- Transcript 'KH2012:KH.C10.183.v1...'
Transcript Model
Transcript Id
KH2012:KH.C10.183.v1.A.SL3-1
Possible name(s)
ADAMTS9; HMCN1; SEMA5B
Gene model
Location
KhC10 [3,758,638 / 3,769,847]
Amino acid sequence
Length: 1,036
>KH.C10.183.v1.A.SL3-1
FFYIKMHSYSVVLLSLLSVFYIFHPWTGVSCQLLPRHTPTASDCVDQYGWCIFEFRSCGY
TTVAIGCRRTCNNCYCNAVQYGCEHFCTNNGSSVNCICRTGYRLHRNGRNCTDIDECVNH
PCSRTEYCVNTPGSYYCSSEFVCPNANTYQYYLQERCCRINDAACGQNPLTGSGVDLVGP
NQILTQWPWTVFLHIGNKVCTGVLVLQNWIIVPSRCFSGWRSGQTLSATFGAREVSTGTT
TGQHPQTINLAEVYRHPSYSFPHYDIAVAHLDNGIRNTDSVKPICLPFGEVPPDGVKCFL
VGYEAEVSNGALVRVRKDIAMNVTSIEECRRNVINGHQVENNMICAKYDPQQLGACVAES
GGPLMCQRCTSCNWYVAGIFTFGDVCVKRNSYAAFTSVEPYEGWLSNRTGITIQKDKSCG
ARIPVWRPWTSWSTCDTSCGDVGQRTRSRICWNGNPGDAGCLGNSTEISRCNIRPCPRWT
FDNSWSSCSRSCGGGILTRVATCINGQRGDPGCDFPIPRNTLPCNQHFCPTWSDWSPWTR
CSSTCGTTGTQRATRVCHGTGGCNGLTERIKTCNRITCPVWSTWSSWTECPRTCGGGVIT
SRRVCEVGTCPGSYIRTDSCASQRCPVCEDWERWSSCSRSCGPGRRIRERQCSADSATEH
NTREEEACNAKQCSVWGTWQSWSSCTEACGRGRKSRVRSCLNGRDCRGRPRENRTCYGTS
CPGVWSRWSSWGDCSNTCGVGVKTRQRDCTRRGSSNGPCVGSNNQTKSCTGSSCRGECSS
LTNNPRANFCERFARYCSHSQYRRHMERYCAKTCCLERNQNDFAQWSPWSKCSKDCGVGE
QRRQRRCRNRNSCRRNDVQRRRCQGDFCGRTLVISDWTDCTATCGGGERLRPQNCSVTNT
TTSCVPFIVEACATQPCAVENSTSQVDSAGQTNQTRTPEWGEWSICSATCGLGVRIRQRA
CDIESSDGCTISETGSCQGIFCPGTWSAWSVWSTCTRTCGTGTANRLRTCLDGLVCTGLT
GDLRYCGTTPCAGNPT
Nucleotide sequence
Length: 3,296
>KH2012:KH.C10.183.v1.A.SL3-1
AGATGAATTAGTTTTTCTACATAAAAATGCACAGTTATTCTGTTGTGCTCCTCAGCCTCT
TGTCTGTTTTCTACATATTTCACCCATGGACAGGAGTATCCTGTCAATTGCTACCAAGAC
ATACACCCACAGCGTCCGATTGTGTAGACCAATATGGATGGTGTATCTTTGAATTTCGAA
GTTGTGGATACACAACTGTTGCGATTGGATGTCGCAGAACGTGCAACAACTGCTACTGTA
ATGCGGTGCAATACGGATGCGAACACTTCTGTACTAATAATGGCTCAAGTGTTAACTGCA
TATGCCGAACGGGTTATAGGTTACACAGAAATGGCAGAAACTGTACAGATATAGATGAAT
GCGTAAATCACCCTTGTTCGCGTACTGAATATTGCGTAAACACGCCTGGCAGTTACTATT
GTTCAAGCGAGTTTGTTTGCCCTAACGCCAACACTTACCAGTACTACCTTCAAGAACGCT
GCTGCCGGATAAATGACGCTGCCTGTGGCCAAAACCCCCTTACTGGATCCGGGGTAGACC
TGGTTGGACCGAATCAAATCCTTACGCAGTGGCCCTGGACAGTGTTTCTGCATATTGGAA
ACAAAGTGTGTACCGGTGTACTTGTCCTACAAAATTGGATTATTGTACCGTCACGTTGTT
TCAGCGGTTGGCGATCCGGACAAACACTAAGTGCAACTTTTGGCGCCCGCGAAGTCAGTA
CGGGTACTACTACTGGACAGCATCCCCAAACAATTAACTTAGCTGAGGTATACAGACACC
CAAGTTATTCTTTCCCTCACTATGATATAGCGGTCGCACATTTGGACAACGGCATTCGAA
