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TRANSCRIPT CARD

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  1. Clone 'man27j22' > 
  2. Clone 'ma145l09' > 
  3. Transcript 'KH2012:KH.C10.10.v1....' > 
  4. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  5. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL8-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 827,996]

Sequences

Amino acid sequence

Length: 125

>KH.C10.10.v1.A.nonSL8-1
ELHCVQVDSGDLVSNLKAQINAIEGIATEDQVLSYNGITLDDDLSLEAAGLNDLSTVQVL
GRVLGGKVHGSLARAGKVKGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVATFGRRRG
PNANS

Nucleotide sequence

Length: 715

>KH2012:KH.C10.10.v1.A.nonSL8-1
GAGTTGCACTGCGTGCAGGTCGATAGTGGAGACCTCGTGTCTAACCTAAAGGCCCAAATC
AACGCGATTGAAGGTATCGCAACCGAAGACCAAGTATTAAGCTACAATGGAATTACGTTG
GACGACGATTTGAGCTTGGAAGCTGCTGGTTTAAACGACCTTTCCACTGTTCAAGTTTTG
GGACGCGTACTTGGAGGTAAAGTGCACGGTTCTTTGGCACGTGCTGGTAAAGTGAAGGGT
CAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGAAAAAGAAGACTGGCCGAGCCAAACGT
CGCATGCAATACAACAGGAGATTCGTGAATGTTGTTGCCACCTTTGGTCGTCGACGTGGA
CCAAACGCCAACTCCTAAACTGTTTGTCCAATTTCTGCTATCTCGTGTATGTTGAATCAT
ATGTAAAGTAGCAGATAATAAATAAAAAAACGAAACCACCTAATTATGTCTTTTATCCAA
AACAAAAGCGATTCAGTTTACTATTGTCATGATATCTCTTAAAAACTATTTTGTTACATA
GAACTTCCACTGTAAGATTTCACTGCATGTTTAAACAGTCATTGTATAGTATCTCCATGT
CTACTTATCTTCCTGTACAAAATCCCTGCACAATAATATATGCTTTTACCTAATAACTAT
ATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGTGTATTAAAGAAAAACACAAAG

InterProScan

SMART
Ubiquitin_dom (IPR000626) - T[1-62] 1.1E-4
Pfam
Ubiquitin_dom (IPR000626) - T[3-62] 6.5E-12
SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[3-80] 7.14E-15
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[5-66] 15.253
Pfam
Ribosomal_S30 (IPR006846) - T[67-124] 1.6E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 90.1 3.43E-25