- Transcript 'KH2012:KH.C10.192.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.192.v1.A.SL1-1
Possible name(s)
CD9; TSPAN2; TSPAN8
Gene model
Location
KhC10 [558,285 / 564,927]
Amino acid sequence
Length: 257
>KH.C10.192.v1.A.SL1-1
ITVLLHIGINMGCCSGIIKYLLFLFNVLFWIAGGAVLGIGIYLLVANNVQAVVQVAGIQF
YYAGCYVLISVGCVMFVVGFFGCCGAIKENKCLLGTYFTCLLIIFLAQVGIGIWALVSQS
SIETEIKKGLNSTLPLDYSKSDAYANTVVAVQQSFKCCGLVTGCTDWIGGNTTGCSCTPV
ITNSTVCAVPSSGTCINGDTPGGAIYTSDCYDAIIKFINDNIYLIAGIGLGIGLAEIFGM
IFALVMCRSEKSGYETY
Nucleotide sequence
Length: 991
>KH2012:KH.C10.192.v1.A.SL1-1
ATTAATTAAATTACAGTTTTGTTACACATTGGTATCAATATGGGCTGTTGTTCTGGAATC
ATTAAGTACCTGCTGTTTCTGTTTAACGTCCTCTTCTGGATTGCAGGTGGTGCAGTTCTT
GGCATTGGTATTTACTTGTTAGTAGCAAACAATGTTCAAGCTGTTGTACAAGTCGCTGGT
ATCCAGTTTTACTACGCAGGATGTTACGTTCTTATCTCTGTGGGTTGTGTTATGTTCGTG
GTCGGTTTCTTTGGATGTTGTGGAGCTATTAAGGAAAACAAATGTCTTCTCGGCACGTAT
TTTACTTGCTTGCTGATCATTTTCCTCGCTCAAGTCGGTATTGGCATATGGGCTCTCGTG
TCGCAATCATCGATTGAAACCGAAATTAAGAAAGGCTTGAACTCCACATTACCACTGGAC
TACAGCAAAAGTGACGCTTATGCCAACACCGTTGTTGCTGTTCAACAGAGCTTCAAATGT
TGTGGATTGGTCACCGGTTGTACGGATTGGATTGGAGGAAACACCACCGGTTGTTCGTGC
ACCCCTGTTATCACCAACAGCACTGTGTGTGCAGTGCCATCTAGCGGAACTTGTATAAAT
GGTGACACGCCGGGAGGTGCTATCTACACCTCGGATTGTTACGATGCCATTATAAAGTTC
ATCAACGACAACATATACTTGATAGCAGGGATTGGGCTTGGCATTGGTTTGGCTGAGATA
TTCGGGATGATATTCGCCTTGGTAATGTGTAGGTCGGAAAAAAGCGGTTACGAAACATAT
TAAGAGATGGAAGCTACCAAATGAATGAACATTTAGTTCACAATGGTGGCAAAAAAAACT
ACATTTGCACATCACCAGCTATATATATATAATGTACCACCTAACATATACGAAGCAATC
TTATATTTCAGTGCCTTTTAATTCGGCCAAGTAATCATGTTCATAATTTTTAATTATCAT
CAATTTATTACAACATTTTACTCCTCGAAAA
| PIRSF |
Tetraspanin (IPR000301) - T[9-257] 1.4E-54 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[18-248] 7.2E-50 |
| PRINTS |
Tetraspanin (IPR000301) - T[20-43] 3.3E-48 - T[61-87] 3.3E-48 - T[88-116] 3.3E-48 - T[224-250] 3.3E-48 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[72-94] . |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[117-195] 8.4E-8 |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[119-221] 1.28E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CD81_HUMAN | 33.195 % | 131 | 1.66E-37 |
| CD9_HUMAN | 31.12 % | 124 | 6.73E-35 |
| TSN2_HUMAN | 32.203 % | 119 | 5.1E-33 |