Aniseed - Transcript Card

Transcript 'KH2012:KH.C10.159.v3...'

Transcript Model

Transcript Id

KH2012:KH.C10.159.v3.A.ND1-1

Possible name(s)

ACP2; ACP6; PXYLP1

Gene model

KH2012:KH.C10.159

Location

KhC10 [3,821,408 / 3,824,318]

Sequences

Amino acid sequence

Length: 420

>KH.C10.159.v3.A.ND1-1
FTLNYPLNIILFLVKAKQLNTDHSYKLESEKGNGQKGWKLKQVQIVIRHGDRAPLNLNVY
HKFRTKNRFCNIHSNFYSDTLKLVSNYRNSIMKDQNSQHLPYFAQPLPEGIVCSPGQLTV
IGALQHLHNGLMLREAYIRKHKLVDPATQDKFVYVRSTHVRRTFQSAVAFLYGFLPNYHL
QDIPITFTMGPTFCEKHCVCPIVKTLEKKVKKTQYQNYLKRQRNNPIIKNISRITGIGDH
TGPLMDSLVTGYICKQIPLPCNENGECVELSELNVVMNEQEYLNRVTRLESPARNISLLQ
IQPFLENITNHMKQVVEDSAAQRKAVLYSGHDLTLAPLIQALGLPEYRWPRLASRLVFEL
WQATDGMHFVKILFNGVDVTNDTAFCPGKNKPCSYNSFMQFQRDIGKYFGFDSRSSVCKS

Nucleotide sequence

Length: 1,821

>KH2012:KH.C10.159.v3.A.ND1-1
TTTGATAATCAACTAAAATAATGTTGTGAAATAAAAGCATACGACAGGCCACAGCCTGAA
TATGAAGAAAGCCTCTACAAAATGGATGCTATTTGCAACTGCCCTTATTTCCATATTCTT
AGTAACAATGTGGACTTTGCAATATCGTTCCAAAGATCATTGTAAAATGTGTTTTAAATT
AATAGATTATGTGTTACAAAGTGTGTTCATACTATACTGACTGTTCTATTTGTTCTTAGG
TCTAGTTCTTAATATCCTTTATTGTAACTAATAATTTACTCTGAATTACCCTTTAAACAT
TATTTTATTTTTAGTTAAAGCAAAACAGCTAAATACAGATCATTCATATAAGCTGGAAAG
TGAAAAAGGTAATGGCCAAAAAGGATGGAAATTGAAACAAGTGCAAATAGTGATCAGACA
TGGAGACAGAGCACCTTTGAATTTGAATGTGTACCATAAATTCAGAACCAAAAACCGCTT
TTGTAATATACATTCAAATTTCTACTCTGACACATTAAAATTGGTATCAAATTATAGAAA
TAGCATAATGAAGGATCAAAACTCACAACATTTACCTTATTTCGCACAACCTTTGCCCGA
AGGGATTGTCTGCAGTCCAGGCCAATTAACAGTCATTGGTGCATTACAACATTTACACAA
CGGTTTGATGCTGCGTGAGGCTTACATTCGAAAGCACAAACTGGTAGACCCTGCCACTCA
AGATAAATTTGTCTATGTTCGTTCCACTCATGTTCGACGCACATTTCAAAGTGCTGTTGC
TTTCTTGTATGGCTTTTTACCTAACTATCACCTTCAAGACATTCCAATAACCTTTACAAT
GGGTCCAACATTTTGTGAGAAACACTGTGTGTGCCCAATTGTTAAAACCTTGGAAAAGAA
GGTAAAGAAAACTCAGTACCAAAATTACTTAAAAAGGCAGAGGAACAATCCTATTATAAA
GAATATCTCCAGAATTACTGGAATTGGAGATCACACCGGACCCCTCATGGATTCGTTGGT
AACAGGGTATATCTGCAAGCAAATTCCTTTGCCATGTAATGAAAATGGAGAGTGTGTGGA
GCTATCTGAATTAAATGTTGTAATGAATGAACAAGAATATCTAAACAGAGTTACCCGACT
AGAGTCTCCTGCAAGAAATATATCATTGTTACAAATTCAACCTTTTCTGGAAAATATCAC
CAATCATATGAAACAAGTTGTGGAAGATTCAGCTGCTCAAAGAAAAGCAGTTTTGTATTC
AGGGCATGACCTGACTCTTGCACCATTAATTCAAGCACTAGGCTTGCCAGAATATAGGTG
GCCAAGATTAGCAAGTCGTTTGGTGTTTGAGCTTTGGCAAGCAACAGATGGTATGCACTT
TGTAAAAATTCTTTTCAATGGCGTTGATGTTACCAATGACACTGCTTTTTGTCCAGGTAA
AAACAAGCCATGTTCATATAACTCTTTTATGCAATTCCAAAGGGACATAGGGAAATATTT
TGGATTTGATTCAAGAAGTTCTGTATGCAAAAGCTAATACTGTCCTGCTACAAGTCAATC
AAATGATATGTCTACTGTCTCTTTATTTATTTTATGTACCCAATATTCCATTTGCCATAT
TGACTTTTTTTTCTTCTATTTGCACTTTAGAGTTAGAATTTTTTTACTACGCTGTATCAT
TAACAAATTTAGAATTTTTTTATTAAGCTGTTTCATTAACAGATCTATAATCTTCAAGTG
AAGGAAATTATGTTTTCAAGTGTATTTTTCTGTATTTCCAGTATTGCAGTAAGAAGTAAT
AAAAGTGTTGGACATGCTAAA

InterProScan

Gene3D	His_PPase_superfam (IPR029033) - T[25-411] 6.0E-69
SUPERFAMILY	His_PPase_superfam (IPR029033) - T[36-411] 2.89E-61
Pfam	His_Pase_clade-2 (IPR000560) - T[39-375] 8.5E-25
CDD	His_Pase_clade-2 (IPR000560) - T[39-375] 7.8763E-29
ProSitePatterns	Acid_Pase_AS (IPR033379) - T[40-54] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PXYP1_HUMAN	34.409 %	193	1.38E-56