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  1. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.SL17-1

Possible name(s)

FAU; RPS27A; UBB

Location

KhC10 [827,281 / 828,014]

Sequences

Amino acid sequence

Length: 131

>KH.C10.10.v1.A.SL17-1
IFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEAAGLNDL
STVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVAT
FGRRRGPNANS

Nucleotide sequence

Length: 733

>KH2012:KH.C10.10.v1.A.SL17-1
ATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCT
AACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGC
TACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTT
TCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGT
GCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAG
ACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACC
TTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATC
TCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTA
ATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAA
AAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCAT
TGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATG
CTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAA
GAAAAACACAAAG

InterProScan

SMART
Ubiquitin_dom (IPR000626) - T[1-68] 1.0E-8
Pfam
Ubiquitin_dom (IPR000626) - T[1-68] 7.4E-13
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[1-72] 16.472
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[3-86] 9.67E-16
Pfam
Ribosomal_S30 (IPR006846) - T[73-130] 1.7E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 90.1 4.35E-25