- Clone 'cieg092j03' >
- Transcript 'KH2012:KH.C10.106.v2...'
Transcript Model
Transcript Id
KH2012:KH.C10.106.v2.A.ND1-1
Possible name(s)
MITF; TFE3; TFEB
Gene model
Location
KhC10 [2,739,657 / 2,757,514]
Amino acid sequence
Length: 571
>KH.C10.106.v2.A.ND1-1
TLLKDLSFYLTCFASVVFTSQKRKQSEKMGSRANMKMQLQRDKALMEEKRLRQASQNAAQ
ASKSSSSSTINMPVVTLTSPPQLPVQVLKVETGLQNPTQYHVRETQRNQVREYISQSHKD
GSKYMVRQLFNPSQSAPTNAGDAFHANSTPASPLARLNLSTDPMTDIIDDIVSLESSFGD
EPRFDRNATTLQTVSPSDLGSFARSSAHSLPVISNETSSSCPVIKREFTEEDARLFAKDR
IKKDNHNIIERRRRYNINDRIRELGHLVPKSSDPELRWNKGSILKAAVDYIQHLQNDQQK
HRALEQRSKQMETMNKKLLLRVQELEMTVQQYGINVDNSEKQGMMNQLLNFNTAPTAGMT
DGMFTAEEEHHVANFPTNAVSPQNRSPGTLTSQTAEIIVYQQPEQVAPGANTNPDQQFLH
QQQQQQQQLLTVDSTIINDQQQPSLSPNHQMQGNFSPANYNQQSPLGSAASSTLSPTHSE
MNMQQQQQQQQQQQTQQQQQEQSNTLNLNLDEVDMTAFQFPANNDADPLTSIMGGGFSSL
LTSEPNQFNDVMMVDDYGLIKDDIFLSDANQ
Nucleotide sequence
Length: 2,382
>KH2012:KH.C10.106.v2.A.ND1-1
TAAGTTAAGAAGCTGGTTAAGTGTTAATACTAGGAGCTGAACTGGTGTAGTGTTTTGCTG
GTTAGAACTTGAACACTTTTAAAAGACCTCAGTTTCTATCTCACTTGTTTTGCATCTGTT
GTGTTCACTTCTCAGAAAAGAAAACAAAGTGAAAAAATGGGTAGTCGCGCTAACATGAAG
ATGCAGTTACAAAGGGACAAGGCCCTTATGGAAGAGAAGAGATTAAGACAAGCTTCACAA
AATGCAGCTCAAGCCTCAAAAAGTTCTTCATCTTCAACTATTAACATGCCAGTTGTAACT
CTAACTTCTCCCCCCCAACTACCTGTACAAGTGCTTAAGGTTGAGACTGGCCTACAGAAC
CCGACCCAATACCATGTTCGTGAAACACAACGTAACCAAGTTCGTGAGTACATCAGTCAG
TCTCATAAAGATGGTTCCAAATACATGGTCCGCCAGCTATTCAACCCTTCGCAAAGCGCT
CCCACCAACGCAGGTGACGCATTCCATGCTAACAGTACACCAGCGAGTCCTCTAGCTCGT
CTCAACTTGTCCACAGACCCGATGACCGACATAATAGACGACATTGTCAGCCTTGAGTCA
AGCTTCGGAGACGAGCCTCGCTTCGACCGTAACGCTACAACTCTCCAAACAGTTTCCCCG
TCTGACCTTGGAAGTTTCGCCCGCTCCTCTGCCCATTCCCTGCCCGTTATCTCCAACGAA
ACGTCCTCATCGTGTCCTGTCATCAAACGTGAGTTTACGGAAGAAGACGCTCGTCTCTTC
GCTAAAGATCGGATCAAGAAGGACAATCACAATATAATTGAGCGGAGACGAAGGTACAAT
ATAAACGATCGAATACGTGAGTTGGGACACCTCGTGCCAAAGTCGTCTGACCCAGAATTG
CGTTGGAATAAAGGTTCCATACTGAAAGCTGCAGTAGATTACATACAGCACTTACAAAAC
GACCAACAGAAACATCGTGCACTTGAACAACGAAGTAAACAAATGGAGACGATGAATAAG
AAGTTACTGTTACGAGTTCAGGAACTCGAAATGACGGTACAACAGTACGGTATTAATGTT
