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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1291.v1...' > 
  2. Transcript 'KH2012:KH.C10.10.v1....'

Transcript Model

Transcript Id

KH2012:KH.C10.10.v1.A.nonSL7-1

Possible name(s)

FAU; RPS27A; UBB

Gene model

KH2012:KH.C10.10

Location

KhC10 [827,281 / 828,082]

Sequences

Amino acid sequence

Length: 153

>KH.C10.10.v1.A.nonSL7-1
CCKTIGVYCKPCLKGFNSTNMQIFLKTNELHCVQVDSGDLVSNLKAQINAIEGIATEDQV
LSYNGITLDDDLSLEAAGLNDLSTVQVLGRVLGGKVHGSLARAGKVKGQTPKVEAQEKKK
KKTGRAKRRMQYNRRFVNVVATFGRRRGPNANS

Nucleotide sequence

Length: 801

>KH2012:KH.C10.10.v1.A.nonSL7-1
GTTGTTGTAAAACCATCGGTGTTTATTGTAAACCTTGTTTAAAAGGGTTTAATTCAACCA
ATATGCAGATATTTTTGAAAACAAATGAGTTGCACTGCGTGCAGGTCGATAGTGGAGACC
TCGTGTCTAACCTAAAGGCCCAAATCAACGCGATTGAAGGTATCGCAACCGAAGACCAAG
TATTAAGCTACAATGGAATTACGTTGGACGACGATTTGAGCTTGGAAGCTGCTGGTTTAA
ACGACCTTTCCACTGTTCAAGTTTTGGGACGCGTACTTGGAGGTAAAGTGCACGGTTCTT
TGGCACGTGCTGGTAAAGTGAAGGGTCAAACACCAAAAGTTGAGGCCCAAGAAAAGAAGA
AAAAGAAGACTGGCCGAGCCAAACGTCGCATGCAATACAACAGGAGATTCGTGAATGTTG
TTGCCACCTTTGGTCGTCGACGTGGACCAAACGCCAACTCCTAAACTGTTTGTCCAATTT
CTGCTATCTCGTGTATGTTGAATCATATGTAAAGTAGCAGATAATAAATAAAAAAACGAA
ACCACCTAATTATGTCTTTTATCCAAAACAAAAGCGATTCAGTTTACTATTGTCATGATA
TCTCTTAAAAACTATTTTGTTACATAGAACTTCCACTGTAAGATTTCACTGCATGTTTAA
ACAGTCATTGTATAGTATCTCCATGTCTACTTATCTTCCTGTACAAAATCCCTGCACAAT
AATATATGCTTTTACCTAATAACTATATTCTCAAGAAGTAAACCGGTTATAGGGTTGTGT
GTATTAAAGAAAAACACAAAG

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[15-95] 7.83E-17
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[21-94] 17.234
SMART
Ubiquitin_dom (IPR000626) - T[21-90] 2.7E-12
Pfam
Ubiquitin_dom (IPR000626) - T[23-90] 1.1E-12
Pfam
Ribosomal_S30 (IPR006846) - T[95-152] 2.5E-29

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS30_HUMAN 88.136 % 89.7 1.3E-24
UBIM_HUMAN 41.892 % 67.4 9.15E-16