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TRANSCRIPT CARD

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  1. Clone 'cien125108'
  2. Transcript 'KH2012:KH.C10.192.v1...'

Transcript Model

Transcript Id

KH2012:KH.C10.192.v1.A.SL1-1

Possible name(s)

CD9; TSPAN2; TSPAN8

Location

KhC10 [558,285 / 564,927]

Sequences

Amino acid sequence

Length: 257

>KH.C10.192.v1.A.SL1-1
ITVLLHIGINMGCCSGIIKYLLFLFNVLFWIAGGAVLGIGIYLLVANNVQAVVQVAGIQF
YYAGCYVLISVGCVMFVVGFFGCCGAIKENKCLLGTYFTCLLIIFLAQVGIGIWALVSQS
SIETEIKKGLNSTLPLDYSKSDAYANTVVAVQQSFKCCGLVTGCTDWIGGNTTGCSCTPV
ITNSTVCAVPSSGTCINGDTPGGAIYTSDCYDAIIKFINDNIYLIAGIGLGIGLAEIFGM
IFALVMCRSEKSGYETY

Nucleotide sequence

Length: 991

>KH2012:KH.C10.192.v1.A.SL1-1
ATTAATTAAATTACAGTTTTGTTACACATTGGTATCAATATGGGCTGTTGTTCTGGAATC
ATTAAGTACCTGCTGTTTCTGTTTAACGTCCTCTTCTGGATTGCAGGTGGTGCAGTTCTT
GGCATTGGTATTTACTTGTTAGTAGCAAACAATGTTCAAGCTGTTGTACAAGTCGCTGGT
ATCCAGTTTTACTACGCAGGATGTTACGTTCTTATCTCTGTGGGTTGTGTTATGTTCGTG
GTCGGTTTCTTTGGATGTTGTGGAGCTATTAAGGAAAACAAATGTCTTCTCGGCACGTAT
TTTACTTGCTTGCTGATCATTTTCCTCGCTCAAGTCGGTATTGGCATATGGGCTCTCGTG
TCGCAATCATCGATTGAAACCGAAATTAAGAAAGGCTTGAACTCCACATTACCACTGGAC
TACAGCAAAAGTGACGCTTATGCCAACACCGTTGTTGCTGTTCAACAGAGCTTCAAATGT
TGTGGATTGGTCACCGGTTGTACGGATTGGATTGGAGGAAACACCACCGGTTGTTCGTGC
ACCCCTGTTATCACCAACAGCACTGTGTGTGCAGTGCCATCTAGCGGAACTTGTATAAAT
GGTGACACGCCGGGAGGTGCTATCTACACCTCGGATTGTTACGATGCCATTATAAAGTTC
ATCAACGACAACATATACTTGATAGCAGGGATTGGGCTTGGCATTGGTTTGGCTGAGATA
TTCGGGATGATATTCGCCTTGGTAATGTGTAGGTCGGAAAAAAGCGGTTACGAAACATAT
TAAGAGATGGAAGCTACCAAATGAATGAACATTTAGTTCACAATGGTGGCAAAAAAAACT
ACATTTGCACATCACCAGCTATATATATATAATGTACCACCTAACATATACGAAGCAATC
TTATATTTCAGTGCCTTTTAATTCGGCCAAGTAATCATGTTCATAATTTTTAATTATCAT
CAATTTATTACAACATTTTACTCCTCGAAAA

InterProScan

PIRSF
Tetraspanin (IPR000301) - T[9-257] 1.4E-54
Pfam
Tetraspanin/Peripherin (IPR018499) - T[18-248] 7.2E-50
PRINTS
Tetraspanin (IPR000301) - T[20-43] 3.3E-48 - T[61-87] 3.3E-48 - T[88-116] 3.3E-48 - T[224-250] 3.3E-48
ProSitePatterns
Tetraspanin_CS (IPR018503) - T[72-94] .
Gene3D
Tetraspanin_EC2_sf (IPR008952) - T[117-195] 8.4E-8
SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[119-221] 1.28E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CD81_HUMAN 33.195 % 131 1.66E-37
CD9_HUMAN 31.12 % 124 6.73E-35
TSN2_HUMAN 32.203 % 119 5.1E-33