GACAACAGCGAAAAACAAGGCATGATGAACCAGCTTCTTAACTTTAACACCGCCCCGACC
GCGGGCATGACGGACGGGATGTTCACCGCAGAAGAGGAACACCACGTCGCAAATTTCCCC
ACCAACGCCGTCTCGCCCCAGAACAGGTCGCCGGGTACATTAACATCACAAACAGCGGAA
ATAATAGTTTACCAACAGCCAGAGCAGGTAGCACCTGGTGCGAATACGAACCCCGACCAG
CAGTTTTTACACCAACAACAACAACAACAACAACAGTTATTGACGGTCGACTCCACAATC
ATCAACGACCAACAACAGCCAAGTCTCTCCCCTAACCATCAGATGCAGGGTAACTTCTCC
CCTGCTAACTATAACCAGCAATCACCTTTGGGCAGTGCAGCTTCTAGCACTCTCTCGCCA
ACACACAGTGAAATGAACATGCAACAACAACAACAACAGCAACAACAGCAACAAACACAA
CAGCAACAACAAGAACAGTCCAACACGTTAAATTTAAATCTTGACGAAGTAGATATGACA
GCGTTTCAATTTCCCGCAAATAACGATGCCGATCCACTAACCAGTATAATGGGGGGCGGG
TTCAGCTCCTTGCTGACTTCAGAGCCAAATCAGTTTAATGACGTCATGATGGTGGACGAT
TACGGTCTTATAAAAGACGATATATTTCTGTCCGATGCTAACCAGTGATATTAACTGCGT
CTACGAAGCACAAGTCTTCTCTACCAATCAACATGACGCTGTAAGCTGAACAAGGAGCTT
GTAACCTTTCCGTGACACCCGGTTAAATGCCAGTTGCCACTCCAGTTGGCACCTGTGACG
TTTTTTCTTACAAGGAAAAAGATGGTTCAAATTTGCTATAGAGTTCTGTATTAGGGTTTT
AAAGCCATTATCGGCTTTTTTTATACAAGAGTTCTAAATTACAAATCCTAAAAAGCTGAG
ACATACGTTCTGTATGTCGACGTACCTCTTTCTTTTTAAAATCAAGTTTTCTTAAATCCG
TTTTTATTTTTTAACCGATAATCAAATTTTTACGCTTCAATCTAACAGCCGCGCAAATCG
TGACCGAGTTTTTACCAGCGTGGTACTTTGACCAATTCATCTGTACAGTGATGCAATGTT
CCCTGTTCTTAACTAACGCGATGAGTTTTTACAGAAACGCTTTATTTTTCTCATAGCAAT
AGCAGGCCCAATTTTGGTGGCCGCTAACGCGTTGCAATTTCGCCCTTTTTTTATCGAATC
GCTTCGTTTTCGTTAATATTATATTTGCCATACGGAAATCCA
| PANTHER |
TFEB (IPR024098) - T[30-550] 4.7E-128 |
| Pfam |
MiT/TFE_N (IPR031867) - T[32-172] 1.7E-25 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[239-309] 5.63E-17 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[241-294] 16.622 |
| Pfam |
bHLH_dom (IPR011598) - T[242-295] 1.7E-17 |
| CDD |
bHLH_dom (IPR011598) - T[242-299] 3.70778E-16 |
| SMART |
bHLH_dom (IPR011598) - T[247-300] 2.8E-16 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[252-333] 2.9E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TFE3_HUMAN | 45.583 % | 222 | 5.01E-65 |
| TFEB_HUMAN | 42.857 % | 210 | 1.71E-61 |
| MITF_HUMAN | 39.589 % | 205 | 3.29E-59 |