteProfiles	KA1_dom (IPR001772) - T[273-322] 18.239
Pfam	KA1_dom (IPR001772) - T[280-322] 4.0E-21

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
MARK2_HUMAN	45.185 %	184	1.13E-52
MARK3_HUMAN	52.98 %	267	9.22E-84
MARK1_HUMAN	44.959 %	237	3.49E-72