ACACAGATTCAGTAAAACCGATTTGTCTTCCTTTTGGGGAAGTCCCGCCCGACGGTGTAA
AATGTTTTCTTGTGGGTTACGAAGCCGAAGTTTCGAATGGAGCGCTCGTGCGTGTGAGAA
AAGACATCGCAATGAATGTAACATCAATAGAAGAATGCAGACGGAACGTTATTAACGGTC
ATCAAGTTGAAAACAACATGATTTGTGCAAAGTACGATCCCCAACAGCTCGGGGCTTGCG
TTGCCGAGTCGGGAGGACCACTTATGTGCCAAAGATGTACATCCTGTAACTGGTATGTGG
CTGGCATCTTTACGTTTGGTGATGTATGTGTTAAGCGTAACAGCTACGCTGCGTTTACAT
CTGTTGAACCTTATGAAGGATGGCTTAGTAATCGTACTGGAATAACAATACAAAAAGATA
AATCATGTGGCGCAAGAATACCAGTTTGGCGGCCTTGGACATCTTGGTCGACTTGTGACA
CGTCATGTGGTGACGTCGGACAGAGGACTCGATCACGTATCTGTTGGAATGGTAACCCTG
GTGACGCTGGTTGTCTTGGCAACTCCACAGAAATATCAAGATGCAACATAAGACCTTGCC
CAAGATGGACCTTCGATAACTCATGGAGCTCATGCTCTCGTTCTTGCGGAGGTGGGATAC
TTACTAGAGTAGCGACATGTATTAACGGGCAACGGGGTGACCCAGGATGTGATTTTCCAA
TCCCTAGAAATACATTGCCATGCAACCAACATTTTTGTCCCACATGGAGCGATTGGTCAC
CATGGACTCGGTGCTCGTCCACTTGCGGTACAACTGGCACCCAACGAGCTACTAGAGTTT
GCCATGGAACTGGGGGTTGCAATGGACTTACTGAGAGAATAAAAACTTGCAACCGAATTA
CATGCCCTGTGTGGAGTACTTGGTCATCATGGACTGAGTGTCCACGAACATGCGGTGGCG
GTGTCATAACATCTCGAAGAGTATGCGAAGTCGGAACTTGCCCAGGTTCTTACATACGGA
CAGATTCATGTGCTTCTCAACGCTGCCCTGTCTGCGAAGACTGGGAGCGATGGAGTTCAT
GCAGTCGCTCATGTGGTCCCGGTAGACGAATCCGAGAAAGGCAGTGCTCTGCCGACTCTG
CGACAGAACACAATACTCGTGAGGAAGAAGCATGCAATGCAAAACAATGCTCAGTTTGGG
GGACGTGGCAGTCTTGGTCATCGTGTACGGAAGCTTGCGGTCGGGGACGAAAATCAAGAG
TAAGAAGCTGTTTGAATGGTCGAGATTGCAGAGGCAGACCTAGGGAGAATAGAACTTGTT
ATGGAACAAGTTGCCCAGGGGTTTGGTCCCGTTGGAGCAGTTGGGGTGATTGTTCCAATA
CTTGTGGGGTAGGTGTCAAAACTCGACAGAGAGACTGTACTAGACGAGGATCTTCAAATG
GACCGTGTGTGGGGAGTAACAACCAAACAAAGAGTTGTACTGGTTCTTCCTGCAGAGGTG
AGTGTTCTTCACTCACAAATAACCCAAGAGCTAACTTTTGTGAACGGTTCGCTCGGTACT
GCAGTCATTCACAATACAGAAGACATATGGAAAGGTACTGCGCGAAAACATGCTGTCTTG
AAAGAAATCAAAACGATTTCGCTCAGTGGTCACCTTGGTCTAAATGTTCTAAAGATTGCG
GGGTCGGGGAACAACGACGGCAGAGAAGATGCCGAAATCGAAACTCCTGTCGTCGTAACG
ATGTACAGCGTCGAAGGTGCCAAGGTGATTTCTGTGGTAGAACATTAGTTATAAGCGATT
GGACAGACTGCACGGCCACGTGTGGTGGAGGGGAGCGGTTAAGACCGCAGAACTGTAGCG
TAACCAACACTACGACAAGTTGTGTTCCGTTTATCGTAGAAGCTTGCGCAACGCAACCTT
GTGCGGTGGAGAACAGCACGTCGCAAGTTGATTCTGCTGGTCAAACAAACCAAACGCGAA
CTCCAGAATGGGGCGAATGGTCGATCTGTTCCGCGACTTGTGGGTTGGGGGTGCGAATTC
GACAGCGCGCATGTGACATCGAAAGCTCGGACGGCTGCACGATAAGTGAGACAGGTTCAT
GCCAAGGAATATTCTGCCCTGGAACTTGGTCAGCTTGGTCCGTATGGAGCACCTGCACTA
