- Clone 'cima836893' >
- Transcript 'KH2012:KH.C10.183.v2...'
Transcript Model
Transcript Id
KH2012:KH.C10.183.v2.A.SL2-1
Possible name(s)
ADAMTS9; HMCN1; SEMA5B
Gene model
Location
KhC10 [3,766,599 / 3,769,847]
Amino acid sequence
Length: 238
>KH.C10.183.v2.A.SL2-1
HSQYRRHMERYCAKTCCLERNQNDFAQWSPWSKCSKDCGVGEQRRQRRCRNRNSCRRNDV
QRRRCQGDFCGRTLVISDWTDCTATCGGGERLRPQNCSVTNTTTSCVPFIVEACATQPCA
VENSTSQVDSAGQTNQTRTPEWGEWSICSATCGLGVRIRQRACDIESSDGCTISETGSCQ
GIFCPGTWSAWSVWSTCTRTCGTGTANRLRTCLDGLVCTGLTGDLRYCGTTPCAGNPT
Nucleotide sequence
Length: 892
>KH2012:KH.C10.183.v2.A.SL2-1
TCATTCACAATACAGAAGACATATGGAAAGGTACTGCGCGAAAACATGCTGTCTTGAAAG
AAATCAAAACGATTTCGCTCAGTGGTCACCTTGGTCTAAATGTTCTAAAGATTGCGGGGT
CGGGGAACAACGACGGCAGAGAAGATGCCGAAATCGAAACTCCTGTCGTCGTAACGATGT
ACAGCGTCGAAGGTGCCAAGGTGATTTCTGTGGTAGAACATTAGTTATAAGCGATTGGAC
AGACTGCACGGCCACGTGTGGTGGAGGGGAGCGGTTAAGACCGCAGAACTGTAGCGTAAC
CAACACTACGACAAGTTGTGTTCCGTTTATCGTAGAAGCTTGCGCAACGCAACCTTGTGC
GGTGGAGAACAGCACGTCGCAAGTTGATTCTGCTGGTCAAACAAACCAAACGCGAACTCC
AGAATGGGGCGAATGGTCGATCTGTTCCGCGACTTGTGGGTTGGGGGTGCGAATTCGACA
GCGCGCATGTGACATCGAAAGCTCGGACGGCTGCACGATAAGTGAGACAGGTTCATGCCA
AGGAATATTCTGCCCTGGAACTTGGTCAGCTTGGTCCGTATGGAGCACCTGCACTAGAAC
TTGTGGCACTGGGACGGCGAACAGACTTAGAACATGCTTGGACGGATTAGTGTGTACCGG
GTTAACAGGCGATCTCCGATATTGTGGAACTACGCCATGTGCAGGCAACCCTACTTGAAA
TAAAAGAAGCCCAATACAAATATTTTAGTATTTTCTCGAAATGATGACAACGAAATTTTA
TTTGTTTATGTATTGTTCATATTTATAAGTTCTGACTGTTTGTGCGAATTTATTTCTGCA
TTTCACGAATTTGTGTTACGAATACATTTGGTGAATACACAAAAAATACAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[2-72] 1.5E-8 - T[73-123] 5.1E-6 - T[124-185] 2.4E-9 - T[186-233] 1.1E-8 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[22-71] 11.01 - T[136-180] 8.82 - T[185-234] 11.267 |
| SMART |
TSP1_rpt (IPR000884) - T[25-71] 2.1E-4 - T[73-120] 0.04 - T[139-185] 1.2E-5 - T[188-234] 8.2E-8 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[26-65] 2.22E-8 - T[76-119] 3.79E-6 - T[140-170] 4.05E-8 - T[184-233] 3.01E-9 |
| Pfam |
TSP1_rpt (IPR000884) - T[27-70] 1.4E-7 - T[77-119] 6.6E-5 - T[141-169] 2.7E-8 - T[189-233] 4.3E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 29.07 % | 77 | 3.83E-16 |
| SEM5B_HUMAN | 30.112 % | 78.6 | 1.19E-16 |