GAACTTGTGGCACTGGGACGGCGAACAGACTTAGAACATGCTTGGACGGATTAGTGTGTA
CCGGGTTAACAGGCGATCTCCGATATTGTGGAACTACGCCATGTGCAGGCAACCCTACTT
GAAATAAAAGAAGCCCAATACAAATATTTTAGTATTTTCTCGAAATGATGACAACGAAAT
TTTATTTGTTTATGTATTGTTCATATTTATAAGTTCTGACTGTTTGTGCGAATTTATTTC
TGCATTTCACGAATTTGTGTTACGAATACATTTGGTGAATACACAAAAAATACAAA
| Pfam |
cEGF (IPR026823) - T[95-116] 2.1E-7 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[113-137] . |
| SUPERFAMILY |
Peptidase_S1_PA (IPR009003) - T[152-410] 4.93E-46 |
| SMART |
Trypsin_dom (IPR001254) - T[176-405] 5.4E-21 |
| ProSiteProfiles |
Trypsin_dom (IPR001254) - T[177-410] 22.679 |
| Pfam |
Trypsin_dom (IPR001254) - T[185-405] 5.3E-36 |
| CDD |
Trypsin_dom (IPR001254) - T[186-407] 5.15831E-33 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[423-477] 11.787 - T[529-577] 10.45 - T[578-626] 11.712 - T[628-672] 9.025 - T[673-720] 11.33 - T[722-775] 12.514 - T[820-869] 11.01 - T[934-978] 8.82 - T[983-1032] 11.267 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[424-476] 9.29E-9 - T[475-525] 1.24E-7 - T[531-578] 3.66E-6 - T[578-620] 8.76E-7 - T[625-669] 1.7E-6 - T[675-721] 5.89E-7 - T[721-769] 6.41E-9 - T[823-868] 3.92E-8 - T[874-917] 2.75E-5 - T[938-965] 2.88E-7 - T[982-1031] 2.35E-8 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[424-476] 1.1E-8 - T[478-530] 1.2E-7 - T[531-578] 7.5E-6 - T[580-624] 3.6E-6 - T[625-674] 1.1E-6 - T[675-721] 3.2E-6 - T[722-774] 2.1E-10 - T[820-868] 3.9E-7 - T[869-921] 2.9E-5 - T[922-983] 1.9E-8 - T[984-1031] 7.8E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[426-477] 8.7E-6 - T[479-530] 4.8E-6 - T[532-579] 1.5E-4 - T[581-626] 1.3E-6 - T[628-674] 1.4E-5 - T[676-722] 1.9E-7 - T[725-775] 6.6E-9 - T[823-869] 2.1E-4 - T[871-918] 0.04 - T[937-983] 1.2E-5 - T[986-1032] 8.2E-8 |
| Pfam |
TSP1_rpt (IPR000884) - T[428-476] 1.3E-6 - T[484-529] 0.0095 - T[533-578] 6.0E-5 - T[582-625] 4.1E-4 - T[630-673] 4.9E-6 - T[678-721] 0.061 - T[726-774] 1.5E-8 - T[825-868] 9.7E-7 - T[875-917] 4.6E-4 - T[939-967] 1.8E-7 - T[987-1031] 3.1E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 34.262 % | 155 | 5.77E-38 |
| SEM5B_HUMAN | 29.854 % | 122 | 4.27E-28 |
| ATS9_HUMAN | 27.446 % | 120 | 1.59E-27 |